Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC073261.1-201ENST00000429409 121 ntBASIC1.1□□□□□ -2.23
PRPF40BQ6NWY9 RNU6-382P-201ENST00000365181 106 ntBASIC1.09□□□□□ -2.23
PRPF40BQ6NWY9 RNU6V-201ENST00000384105 107 ntBASIC1.09□□□□□ -2.23
PRPF40BQ6NWY9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
PRPF40BQ6NWY9 RNU6-269P-201ENST00000391077 97 ntBASIC1.09□□□□□ -2.23
PRPF40BQ6NWY9 AL109933.3-201ENST00000619095 188 ntBASIC1.09□□□□□ -2.23
PRPF40BQ6NWY9 MIR6828-201ENST00000636181 60 ntBASIC1.09□□□□□ -2.23
PRPF40BQ6NWY9 Y_RNA.258-201ENST00000364613 105 ntBASIC1.08□□□□□ -2.24
PRPF40BQ6NWY9 SNORA8.2-201ENST00000384372 139 ntBASIC1.08□□□□□ -2.24
PRPF40BQ6NWY9 MIR608-201ENST00000384820 100 ntBASIC1.08□□□□□ -2.24
PRPF40BQ6NWY9 SNORD75.2-201ENST00000408784 58 ntBASIC1.08□□□□□ -2.24
PRPF40BQ6NWY9 RNA5SP257-201ENST00000363023 116 ntBASIC1.07□□□□□ -2.24
PRPF40BQ6NWY9 SNORA36.1-201ENST00000363424 132 ntBASIC1.07□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-54P-201ENST00000365563 107 ntBASIC1.07□□□□□ -2.24
PRPF40BQ6NWY9 HAR1A.1-201ENST00000459583 118 ntBASIC1.07□□□□□ -2.24
PRPF40BQ6NWY9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
PRPF40BQ6NWY9 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-330P-201ENST00000363015 107 ntBASIC1.06□□□□□ -2.24
PRPF40BQ6NWY9 RNU1-141P-201ENST00000364623 158 ntBASIC1.06□□□□□ -2.24
PRPF40BQ6NWY9 AL691482.2-201ENST00000457453 84 ntBASIC1.06□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-752P-201ENST00000516376 102 ntBASIC1.06□□□□□ -2.24
PRPF40BQ6NWY9 MIR3675-201ENST00000583661 73 ntBASIC1.06□□□□□ -2.24
PRPF40BQ6NWY9 MIR664A-201ENST00000626086 82 ntBASIC1.06□□□□□ -2.24
PRPF40BQ6NWY9 RNY1P8-201ENST00000383970 114 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 MIR140-201ENST00000385282 100 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 MT-TY-201ENST00000387409 66 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 RNA5SP484-201ENST00000458857 111 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-871P-201ENST00000516122 100 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 MIR6513-201ENST00000621188 64 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 AL162376.1-201ENST00000624117 175 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 AC073869.9-201ENST00000641610 120 ntBASIC1.05□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 MIR154-201ENST00000385243 84 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 AC093423.1-201ENST00000440817 142 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 RNA5SP121-201ENST00000516537 101 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 NAMPTP3-201ENST00000569273 224 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 MIR7107-201ENST00000611489 80 ntBASIC1.04□□□□□ -2.24
PRPF40BQ6NWY9 SNORD114-23-201ENST00000363536 72 ntBASIC1.03□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-587P-201ENST00000391282 106 ntBASIC1.03□□□□□ -2.24
PRPF40BQ6NWY9 RNU6-495P-201ENST00000362995 107 ntBASIC1.02□□□□□ -2.25
PRPF40BQ6NWY9 AC006210.1-201ENST00000424882 111 ntBASIC1.02□□□□□ -2.25
PRPF40BQ6NWY9 RNU7-24P-201ENST00000458867 62 ntBASIC1.02□□□□□ -2.25
PRPF40BQ6NWY9 AC092634.7-201ENST00000621022 103 ntBASIC1.02□□□□□ -2.25
PRPF40BQ6NWY9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PRPF40BQ6NWY9 RNU6-110P-201ENST00000384508 104 ntBASIC1.01□□□□□ -2.25
PRPF40BQ6NWY9 RNU6-1015P-201ENST00000517121 99 ntBASIC1.01□□□□□ -2.25
PRPF40BQ6NWY9 AC010487.4-201ENST00000637027 61 ntBASIC1.01□□□□□ -2.25
PRPF40BQ6NWY9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
PRPF40BQ6NWY9 RNU6-1241P-201ENST00000384536 107 ntBASIC1□□□□□ -2.25
PRPF40BQ6NWY9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1□□□□□ -2.25
PRPF40BQ6NWY9 MIR6509-201ENST00000614603 85 ntBASIC1□□□□□ -2.25
PRPF40BQ6NWY9 AC069503.3-201ENST00000618674 145 ntBASIC1□□□□□ -2.25
PRPF40BQ6NWY9 MIR936-201ENST00000401264 98 ntBASIC0.99□□□□□ -2.25
PRPF40BQ6NWY9 SNORD71-201ENST00000411292 86 ntBASIC0.99□□□□□ -2.25
PRPF40BQ6NWY9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.99□□□□□ -2.25
PRPF40BQ6NWY9 MIR8087-201ENST00000612745 78 ntBASIC0.99□□□□□ -2.25
PRPF40BQ6NWY9 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
PRPF40BQ6NWY9 RNA5SP517-201ENST00000364724 117 ntBASIC0.98□□□□□ -2.25
PRPF40BQ6NWY9 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
PRPF40BQ6NWY9 SNORD45.1-201ENST00000363181 77 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 SNORD114-4-201ENST00000363962 75 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 RNU6-1039P-201ENST00000383931 107 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 MIR508-201ENST00000384857 115 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 SNORD110-201ENST00000408189 75 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
PRPF40BQ6NWY9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
PRPF40BQ6NWY9 RNU6-35P-201ENST00000384530 107 ntBASIC0.96□□□□□ -2.26
PRPF40BQ6NWY9 RNU6-687P-201ENST00000516443 89 ntBASIC0.96□□□□□ -2.26
PRPF40BQ6NWY9 MIR6835-201ENST00000621552 64 ntBASIC0.96□□□□□ -2.26
PRPF40BQ6NWY9 MIR203A-201ENST00000384836 110 ntBASIC0.95□□□□□ -2.26
PRPF40BQ6NWY9 SNORD42B-201ENST00000458893 67 ntBASIC0.95□□□□□ -2.26
PRPF40BQ6NWY9 RNU6-523P-201ENST00000516304 54 ntBASIC0.95□□□□□ -2.26
PRPF40BQ6NWY9 MIR4473-201ENST00000583731 91 ntBASIC0.95□□□□□ -2.26
PRPF40BQ6NWY9 MIR8053-201ENST00000613344 75 ntBASIC0.95□□□□□ -2.26
PRPF40BQ6NWY9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.95□□□□□ -2.26
PRPF40BQ6NWY9 RNU6-895P-201ENST00000384125 103 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 RNU6-604P-201ENST00000390917 100 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 MIR1197-201ENST00000408818 88 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 SNORA40.8-201ENST00000411034 126 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 RNU6-634P-201ENST00000459134 106 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
PRPF40BQ6NWY9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
PRPF40BQ6NWY9 RNA5SP193-201ENST00000410353 107 ntBASIC0.92□□□□□ -2.26
PRPF40BQ6NWY9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
PRPF40BQ6NWY9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.91□□□□□ -2.26
PRPF40BQ6NWY9 AC069271.1-201ENST00000445577 156 ntBASIC0.91□□□□□ -2.26
PRPF40BQ6NWY9 AC018659.1-201ENST00000551083 169 ntBASIC0.91□□□□□ -2.26
PRPF40BQ6NWY9 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
PRPF40BQ6NWY9 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
PRPF40BQ6NWY9 AC114801.3-201ENST00000510231 177 ntBASIC0.9□□□□□ -2.27
PRPF40BQ6NWY9 MIR4711-201ENST00000578274 70 ntBASIC0.9□□□□□ -2.27
PRPF40BQ6NWY9 SNORA70.25-201ENST00000612741 95 ntBASIC0.9□□□□□ -2.27
PRPF40BQ6NWY9 MIR330-201ENST00000362196 94 ntBASIC0.89□□□□□ -2.27
PRPF40BQ6NWY9 SNORD45A-201ENST00000384512 84 ntBASIC0.89□□□□□ -2.27
PRPF40BQ6NWY9 MIR3657-201ENST00000584818 117 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 258.5 ms