Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 Y_RNA.437-201ENST00000384113 113 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 MIR1197-201ENST00000408818 88 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 RNU6-1052P-201ENST00000411398 104 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 RNU7-24P-201ENST00000458867 62 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 RNU6-719P-201ENST00000516671 104 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 MIR548AE1-201ENST00000583292 70 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 MIR4677-201ENST00000584153 80 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 AC062037.1-201ENST00000605302 128 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 U7.6-201ENST00000610841 64 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 MIR499B-201ENST00000636498 73 ntBASIC0.26□□□□□ -2.37
CLCN3P51790 SNORA9.1-201ENST00000362412 131 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 RNU6-1152P-201ENST00000384576 107 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 MIR548H2-201ENST00000408874 88 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 RNU7-171P-201ENST00000459581 62 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 RNU5B-6P-201ENST00000516765 68 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 RNU6-557P-201ENST00000516842 110 ntBASIC0.25□□□□□ -2.37
CLCN3P51790 RNY1P1-201ENST00000364372 112 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 RNU6-820P-201ENST00000384273 107 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 RNU6-1177P-201ENST00000391058 104 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 Y_RNA.611-201ENST00000410682 108 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 SNORD42B-201ENST00000458893 67 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
CLCN3P51790 RNU6-824P-201ENST00000363724 104 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 SNORD73B-201ENST00000364394 72 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 RNU6-127P-201ENST00000390897 107 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 MIR876-201ENST00000401147 81 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 Y_RNA.606-201ENST00000410579 103 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 Y_RNA.607-201ENST00000410597 98 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.23□□□□□ -2.37
CLCN3P51790 AC097510.1-201ENST00000510945 133 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 MIR3925-201ENST00000584674 77 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 U6.81-201ENST00000612550 106 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 IGLL4P-201ENST00000614590 133 ntBASIC0.23□□□□□ -2.37
CLCN3P51790 MIR494-201ENST00000349529 81 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 RNU5F-1-201ENST00000362507 117 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 SNORD115-37-201ENST00000363768 82 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 Y_RNA.407-201ENST00000383986 113 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 SNORD75.2-201ENST00000408784 58 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 RNU6-592P-201ENST00000411333 103 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 AC022137.1-201ENST00000483735 151 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 RNU7-129P-201ENST00000516128 62 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 RNU6-782P-201ENST00000516852 104 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 AC023932.2-201ENST00000603176 175 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 MIR6718-201ENST00000616153 80 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 AL109933.3-201ENST00000619095 188 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 MIR4679-1-201ENST00000637619 75 ntBASIC0.22□□□□□ -2.37
CLCN3P51790 RNU6-478P-201ENST00000363904 110 ntBASIC0.21□□□□□ -2.38
CLCN3P51790 Y_RNA.426-201ENST00000384068 113 ntBASIC0.21□□□□□ -2.38
CLCN3P51790 MIR4473-201ENST00000583731 91 ntBASIC0.21□□□□□ -2.38
CLCN3P51790 AC006254.2-201ENST00000603259 279 ntBASIC0.21□□□□□ -2.38
CLCN3P51790 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.21□□□□□ -2.38
CLCN3P51790 RNU6-787P-201ENST00000384032 107 ntBASIC0.2□□□□□ -2.38
CLCN3P51790 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
CLCN3P51790 MIR1302-4-201ENST00000408701 150 ntBASIC0.2□□□□□ -2.38
CLCN3P51790 Y_RNA.660-201ENST00000516002 120 ntBASIC0.2□□□□□ -2.38
CLCN3P51790 MIR2909-201ENST00000617113 69 ntBASIC0.2□□□□□ -2.38
CLCN3P51790 MIR643-201ENST00000385267 97 ntBASIC0.19□□□□□ -2.38
CLCN3P51790 MIR652-201ENST00000385278 98 ntBASIC0.19□□□□□ -2.38
CLCN3P51790 SNORD77.2-201ENST00000391045 68 ntBASIC0.19□□□□□ -2.38
CLCN3P51790 RNA5SP63-201ENST00000391225 112 ntBASIC0.19□□□□□ -2.38
CLCN3P51790 AL450471.1-201ENST00000447509 127 ntBASIC0.19□□□□□ -2.38
CLCN3P51790 MIR4666B-201ENST00000578142 81 ntBASIC0.19□□□□□ -2.38
CLCN3P51790 RNU6-208P-201ENST00000362431 107 ntBASIC0.18□□□□□ -2.38
CLCN3P51790 RNU6-382P-201ENST00000365181 106 ntBASIC0.18□□□□□ -2.38
CLCN3P51790 RNY4P29-201ENST00000410801 97 ntBASIC0.18□□□□□ -2.38
CLCN3P51790 SNORA40.17-201ENST00000517256 115 ntBASIC0.18□□□□□ -2.38
CLCN3P51790 uc_338.10-201ENST00000621872 182 ntBASIC0.18□□□□□ -2.38
CLCN3P51790 MIRLET7A1-201ENST00000362295 80 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 RNU6-340P-201ENST00000364005 107 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 Y_RNA.264-201ENST00000364665 102 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 Y_RNA.316-201ENST00000365118 111 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 RNU6-1276P-201ENST00000365372 104 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 Y_RNA.388-201ENST00000383919 113 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 SCARNA17.3-201ENST00000516381 125 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 MIR4743-201ENST00000584576 69 ntBASIC0.17□□□□□ -2.38
CLCN3P51790 RNU6-154P-201ENST00000384306 106 ntBASIC0.16□□□□□ -2.38
CLCN3P51790 RNU6-129P-201ENST00000391022 107 ntBASIC0.16□□□□□ -2.38
CLCN3P51790 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
CLCN3P51790 RNU6-175P-201ENST00000516896 107 ntBASIC0.16□□□□□ -2.38
CLCN3P51790 RNU6-315P-201ENST00000362666 107 ntBASIC0.15□□□□□ -2.39
CLCN3P51790 RNA5SP257-201ENST00000363023 116 ntBASIC0.15□□□□□ -2.39
CLCN3P51790 Y_RNA.532-201ENST00000384590 113 ntBASIC0.15□□□□□ -2.39
CLCN3P51790 MIR516B1-201ENST00000385211 90 ntBASIC0.15□□□□□ -2.39
CLCN3P51790 RNU6-1108P-201ENST00000516308 104 ntBASIC0.15□□□□□ -2.39
CLCN3P51790 YWHAEP3-201ENST00000582767 121 ntBASIC0.15□□□□□ -2.39
CLCN3P51790 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
CLCN3P51790 SNORD114-4-201ENST00000363962 75 ntBASIC0.14□□□□□ -2.39
CLCN3P51790 RNU6-686P-201ENST00000364839 107 ntBASIC0.14□□□□□ -2.39
CLCN3P51790 MIR582-201ENST00000365731 98 ntBASIC0.14□□□□□ -2.39
CLCN3P51790 AC074348.1-201ENST00000426503 132 ntBASIC0.14□□□□□ -2.39
CLCN3P51790 RNU7-188P-201ENST00000517063 64 ntBASIC0.14□□□□□ -2.39
CLCN3P51790 AC104408.1-201ENST00000605241 170 ntBASIC0.14□□□□□ -2.39
CLCN3P51790 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
CLCN3P51790 RN7SL660P-201ENST00000614852 299 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 261.8 ms