Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SNORA32.3-201ENST00000384772 121 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 SNORA13-201ENST00000458790 133 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 RNU6-62P-201ENST00000516526 102 ntBASIC-0.65□□□□□ -2.51
LIM2P55344 RNU6-502P-201ENST00000362419 108 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 RNU6-973P-201ENST00000364690 107 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 RNU6-519P-201ENST00000410590 108 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 snoU13.13-201ENST00000458842 104 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 MIR548Z-201ENST00000584743 97 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 MIR6851-201ENST00000617060 67 ntBASIC-0.66□□□□□ -2.52
LIM2P55344 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 SNORA24B-201ENST00000384176 131 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 MIR548I1-201ENST00000408810 149 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 RNU7-24P-201ENST00000458867 62 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 RNA5SP476-201ENST00000516613 103 ntBASIC-0.67□□□□□ -2.52
LIM2P55344 SNORD95.1-201ENST00000364099 68 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNY4P3-201ENST00000365254 95 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 SNORD116-21-201ENST00000384507 92 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNU6-972P-201ENST00000391208 107 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 SCARNA23-201ENST00000516060 130 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNU6-795P-201ENST00000516323 103 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 MIR3140-201ENST00000583685 90 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 AC012531.4-201ENST00000616509 177 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
LIM2P55344 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-476P-201ENST00000384726 107 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 MIR204-201ENST00000385200 110 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 snoU13.19-201ENST00000459148 104 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-904P-201ENST00000516206 101 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 MIR3671-201ENST00000580455 88 ntBASIC-0.69□□□□□ -2.52
LIM2P55344 RNU6-704P-201ENST00000364162 103 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORA63.6-201ENST00000364921 119 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORD58A-201ENST00000383875 65 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 RNU6-209P-201ENST00000384118 107 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORD75.1-201ENST00000408373 60 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 RNA5SP169-201ENST00000517268 117 ntBASIC-0.7□□□□□ -2.52
LIM2P55344 SNORD75.2-201ENST00000408784 58 ntBASIC-0.71□□□□□ -2.52
LIM2P55344 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.71□□□□□ -2.52
LIM2P55344 AC097510.1-201ENST00000510945 133 ntBASIC-0.71□□□□□ -2.52
LIM2P55344 AC021146.6-201ENST00000514659 117 ntBASIC-0.71□□□□□ -2.52
LIM2P55344 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.71□□□□□ -2.52
LIM2P55344 RNU6-746P-201ENST00000384112 109 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 SNORA3B-201ENST00000391305 131 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 RNU6-887P-201ENST00000410660 100 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 MTATP6P29-201ENST00000415057 132 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 SNORA18.5-201ENST00000516616 101 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 MIR3133-201ENST00000583157 78 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 MIR6773-201ENST00000612812 74 ntBASIC-0.72□□□□□ -2.52
LIM2P55344 RNA5SP292-201ENST00000390974 118 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.73□□□□□ -2.53
LIM2P55344 HAR1A.1-201ENST00000459583 118 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 SNORD38.3-201ENST00000516599 73 ntBASIC-0.73□□□□□ -2.53
LIM2P55344 SNORD116-10-201ENST00000363791 102 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 MIR518B-201ENST00000385127 83 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 MIR3668-201ENST00000582138 75 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 AC006254.2-201ENST00000603259 279 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.75□□□□□ -2.53
LIM2P55344 RNU6-959P-201ENST00000384671 107 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 MIR1302-5-201ENST00000408164 150 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 SNORA19.1-201ENST00000410656 129 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 MIR6854-201ENST00000614935 69 ntBASIC-0.76□□□□□ -2.53
LIM2P55344 SNORD74.6-201ENST00000364796 70 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 MIRLET7B-201ENST00000385140 83 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-337P-201ENST00000391243 106 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-592P-201ENST00000411333 103 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-537P-201ENST00000517277 103 ntBASIC-0.77□□□□□ -2.53
LIM2P55344 RNU6-990P-201ENST00000364385 104 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 SNORD115-23-201ENST00000364461 82 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
LIM2P55344 SNORD90-201ENST00000391145 111 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 AC008267.6-201ENST00000441664 139 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 snoR1.1-201ENST00000628177 80 ntBASIC-0.78□□□□□ -2.53
LIM2P55344 RNU5F-1-201ENST00000362507 117 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 RNU4-63P-201ENST00000411313 118 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 MIR5704-201ENST00000584029 77 ntBASIC-0.79□□□□□ -2.54
LIM2P55344 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.79□□□□□ -2.54
LIM2P55344 RNU6-774P-201ENST00000363238 107 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 RNU4-32P-201ENST00000363404 141 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 RNU6-382P-201ENST00000365181 106 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 RNU6-81P-201ENST00000365608 104 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MT-TQ-201ENST00000387372 72 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 AC021146.9-201ENST00000512503 156 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 AC026421.1-201ENST00000519101 163 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-1-201ENST00000578940 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-2-201ENST00000579107 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-3-201ENST00000579566 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 MIR3179-4-201ENST00000617599 84 ntBASIC-0.8□□□□□ -2.54
LIM2P55344 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms