Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.73□□□□□ -1.97
NCBP3Q53F19 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NCBP3Q53F19 RNU6-237P-201ENST00000515985 71 ntBASIC2.72□□□□□ -1.97
NCBP3Q53F19 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NCBP3Q53F19 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.71□□□□□ -1.98
NCBP3Q53F19 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NCBP3Q53F19 RNU6-810P-201ENST00000364001 107 ntBASIC2.7□□□□□ -1.98
NCBP3Q53F19 MIR519A2-201ENST00000384990 87 ntBASIC2.7□□□□□ -1.98
NCBP3Q53F19 MIR764-201ENST00000390811 85 ntBASIC2.7□□□□□ -1.98
NCBP3Q53F19 RNA5SP268-201ENST00000516828 124 ntBASIC2.7□□□□□ -1.98
NCBP3Q53F19 SNORA64-201ENST00000384674 134 ntBASIC2.69□□□□□ -1.98
NCBP3Q53F19 SNORA40B-201ENST00000385573 128 ntBASIC2.69□□□□□ -1.98
NCBP3Q53F19 SNORA36.1-201ENST00000363424 132 ntBASIC2.68□□□□□ -1.98
NCBP3Q53F19 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NCBP3Q53F19 SNORD124-201ENST00000459577 104 ntBASIC2.68□□□□□ -1.98
NCBP3Q53F19 RNA5SP99-201ENST00000364020 114 ntBASIC2.67□□□□□ -1.98
NCBP3Q53F19 MIR548F3-201ENST00000408509 87 ntBASIC2.67□□□□□ -1.98
NCBP3Q53F19 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.67□□□□□ -1.98
NCBP3Q53F19 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NCBP3Q53F19 RPS29P23-201ENST00000458635 123 ntBASIC2.66□□□□□ -1.98
NCBP3Q53F19 snoU13.23-201ENST00000458863 104 ntBASIC2.65□□□□□ -1.99
NCBP3Q53F19 AC025627.3-201ENST00000582078 182 ntBASIC2.64□□□□□ -1.99
NCBP3Q53F19 SNORA70.25-201ENST00000612741 95 ntBASIC2.64□□□□□ -1.99
NCBP3Q53F19 MIR18A-201ENST00000362310 71 ntBASIC2.63□□□□□ -1.99
NCBP3Q53F19 SNORD114-1-201ENST00000362705 72 ntBASIC2.63□□□□□ -1.99
NCBP3Q53F19 RNU6-246P-201ENST00000384702 107 ntBASIC2.63□□□□□ -1.99
NCBP3Q53F19 RNU6-172P-201ENST00000411000 93 ntBASIC2.63□□□□□ -1.99
NCBP3Q53F19 AC243829.3-201ENST00000622177 108 ntBASIC2.63□□□□□ -1.99
NCBP3Q53F19 MIR7107-201ENST00000611489 80 ntBASIC2.62□□□□□ -1.99
NCBP3Q53F19 AP000553.5-201ENST00000641933 54 ntBASIC2.62□□□□□ -1.99
NCBP3Q53F19 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NCBP3Q53F19 MIR200A-201ENST00000384875 90 ntBASIC2.61□□□□□ -1.99
NCBP3Q53F19 RNU6-717P-201ENST00000459076 104 ntBASIC2.61□□□□□ -1.99
NCBP3Q53F19 AC011195.1-201ENST00000578177 177 ntBASIC2.61□□□□□ -1.99
NCBP3Q53F19 RNA5SP160-201ENST00000364866 120 ntBASIC2.6□□□□□ -1.99
NCBP3Q53F19 MIR19B1-201ENST00000384829 87 ntBASIC2.6□□□□□ -1.99
NCBP3Q53F19 RNA5SP182-201ENST00000516064 82 ntBASIC2.6□□□□□ -1.99
NCBP3Q53F19 MIR4752-201ENST00000579672 72 ntBASIC2.59□□□□□ -1.99
NCBP3Q53F19 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
NCBP3Q53F19 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
NCBP3Q53F19 SNORD1B-201ENST00000363091 84 ntBASIC2.57□□□□□ -2
NCBP3Q53F19 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.57□□□□□ -2
NCBP3Q53F19 MIR548AG1-201ENST00000579932 66 ntBASIC2.57□□□□□ -2
NCBP3Q53F19 MIR20A-201ENST00000362279 71 ntBASIC2.56□□□□□ -2
NCBP3Q53F19 RNA5SP338-201ENST00000410495 85 ntBASIC2.56□□□□□ -2
NCBP3Q53F19 AC244090.1-201ENST00000441884 93 ntBASIC2.56□□□□□ -2
NCBP3Q53F19 SNORD26-201ENST00000384147 75 ntBASIC2.55□□□□□ -2
NCBP3Q53F19 MIR545-201ENST00000385085 106 ntBASIC2.55□□□□□ -2
NCBP3Q53F19 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.55□□□□□ -2
NCBP3Q53F19 RNA5SP94-201ENST00000516917 108 ntBASIC2.55□□□□□ -2
NCBP3Q53F19 MIR4255-201ENST00000579351 72 ntBASIC2.55□□□□□ -2
NCBP3Q53F19 Y_RNA.783-201ENST00000613546 102 ntBASIC2.55□□□□□ -2
NCBP3Q53F19 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NCBP3Q53F19 Y_RNA.109-201ENST00000363215 102 ntBASIC2.54□□□□□ -2
NCBP3Q53F19 SNORD99-201ENST00000408612 74 ntBASIC2.54□□□□□ -2
NCBP3Q53F19 HMGN2P22-201ENST00000427588 175 ntBASIC2.54□□□□□ -2
NCBP3Q53F19 AL353997.5-201ENST00000618886 171 ntBASIC2.54□□□□□ -2
NCBP3Q53F19 RNU6-482P-201ENST00000391068 107 ntBASIC2.53□□□□□ -2
NCBP3Q53F19 MIR4490-201ENST00000582647 84 ntBASIC2.52□□□□□ -2.01
NCBP3Q53F19 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NCBP3Q53F19 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
NCBP3Q53F19 RNU6-838P-201ENST00000363399 108 ntBASIC2.51□□□□□ -2.01
NCBP3Q53F19 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NCBP3Q53F19 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.5□□□□□ -2.01
NCBP3Q53F19 RNA5SP458-201ENST00000516188 119 ntBASIC2.49□□□□□ -2.01
NCBP3Q53F19 RNA5SP364-201ENST00000516938 78 ntBASIC2.49□□□□□ -2.01
NCBP3Q53F19 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NCBP3Q53F19 SNORD115-25-201ENST00000362619 82 ntBASIC2.48□□□□□ -2.01
NCBP3Q53F19 RNU6-337P-201ENST00000391243 106 ntBASIC2.48□□□□□ -2.01
NCBP3Q53F19 MIR3122-201ENST00000577243 73 ntBASIC2.48□□□□□ -2.01
NCBP3Q53F19 RNU6-997P-201ENST00000384725 107 ntBASIC2.47□□□□□ -2.01
NCBP3Q53F19 RNA5SP255-201ENST00000516370 107 ntBASIC2.47□□□□□ -2.01
NCBP3Q53F19 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.47□□□□□ -2.01
NCBP3Q53F19 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
NCBP3Q53F19 MIR429-201ENST00000362106 83 ntBASIC2.46□□□□□ -2.02
NCBP3Q53F19 MIR26B-201ENST00000362251 77 ntBASIC2.46□□□□□ -2.02
NCBP3Q53F19 RNU4-45P-201ENST00000365469 141 ntBASIC2.46□□□□□ -2.02
NCBP3Q53F19 RNU6-295P-201ENST00000516901 104 ntBASIC2.46□□□□□ -2.02
NCBP3Q53F19 RNU7-154P-201ENST00000516194 62 ntBASIC2.45□□□□□ -2.02
NCBP3Q53F19 SNORD114-24-201ENST00000365029 72 ntBASIC2.44□□□□□ -2.02
NCBP3Q53F19 MIR6773-201ENST00000612812 74 ntBASIC2.44□□□□□ -2.02
NCBP3Q53F19 MIR583-201ENST00000384846 75 ntBASIC2.43□□□□□ -2.02
NCBP3Q53F19 SNORD2-201ENST00000459163 69 ntBASIC2.43□□□□□ -2.02
NCBP3Q53F19 RNU6-419P-201ENST00000517030 63 ntBASIC2.43□□□□□ -2.02
NCBP3Q53F19 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NCBP3Q53F19 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NCBP3Q53F19 RNU6-458P-201ENST00000384179 107 ntBASIC2.41□□□□□ -2.02
NCBP3Q53F19 RNA5SP222-201ENST00000411039 105 ntBASIC2.41□□□□□ -2.02
NCBP3Q53F19 U6.58-201ENST00000613107 107 ntBASIC2.41□□□□□ -2.02
NCBP3Q53F19 RNY1P8-201ENST00000383970 114 ntBASIC2.4□□□□□ -2.03
NCBP3Q53F19 MIR9-3-201ENST00000385084 90 ntBASIC2.4□□□□□ -2.03
NCBP3Q53F19 AL603825.1-201ENST00000438481 80 ntBASIC2.4□□□□□ -2.03
NCBP3Q53F19 Y_RNA.338-201ENST00000365320 114 ntBASIC2.39□□□□□ -2.03
NCBP3Q53F19 MIR579-201ENST00000385221 98 ntBASIC2.39□□□□□ -2.03
NCBP3Q53F19 RNA5SP470-201ENST00000516463 106 ntBASIC2.39□□□□□ -2.03
NCBP3Q53F19 MIR6845-201ENST00000613182 61 ntBASIC2.39□□□□□ -2.03
NCBP3Q53F19 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.39□□□□□ -2.03
NCBP3Q53F19 SNORA16.1-201ENST00000364597 132 ntBASIC2.38□□□□□ -2.03
NCBP3Q53F19 SNORD114-29-201ENST00000364819 70 ntBASIC2.38□□□□□ -2.03
NCBP3Q53F19 SNORD48-201ENST00000364953 64 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms