Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNORA63.2-201ENST00000362603 126 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.94-201ENST00000363068 106 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-824P-201ENST00000363724 104 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.239-201ENST00000364444 113 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 RNU1-141P-201ENST00000364623 158 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 SNORD42B-201ENST00000458893 67 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 SNORA40.17-201ENST00000517256 115 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 MIR4666B-201ENST00000578142 81 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 MIR548AE1-201ENST00000583292 70 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 MIR548O2-201ENST00000616090 70 ntBASIC0.31□□□□□ -2.36
NHLRC1Q6VVB1 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 MIR548U-201ENST00000390728 81 ntBASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 RNA5SP225-201ENST00000410874 135 ntBASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 HMGN2P22-201ENST00000427588 175 ntBASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-1108P-201ENST00000516308 104 ntBASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 NAMPTP3-201ENST00000569273 224 ntBASIC0.3□□□□□ -2.36
NHLRC1Q6VVB1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-161P-201ENST00000363051 106 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-652P-201ENST00000365488 107 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 RNU6V-201ENST00000384105 107 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 MT-TY-201ENST00000387409 66 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.607-201ENST00000410597 98 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 MIR4712-201ENST00000583750 82 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.788-201ENST00000622394 112 ntBASIC0.29□□□□□ -2.36
NHLRC1Q6VVB1 SNORA2A-201ENST00000383885 135 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.426-201ENST00000384068 113 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.437-201ENST00000384113 113 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-1124P-201ENST00000384169 107 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 MIR1255A-201ENST00000408338 113 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
NHLRC1Q6VVB1 MIRLET7A1-201ENST00000362295 80 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 Y_RNA.219-201ENST00000364232 113 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-382P-201ENST00000365181 106 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 MIR501-201ENST00000390204 84 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-1275P-201ENST00000391087 107 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.27□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-495P-201ENST00000362995 107 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-330P-201ENST00000363015 107 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 SNORD78.1-201ENST00000390866 65 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-1177P-201ENST00000391058 104 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-557P-201ENST00000516842 110 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 YWHAEP2-201ENST00000580066 112 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 MIR4473-201ENST00000583731 91 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 U6.81-201ENST00000612550 106 ntBASIC0.26□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-208P-201ENST00000362431 107 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 SNORD115-37-201ENST00000363768 82 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 MIR582-201ENST00000365731 98 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-129P-201ENST00000391022 107 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 SNORD77.2-201ENST00000391045 68 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 U3.27-201ENST00000391237 200 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 SNORD110-201ENST00000408189 75 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 RNU2-59P-201ENST00000410482 191 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 AC006210.1-201ENST00000424882 111 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 SCARNA18B-201ENST00000458806 135 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 AC097510.1-201ENST00000510945 133 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 SNORA72.7-201ENST00000516349 94 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 MIR4460-201ENST00000577862 86 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 AC069503.3-201ENST00000618674 145 ntBASIC0.25□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-990P-201ENST00000364385 104 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-242P-201ENST00000384359 107 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 Y_RNA.606-201ENST00000410579 103 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-1057P-201ENST00000517162 102 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 MIR3925-201ENST00000584674 77 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 AC073869.9-201ENST00000641610 120 ntBASIC0.24□□□□□ -2.37
NHLRC1Q6VVB1 Y_RNA.12-201ENST00000362393 112 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-340P-201ENST00000364005 107 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 Y_RNA.371-201ENST00000365591 113 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 MIR652-201ENST00000385278 98 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-279P-201ENST00000391297 101 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 SNORD75.2-201ENST00000408784 58 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 AC074348.1-201ENST00000426503 132 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 RNU7-74P-201ENST00000459104 62 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 MIR4484-201ENST00000582855 83 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 MIR664A-201ENST00000626086 82 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 MIR499B-201ENST00000636498 73 ntBASIC0.23□□□□□ -2.37
NHLRC1Q6VVB1 RNU5F-1-201ENST00000362507 117 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-315P-201ENST00000362666 107 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-686P-201ENST00000364839 107 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-154P-201ENST00000384306 106 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNU7-24P-201ENST00000458867 62 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNU6-857P-201ENST00000515893 110 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNA5SP285-201ENST00000516619 119 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 MIR4677-201ENST00000584153 80 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 MIR3202-2-201ENST00000635980 79 ntBASIC0.22□□□□□ -2.37
NHLRC1Q6VVB1 RNA5SP128-201ENST00000365305 116 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 256.3 ms