Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP000533.3-201ENST00000447704 118 ntBASIC-1.05□□□□□ -2.58
VSX2P58304 RNU6-388P-201ENST00000517012 105 ntBASIC-1.05□□□□□ -2.58
VSX2P58304 RNU6-389P-201ENST00000517048 105 ntBASIC-1.05□□□□□ -2.58
VSX2P58304 MIR3144-201ENST00000579460 79 ntBASIC-1.05□□□□□ -2.58
VSX2P58304 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.06□□□□□ -2.58
VSX2P58304 RNU6-832P-201ENST00000363319 107 ntBASIC-1.06□□□□□ -2.58
VSX2P58304 RNU4-32P-201ENST00000363404 141 ntBASIC-1.06□□□□□ -2.58
VSX2P58304 RNU6-905P-201ENST00000384434 107 ntBASIC-1.06□□□□□ -2.58
VSX2P58304 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.06□□□□□ -2.58
VSX2P58304 AL035470.1-201ENST00000622571 220 ntBASIC-1.06□□□□□ -2.58
VSX2P58304 RNU6-495P-201ENST00000362995 107 ntBASIC-1.07□□□□□ -2.58
VSX2P58304 RNU6-990P-201ENST00000364385 104 ntBASIC-1.07□□□□□ -2.58
VSX2P58304 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.07□□□□□ -2.58
VSX2P58304 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
VSX2P58304 AC140658.3-201ENST00000567603 271 ntBASIC-1.07□□□□□ -2.58
VSX2P58304 MIR4694-201ENST00000578534 80 ntBASIC-1.07□□□□□ -2.58
VSX2P58304 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
VSX2P58304 RNU6-592P-201ENST00000411333 103 ntBASIC-1.08□□□□□ -2.58
VSX2P58304 RNA5SP461-201ENST00000516451 104 ntBASIC-1.08□□□□□ -2.58
VSX2P58304 MTND5P41-201ENST00000517498 206 ntBASIC-1.08□□□□□ -2.58
VSX2P58304 MIR4306-201ENST00000583390 91 ntBASIC-1.08□□□□□ -2.58
VSX2P58304 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.09□□□□□ -2.58
VSX2P58304 SNORA63.2-201ENST00000362603 126 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 SNORA24B-201ENST00000384176 131 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 MIRLET7B-201ENST00000385140 83 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 SNORD90-201ENST00000391145 111 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 MIR3064-201ENST00000581130 66 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 snoR1.1-201ENST00000628177 80 ntBASIC-1.1□□□□□ -2.59
VSX2P58304 RNY3P2-201ENST00000362918 102 ntBASIC-1.11□□□□□ -2.59
VSX2P58304 SNORD115-23-201ENST00000364461 82 ntBASIC-1.11□□□□□ -2.59
VSX2P58304 SNORA63.6-201ENST00000364921 119 ntBASIC-1.11□□□□□ -2.59
VSX2P58304 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.11□□□□□ -2.59
VSX2P58304 RNU6-426P-201ENST00000516464 97 ntBASIC-1.11□□□□□ -2.59
VSX2P58304 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.12□□□□□ -2.59
VSX2P58304 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.12□□□□□ -2.59
VSX2P58304 SNORD4B-201ENST00000459083 72 ntBASIC-1.12□□□□□ -2.59
VSX2P58304 AC068339.1-201ENST00000526965 141 ntBASIC-1.12□□□□□ -2.59
VSX2P58304 AC103810.7-201ENST00000607821 91 ntBASIC-1.12□□□□□ -2.59
VSX2P58304 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.13□□□□□ -2.59
VSX2P58304 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.13□□□□□ -2.59
VSX2P58304 MTND4LP9-201ENST00000427694 174 ntBASIC-1.13□□□□□ -2.59
VSX2P58304 MIR4679-2-201ENST00000578358 77 ntBASIC-1.13□□□□□ -2.59
VSX2P58304 MIR548Z-201ENST00000584743 97 ntBASIC-1.13□□□□□ -2.59
VSX2P58304 AC090617.8-201ENST00000623339 167 ntBASIC-1.13□□□□□ -2.59
VSX2P58304 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.14□□□□□ -2.59
VSX2P58304 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 RNA5SP292-201ENST00000390974 118 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 RNU6-644P-201ENST00000391155 98 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 RNU6-772P-201ENST00000516042 105 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 AC104996.3-201ENST00000590718 94 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 MIR4320-201ENST00000636981 65 ntBASIC-1.15□□□□□ -2.59
VSX2P58304 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 RNU6-813P-201ENST00000384691 107 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 MIR124-2-201ENST00000385081 109 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.16□□□□□ -2.6
VSX2P58304 AL157777.2-201ENST00000258070 137 ntBASIC-1.17□□□□□ -2.6
VSX2P58304 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.17□□□□□ -2.6
VSX2P58304 MIR548U-201ENST00000390728 81 ntBASIC-1.17□□□□□ -2.6
VSX2P58304 RNU7-107P-201ENST00000459121 61 ntBASIC-1.17□□□□□ -2.6
VSX2P58304 SNORD18.2-201ENST00000459604 70 ntBASIC-1.17□□□□□ -2.6
VSX2P58304 MIR4439-201ENST00000583746 80 ntBASIC-1.17□□□□□ -2.6
VSX2P58304 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.18□□□□□ -2.6
VSX2P58304 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
VSX2P58304 RNU6-706P-201ENST00000517229 104 ntBASIC-1.18□□□□□ -2.6
VSX2P58304 YWHAEP3-201ENST00000582767 121 ntBASIC-1.18□□□□□ -2.6
VSX2P58304 MIR4777-201ENST00000583710 86 ntBASIC-1.18□□□□□ -2.6
VSX2P58304 RNU6-226P-201ENST00000363778 107 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 RNU7-24P-201ENST00000458867 62 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 AC021146.9-201ENST00000512503 156 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 RNU6-479P-201ENST00000516348 105 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 snoU83B.1-201ENST00000517136 88 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 AC026421.1-201ENST00000519101 163 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 MIR5009-201ENST00000578736 100 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.19□□□□□ -2.6
VSX2P58304 U6.96-201ENST00000636425 70 ntBASIC-1.19□□□□□ -2.6
VSX2P58304 RNU6-208P-201ENST00000362431 107 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 SNORD45B-201ENST00000364617 72 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 MIR548A1-201ENST00000385041 97 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 SNORD75.2-201ENST00000408784 58 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 SNX3P1X-201ENST00000414887 175 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 RNU6-795P-201ENST00000516323 103 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 SNORA18.5-201ENST00000516616 101 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 AC138207.3-201ENST00000585289 166 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.2□□□□□ -2.6
VSX2P58304 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.2□□□□□ -2.6
VSX2P58304 RNU6-257P-201ENST00000410238 98 ntBASIC-1.21□□□□□ -2.6
VSX2P58304 RNU7-134P-201ENST00000458997 64 ntBASIC-1.21□□□□□ -2.6
VSX2P58304 AC012531.4-201ENST00000616509 177 ntBASIC-1.21□□□□□ -2.6
VSX2P58304 AC132825.6-201ENST00000638861 357 ntBASIC-1.21□□□□□ -2.6
VSX2P58304 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms