Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-1232P-201ENST00000516299 86 ntBASIC0.31□□□□□ -2.36
PMS2P54278 MIR760-201ENST00000390220 80 ntBASIC0.3□□□□□ -2.36
PMS2P54278 RNA5SP63-201ENST00000391225 112 ntBASIC0.3□□□□□ -2.36
PMS2P54278 RNU6-1052P-201ENST00000411398 104 ntBASIC0.3□□□□□ -2.36
PMS2P54278 RNU6-719P-201ENST00000516671 104 ntBASIC0.3□□□□□ -2.36
PMS2P54278 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.3□□□□□ -2.36
PMS2P54278 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
PMS2P54278 YWHAEP2-201ENST00000580066 112 ntBASIC0.3□□□□□ -2.36
PMS2P54278 MIR548AD-201ENST00000584780 82 ntBASIC0.3□□□□□ -2.36
PMS2P54278 AC006160.2-201ENST00000637708 154 ntBASIC0.3□□□□□ -2.36
PMS2P54278 RNU6-979P-201ENST00000383896 107 ntBASIC0.29□□□□□ -2.36
PMS2P54278 MIR501-201ENST00000390204 84 ntBASIC0.29□□□□□ -2.36
PMS2P54278 AC006254.2-201ENST00000603259 279 ntBASIC0.29□□□□□ -2.36
PMS2P54278 SNORA9.1-201ENST00000362412 131 ntBASIC0.28□□□□□ -2.36
PMS2P54278 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
PMS2P54278 RNU6V-201ENST00000384105 107 ntBASIC0.28□□□□□ -2.36
PMS2P54278 Y_RNA.611-201ENST00000410682 108 ntBASIC0.28□□□□□ -2.36
PMS2P54278 snoU13.17-201ENST00000458802 104 ntBASIC0.28□□□□□ -2.36
PMS2P54278 RNU7-24P-201ENST00000458867 62 ntBASIC0.28□□□□□ -2.36
PMS2P54278 MIR5588-201ENST00000581890 63 ntBASIC0.28□□□□□ -2.36
PMS2P54278 RNU5F-1-201ENST00000362507 117 ntBASIC0.27□□□□□ -2.37
PMS2P54278 RNU6-495P-201ENST00000362995 107 ntBASIC0.27□□□□□ -2.37
PMS2P54278 Y_RNA.437-201ENST00000384113 113 ntBASIC0.27□□□□□ -2.37
PMS2P54278 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
PMS2P54278 RNU6-1177P-201ENST00000391058 104 ntBASIC0.27□□□□□ -2.37
PMS2P54278 RNU7-171P-201ENST00000459581 62 ntBASIC0.27□□□□□ -2.37
PMS2P54278 AC097510.1-201ENST00000510945 133 ntBASIC0.27□□□□□ -2.37
PMS2P54278 RNU5B-6P-201ENST00000516765 68 ntBASIC0.27□□□□□ -2.37
PMS2P54278 MIR4677-201ENST00000584153 80 ntBASIC0.27□□□□□ -2.37
PMS2P54278 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
PMS2P54278 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
PMS2P54278 Y_RNA.426-201ENST00000384068 113 ntBASIC0.26□□□□□ -2.37
PMS2P54278 Y_RNA.607-201ENST00000410597 98 ntBASIC0.26□□□□□ -2.37
PMS2P54278 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
PMS2P54278 RNU6-557P-201ENST00000516842 110 ntBASIC0.26□□□□□ -2.37
PMS2P54278 uc_338.10-201ENST00000621872 182 ntBASIC0.26□□□□□ -2.37
PMS2P54278 SNORD73B-201ENST00000364394 72 ntBASIC0.25□□□□□ -2.37
PMS2P54278 Y_RNA.407-201ENST00000383986 113 ntBASIC0.25□□□□□ -2.37
PMS2P54278 RNU6-1152P-201ENST00000384576 107 ntBASIC0.25□□□□□ -2.37
PMS2P54278 RNU6-592P-201ENST00000411333 103 ntBASIC0.25□□□□□ -2.37
PMS2P54278 Y_RNA.660-201ENST00000516002 120 ntBASIC0.25□□□□□ -2.37
PMS2P54278 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
PMS2P54278 RNU6-762P-201ENST00000517107 102 ntBASIC0.25□□□□□ -2.37
PMS2P54278 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
PMS2P54278 Y_RNA.73-201ENST00000362910 113 ntBASIC0.24□□□□□ -2.37
PMS2P54278 Y_RNA.264-201ENST00000364665 102 ntBASIC0.24□□□□□ -2.37
PMS2P54278 RNU6-54P-201ENST00000365563 107 ntBASIC0.24□□□□□ -2.37
PMS2P54278 RNU6-35P-201ENST00000384530 107 ntBASIC0.24□□□□□ -2.37
PMS2P54278 Y_RNA.606-201ENST00000410579 103 ntBASIC0.24□□□□□ -2.37
PMS2P54278 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.24□□□□□ -2.37
PMS2P54278 RNA5SP395-201ENST00000516567 118 ntBASIC0.24□□□□□ -2.37
PMS2P54278 RNU6-161P-201ENST00000363051 106 ntBASIC0.23□□□□□ -2.37
PMS2P54278 RNU6-652P-201ENST00000365488 107 ntBASIC0.23□□□□□ -2.37
PMS2P54278 RNU6-127P-201ENST00000390897 107 ntBASIC0.23□□□□□ -2.37
PMS2P54278 SNORD77.2-201ENST00000391045 68 ntBASIC0.23□□□□□ -2.37
PMS2P54278 SNORD75.2-201ENST00000408784 58 ntBASIC0.23□□□□□ -2.37
PMS2P54278 AC022137.1-201ENST00000483735 151 ntBASIC0.23□□□□□ -2.37
PMS2P54278 RNA5SP285-201ENST00000516619 119 ntBASIC0.23□□□□□ -2.37
PMS2P54278 MIR548AE1-201ENST00000583292 70 ntBASIC0.23□□□□□ -2.37
PMS2P54278 MIR3925-201ENST00000584674 77 ntBASIC0.23□□□□□ -2.37
PMS2P54278 AC062037.1-201ENST00000605302 128 ntBASIC0.23□□□□□ -2.37
PMS2P54278 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
PMS2P54278 MIR499B-201ENST00000636498 73 ntBASIC0.23□□□□□ -2.37
PMS2P54278 MIR494-201ENST00000349529 81 ntBASIC0.22□□□□□ -2.37
PMS2P54278 SNORD114-4-201ENST00000363962 75 ntBASIC0.22□□□□□ -2.37
PMS2P54278 MIR1302-4-201ENST00000408701 150 ntBASIC0.22□□□□□ -2.37
PMS2P54278 SNORD42B-201ENST00000458893 67 ntBASIC0.22□□□□□ -2.37
PMS2P54278 U6.81-201ENST00000612550 106 ntBASIC0.22□□□□□ -2.37
PMS2P54278 MIR6718-201ENST00000616153 80 ntBASIC0.22□□□□□ -2.37
PMS2P54278 RNU6-208P-201ENST00000362431 107 ntBASIC0.21□□□□□ -2.38
PMS2P54278 RNU6-824P-201ENST00000363724 104 ntBASIC0.21□□□□□ -2.38
PMS2P54278 MIR876-201ENST00000401147 81 ntBASIC0.21□□□□□ -2.38
PMS2P54278 AL450471.1-201ENST00000447509 127 ntBASIC0.21□□□□□ -2.38
PMS2P54278 RNA5SP476-201ENST00000516613 103 ntBASIC0.21□□□□□ -2.38
PMS2P54278 MIR4473-201ENST00000583731 91 ntBASIC0.21□□□□□ -2.38
PMS2P54278 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
PMS2P54278 MIR652-201ENST00000385278 98 ntBASIC0.2□□□□□ -2.38
PMS2P54278 RNU6-129P-201ENST00000391022 107 ntBASIC0.2□□□□□ -2.38
PMS2P54278 MIR4743-201ENST00000584576 69 ntBASIC0.2□□□□□ -2.38
PMS2P54278 RNU6-1276P-201ENST00000365372 104 ntBASIC0.19□□□□□ -2.38
PMS2P54278 RNU6-242P-201ENST00000384359 107 ntBASIC0.19□□□□□ -2.38
PMS2P54278 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
PMS2P54278 RNY4P29-201ENST00000410801 97 ntBASIC0.19□□□□□ -2.38
PMS2P54278 SCARNA17.3-201ENST00000516381 125 ntBASIC0.19□□□□□ -2.38
PMS2P54278 MIR4666B-201ENST00000578142 81 ntBASIC0.19□□□□□ -2.38
PMS2P54278 YWHAEP3-201ENST00000582767 121 ntBASIC0.19□□□□□ -2.38
PMS2P54278 MIR4679-1-201ENST00000637619 75 ntBASIC0.19□□□□□ -2.38
PMS2P54278 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
PMS2P54278 RNU6-478P-201ENST00000363904 110 ntBASIC0.18□□□□□ -2.38
PMS2P54278 RNU6-340P-201ENST00000364005 107 ntBASIC0.18□□□□□ -2.38
PMS2P54278 RNU6-686P-201ENST00000364839 107 ntBASIC0.18□□□□□ -2.38
PMS2P54278 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
PMS2P54278 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
PMS2P54278 RNU7-129P-201ENST00000516128 62 ntBASIC0.18□□□□□ -2.38
PMS2P54278 MIRLET7A1-201ENST00000362295 80 ntBASIC0.17□□□□□ -2.38
PMS2P54278 RNU6-382P-201ENST00000365181 106 ntBASIC0.17□□□□□ -2.38
PMS2P54278 RNU6-154P-201ENST00000384306 106 ntBASIC0.17□□□□□ -2.38
PMS2P54278 SNORA26.2-201ENST00000390922 122 ntBASIC0.17□□□□□ -2.38
PMS2P54278 SNORA75.1-201ENST00000391130 148 ntBASIC0.17□□□□□ -2.38
PMS2P54278 RNA5SP299-201ENST00000391203 116 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms