Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SNORD45B-201ENST00000364617 72 ntBASIC-0.85□□□□□ -2.55
SRP54P61011 SNORA63.6-201ENST00000364921 119 ntBASIC-0.85□□□□□ -2.55
SRP54P61011 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.85□□□□□ -2.55
SRP54P61011 MIR548Z-201ENST00000584743 97 ntBASIC-0.85□□□□□ -2.55
SRP54P61011 MIR6854-201ENST00000614935 69 ntBASIC-0.85□□□□□ -2.55
SRP54P61011 MIR3914-2-201ENST00000637339 95 ntBASIC-0.85□□□□□ -2.55
SRP54P61011 RNU6-990P-201ENST00000364385 104 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 SNORD115-23-201ENST00000364461 82 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIRLET7B-201ENST00000385140 83 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIR548U-201ENST00000390728 81 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 SNORD90-201ENST00000391145 111 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 SNORD22.1-201ENST00000516331 125 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIR3179-1-201ENST00000578940 84 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIR3179-2-201ENST00000579107 84 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIR3179-3-201ENST00000579566 84 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIR4777-201ENST00000583710 86 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 MIR3179-4-201ENST00000617599 84 ntBASIC-0.86□□□□□ -2.55
SRP54P61011 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.87□□□□□ -2.55
SRP54P61011 MIR548A1-201ENST00000385041 97 ntBASIC-0.87□□□□□ -2.55
SRP54P61011 RNA5SP292-201ENST00000390974 118 ntBASIC-0.87□□□□□ -2.55
SRP54P61011 SNORD33.1-201ENST00000516213 88 ntBASIC-0.87□□□□□ -2.55
SRP54P61011 RNU6-971P-201ENST00000516920 106 ntBASIC-0.87□□□□□ -2.55
SRP54P61011 RNU4-36P-201ENST00000364294 144 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 RNU7-24P-201ENST00000458867 62 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 RNU6-346P-201ENST00000516288 111 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.88□□□□□ -2.55
SRP54P61011 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.89□□□□□ -2.55
SRP54P61011 RNU6-905P-201ENST00000384434 107 ntBASIC-0.89□□□□□ -2.55
SRP54P61011 RNU6-795P-201ENST00000516323 103 ntBASIC-0.89□□□□□ -2.55
SRP54P61011 AC012531.4-201ENST00000616509 177 ntBASIC-0.89□□□□□ -2.55
SRP54P61011 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.9□□□□□ -2.55
SRP54P61011 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.9□□□□□ -2.55
SRP54P61011 RNU6-30P-201ENST00000384561 107 ntBASIC-0.9□□□□□ -2.55
SRP54P61011 SNORD75.2-201ENST00000408784 58 ntBASIC-0.9□□□□□ -2.55
SRP54P61011 AL500527.2-201ENST00000454105 95 ntBASIC-0.9□□□□□ -2.55
SRP54P61011 RNU6-255P-201ENST00000516957 105 ntBASIC-0.9□□□□□ -2.55
SRP54P61011 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 SNORD74.6-201ENST00000364796 70 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 RNY1P7-201ENST00000384743 110 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 MIR196A1-201ENST00000388006 70 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 RNU6-62P-201ENST00000516526 102 ntBASIC-0.91□□□□□ -2.56
SRP54P61011 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 RNY1P5-201ENST00000383890 115 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 RNU6-519P-201ENST00000410590 108 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 SNORA18.5-201ENST00000516616 101 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 AC090617.8-201ENST00000623339 167 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 snoR1.1-201ENST00000628177 80 ntBASIC-0.92□□□□□ -2.56
SRP54P61011 SNORD114-25-201ENST00000363742 72 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 RNU6-80P-201ENST00000384195 107 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 MIR517B-201ENST00000385102 67 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 AP000533.3-201ENST00000447704 118 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.93□□□□□ -2.56
SRP54P61011 AC022137.1-201ENST00000483735 151 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 AC021146.9-201ENST00000512503 156 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 RNU6-659P-201ENST00000516454 104 ntBASIC-0.93□□□□□ -2.56
SRP54P61011 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.93□□□□□ -2.56
SRP54P61011 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.94□□□□□ -2.56
SRP54P61011 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.94□□□□□ -2.56
SRP54P61011 MIR548A3-201ENST00000385297 97 ntBASIC-0.94□□□□□ -2.56
SRP54P61011 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
SRP54P61011 YWHAEP3-201ENST00000582767 121 ntBASIC-0.94□□□□□ -2.56
SRP54P61011 RNU6-382P-201ENST00000365181 106 ntBASIC-0.95□□□□□ -2.56
SRP54P61011 SNORA19.1-201ENST00000410656 129 ntBASIC-0.95□□□□□ -2.56
SRP54P61011 U6.95-201ENST00000636931 70 ntBASIC-0.95□□□□□ -2.56
SRP54P61011 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.96□□□□□ -2.56
SRP54P61011 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
SRP54P61011 SCARNA17-201ENST00000516183 144 ntBASIC-0.96□□□□□ -2.56
SRP54P61011 RNU6-824P-201ENST00000363724 104 ntBASIC-0.97□□□□□ -2.56
SRP54P61011 RNU6-431P-201ENST00000383874 107 ntBASIC-0.97□□□□□ -2.56
SRP54P61011 SNORD58A-201ENST00000383875 65 ntBASIC-0.97□□□□□ -2.56
SRP54P61011 snoU13.17-201ENST00000458802 104 ntBASIC-0.97□□□□□ -2.56
SRP54P61011 U6.96-201ENST00000636425 70 ntBASIC-0.97□□□□□ -2.56
SRP54P61011 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.98□□□□□ -2.57
SRP54P61011 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.98□□□□□ -2.57
SRP54P61011 MIR548I1-201ENST00000408810 149 ntBASIC-0.98□□□□□ -2.57
SRP54P61011 RNU6-904P-201ENST00000516206 101 ntBASIC-0.98□□□□□ -2.57
SRP54P61011 MIR4464-201ENST00000580818 92 ntBASIC-0.98□□□□□ -2.57
SRP54P61011 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.98□□□□□ -2.57
SRP54P61011 RNU6-260P-201ENST00000384092 107 ntBASIC-0.99□□□□□ -2.57
SRP54P61011 MTATP6P29-201ENST00000415057 132 ntBASIC-0.99□□□□□ -2.57
SRP54P61011 SCARNA23-201ENST00000516060 130 ntBASIC-0.99□□□□□ -2.57
SRP54P61011 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.99□□□□□ -2.57
SRP54P61011 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
SRP54P61011 AC006254.2-201ENST00000603259 279 ntBASIC-0.99□□□□□ -2.57
SRP54P61011 RNU4-32P-201ENST00000363404 141 ntBASIC-1□□□□□ -2.57
SRP54P61011 SNORD64-201ENST00000386683 67 ntBASIC-1□□□□□ -2.57
SRP54P61011 AC026421.1-201ENST00000519101 163 ntBASIC-1□□□□□ -2.57
SRP54P61011 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.01□□□□□ -2.57
SRP54P61011 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.01□□□□□ -2.57
SRP54P61011 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms