Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNU7-107P-201ENST00000459121 61 ntBASIC-0.94□□□□□ -2.56
SMSP52788 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.94□□□□□ -2.56
SMSP52788 AC021146.6-201ENST00000514659 117 ntBASIC-0.94□□□□□ -2.56
SMSP52788 RNU6-719P-201ENST00000516671 104 ntBASIC-0.94□□□□□ -2.56
SMSP52788 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.95□□□□□ -2.56
SMSP52788 MIR587-201ENST00000384845 96 ntBASIC-0.95□□□□□ -2.56
SMSP52788 snosnR66.1-201ENST00000391095 99 ntBASIC-0.95□□□□□ -2.56
SMSP52788 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
SMSP52788 U6.95-201ENST00000636931 70 ntBASIC-0.95□□□□□ -2.56
SMSP52788 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.96□□□□□ -2.56
SMSP52788 RNU6-132P-201ENST00000383863 107 ntBASIC-0.96□□□□□ -2.56
SMSP52788 RNU6-80P-201ENST00000384195 107 ntBASIC-0.96□□□□□ -2.56
SMSP52788 RNU6-721P-201ENST00000410155 105 ntBASIC-0.96□□□□□ -2.56
SMSP52788 FGF7P7-201ENST00000514120 227 ntBASIC-0.96□□□□□ -2.56
SMSP52788 RNU4-32P-201ENST00000363404 141 ntBASIC-0.97□□□□□ -2.56
SMSP52788 RNU6-881P-201ENST00000516813 102 ntBASIC-0.97□□□□□ -2.56
SMSP52788 MIR8068-201ENST00000618032 68 ntBASIC-0.97□□□□□ -2.56
SMSP52788 RNU6-495P-201ENST00000362995 107 ntBASIC-0.98□□□□□ -2.57
SMSP52788 SNORD114-25-201ENST00000363742 72 ntBASIC-0.98□□□□□ -2.57
SMSP52788 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.98□□□□□ -2.57
SMSP52788 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
SMSP52788 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.98□□□□□ -2.57
SMSP52788 SNORD4B-201ENST00000459083 72 ntBASIC-0.98□□□□□ -2.57
SMSP52788 RNU6-794P-201ENST00000517261 64 ntBASIC-0.98□□□□□ -2.57
SMSP52788 MIR3064-201ENST00000581130 66 ntBASIC-0.98□□□□□ -2.57
SMSP52788 AC103810.7-201ENST00000607821 91 ntBASIC-0.98□□□□□ -2.57
SMSP52788 MIR518B-201ENST00000385127 83 ntBASIC-0.99□□□□□ -2.57
SMSP52788 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
SMSP52788 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.99□□□□□ -2.57
SMSP52788 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.99□□□□□ -2.57
SMSP52788 RNU6-971P-201ENST00000516920 106 ntBASIC-0.99□□□□□ -2.57
SMSP52788 RNU6-255P-201ENST00000516957 105 ntBASIC-0.99□□□□□ -2.57
SMSP52788 MIR3179-1-201ENST00000578940 84 ntBASIC-0.99□□□□□ -2.57
SMSP52788 MIR3179-2-201ENST00000579107 84 ntBASIC-0.99□□□□□ -2.57
SMSP52788 MIR3179-3-201ENST00000579566 84 ntBASIC-0.99□□□□□ -2.57
SMSP52788 AC104996.3-201ENST00000590718 94 ntBASIC-0.99□□□□□ -2.57
SMSP52788 MIR6773-201ENST00000612812 74 ntBASIC-0.99□□□□□ -2.57
SMSP52788 MIR3179-4-201ENST00000617599 84 ntBASIC-0.99□□□□□ -2.57
SMSP52788 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
SMSP52788 SNORD22.1-201ENST00000516331 125 ntBASIC-1□□□□□ -2.57
SMSP52788 MIR3140-201ENST00000583685 90 ntBASIC-1□□□□□ -2.57
SMSP52788 MIR6854-201ENST00000614935 69 ntBASIC-1□□□□□ -2.57
SMSP52788 RNU4-36P-201ENST00000364294 144 ntBASIC-1.01□□□□□ -2.57
SMSP52788 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.01□□□□□ -2.57
SMSP52788 SNORA24B-201ENST00000384176 131 ntBASIC-1.01□□□□□ -2.57
SMSP52788 MIR548A3-201ENST00000385297 97 ntBASIC-1.01□□□□□ -2.57
SMSP52788 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
SMSP52788 RNU6-337P-201ENST00000391243 106 ntBASIC-1.01□□□□□ -2.57
SMSP52788 RNU7-24P-201ENST00000458867 62 ntBASIC-1.01□□□□□ -2.57
SMSP52788 RNU6-659P-201ENST00000516454 104 ntBASIC-1.01□□□□□ -2.57
SMSP52788 RNU6-62P-201ENST00000516526 102 ntBASIC-1.01□□□□□ -2.57
SMSP52788 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.02□□□□□ -2.57
SMSP52788 SNORA63.6-201ENST00000364921 119 ntBASIC-1.02□□□□□ -2.57
SMSP52788 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.02□□□□□ -2.57
SMSP52788 MIR548A1-201ENST00000385041 97 ntBASIC-1.02□□□□□ -2.57
SMSP52788 SNORD33.1-201ENST00000516213 88 ntBASIC-1.02□□□□□ -2.57
SMSP52788 MIR4777-201ENST00000583710 86 ntBASIC-1.02□□□□□ -2.57
SMSP52788 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.57
SMSP52788 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.03□□□□□ -2.57
SMSP52788 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.03□□□□□ -2.57
SMSP52788 MIR517B-201ENST00000385102 67 ntBASIC-1.03□□□□□ -2.57
SMSP52788 MIRLET7B-201ENST00000385140 83 ntBASIC-1.03□□□□□ -2.57
SMSP52788 RNU6-346P-201ENST00000516288 111 ntBASIC-1.03□□□□□ -2.57
SMSP52788 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.04□□□□□ -2.58
SMSP52788 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.04□□□□□ -2.58
SMSP52788 MIR4723-201ENST00000585070 81 ntBASIC-1.04□□□□□ -2.58
SMSP52788 MIR6738-201ENST00000619620 64 ntBASIC-1.04□□□□□ -2.58
SMSP52788 MIR4320-201ENST00000636981 65 ntBASIC-1.04□□□□□ -2.58
SMSP52788 RNU6-990P-201ENST00000364385 104 ntBASIC-1.05□□□□□ -2.58
SMSP52788 RNU6-10P-201ENST00000384036 107 ntBASIC-1.05□□□□□ -2.58
SMSP52788 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.05□□□□□ -2.58
SMSP52788 RNU6-905P-201ENST00000384434 107 ntBASIC-1.05□□□□□ -2.58
SMSP52788 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
SMSP52788 RNU6-519P-201ENST00000410590 108 ntBASIC-1.05□□□□□ -2.58
SMSP52788 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.05□□□□□ -2.58
SMSP52788 MIR548Z-201ENST00000584743 97 ntBASIC-1.05□□□□□ -2.58
SMSP52788 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.06□□□□□ -2.58
SMSP52788 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.06□□□□□ -2.58
SMSP52788 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
SMSP52788 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.06□□□□□ -2.58
SMSP52788 SNORD75.2-201ENST00000408784 58 ntBASIC-1.06□□□□□ -2.58
SMSP52788 AP000533.3-201ENST00000447704 118 ntBASIC-1.06□□□□□ -2.58
SMSP52788 AL500527.2-201ENST00000454105 95 ntBASIC-1.06□□□□□ -2.58
SMSP52788 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.07□□□□□ -2.58
SMSP52788 SNORD74.6-201ENST00000364796 70 ntBASIC-1.07□□□□□ -2.58
SMSP52788 AC022137.1-201ENST00000483735 151 ntBASIC-1.07□□□□□ -2.58
SMSP52788 RNU6-412P-201ENST00000516434 106 ntBASIC-1.07□□□□□ -2.58
SMSP52788 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.08□□□□□ -2.58
SMSP52788 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.08□□□□□ -2.58
SMSP52788 MIR601-201ENST00000385256 79 ntBASIC-1.08□□□□□ -2.58
SMSP52788 SNORD90-201ENST00000391145 111 ntBASIC-1.08□□□□□ -2.58
SMSP52788 snoR1.1-201ENST00000628177 80 ntBASIC-1.08□□□□□ -2.58
SMSP52788 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.09□□□□□ -2.58
SMSP52788 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.09□□□□□ -2.58
SMSP52788 RNU6-972P-201ENST00000391208 107 ntBASIC-1.09□□□□□ -2.58
SMSP52788 AC090425.1-201ENST00000610007 140 ntBASIC-1.09□□□□□ -2.58
SMSP52788 AC012531.4-201ENST00000616509 177 ntBASIC-1.09□□□□□ -2.58
SMSP52788 RNU6-880P-201ENST00000384526 107 ntBASIC-1.1□□□□□ -2.59
SMSP52788 RNA5SP292-201ENST00000390974 118 ntBASIC-1.1□□□□□ -2.59
SMSP52788 MTATP6P29-201ENST00000415057 132 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms