Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 MIR760-201ENST00000390220 80 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 MIR1302-4-201ENST00000408701 150 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 AL450471.1-201ENST00000447509 127 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 snoU13.17-201ENST00000458802 104 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 RNU7-171P-201ENST00000459581 62 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 MIR8087-201ENST00000612745 78 ntBASIC0.32□□□□□ -2.36
TIMP3P35625 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.32□□□□□ -2.36
TIMP3P35625 RNU6-1177P-201ENST00000391058 104 ntBASIC0.31□□□□□ -2.36
TIMP3P35625 RNU6-1232P-201ENST00000516299 86 ntBASIC0.31□□□□□ -2.36
TIMP3P35625 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 RNU6-208P-201ENST00000362431 107 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 Y_RNA.258-201ENST00000364613 105 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 RNU6-54P-201ENST00000365563 107 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 RNU6-1152P-201ENST00000384576 107 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 SNORD77.2-201ENST00000391045 68 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 AC097510.1-201ENST00000510945 133 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 MIR4473-201ENST00000583731 91 ntBASIC0.3□□□□□ -2.36
TIMP3P35625 RNU6-161P-201ENST00000363051 106 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 Y_RNA.264-201ENST00000364665 102 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 RNA5SP128-201ENST00000365305 116 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 Y_RNA.388-201ENST00000383919 113 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 Y_RNA.437-201ENST00000384113 113 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TIMP3P35625 RNU6-129P-201ENST00000391022 107 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 HMGN2P22-201ENST00000427588 175 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 AC073261.1-201ENST00000429409 121 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 Y_RNA.660-201ENST00000516002 120 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 RNU7-129P-201ENST00000516128 62 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 RNU6-1108P-201ENST00000516308 104 ntBASIC0.29□□□□□ -2.36
TIMP3P35625 Y_RNA.125-201ENST00000363371 111 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 Y_RNA.374-201ENST00000365606 101 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 Y_RNA.407-201ENST00000383986 113 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 AL109933.3-201ENST00000619095 188 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 uc_338.10-201ENST00000621872 182 ntBASIC0.28□□□□□ -2.36
TIMP3P35625 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 Y_RNA.30-201ENST00000362572 97 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 RNA5SP173-201ENST00000364857 136 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 RNU6-815P-201ENST00000384080 113 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 MIR1197-201ENST00000408818 88 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 RNU6-592P-201ENST00000411333 103 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.27□□□□□ -2.37
TIMP3P35625 RNU6-557P-201ENST00000516842 110 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 MIR499B-201ENST00000636498 73 ntBASIC0.27□□□□□ -2.37
TIMP3P35625 RNU6-495P-201ENST00000362995 107 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 RNU6-824P-201ENST00000363724 104 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 Y_RNA.316-201ENST00000365118 111 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 RNU6-652P-201ENST00000365488 107 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 Y_RNA.371-201ENST00000365591 113 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 RNU6-573P-201ENST00000383938 106 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 MIR501-201ENST00000390204 84 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 MIR4666B-201ENST00000578142 81 ntBASIC0.26□□□□□ -2.37
TIMP3P35625 RNU6-478P-201ENST00000363904 110 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 SNORD114-4-201ENST00000363962 75 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 RNU6-686P-201ENST00000364839 107 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 SNORD75.2-201ENST00000408784 58 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 YWHAEP3-201ENST00000582767 121 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 MIR548AE1-201ENST00000583292 70 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 MIR4677-201ENST00000584153 80 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 MIR548AD-201ENST00000584780 82 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 MIR4773-1-201ENST00000637203 78 ntBASIC0.25□□□□□ -2.37
TIMP3P35625 Y_RNA.12-201ENST00000362393 112 ntBASIC0.24□□□□□ -2.37
TIMP3P35625 RNU6-382P-201ENST00000365181 106 ntBASIC0.24□□□□□ -2.37
TIMP3P35625 RNU7-24P-201ENST00000458867 62 ntBASIC0.24□□□□□ -2.37
TIMP3P35625 SNORD42B-201ENST00000458893 67 ntBASIC0.24□□□□□ -2.37
TIMP3P35625 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
TIMP3P35625 U6.81-201ENST00000612550 106 ntBASIC0.24□□□□□ -2.37
TIMP3P35625 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
TIMP3P35625 RNU6-340P-201ENST00000364005 107 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 RNU6-681P-201ENST00000364012 104 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 RNU6-154P-201ENST00000384306 106 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 MIR516B1-201ENST00000385211 90 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 MIR652-201ENST00000385278 98 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 RNU6-380P-201ENST00000410207 107 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 Y_RNA.606-201ENST00000410579 103 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 SNORA72.7-201ENST00000516349 94 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 MIR4514-201ENST00000581410 57 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 AC084368.1-201ENST00000620935 65 ntBASIC0.23□□□□□ -2.37
TIMP3P35625 MIRLET7A1-201ENST00000362295 80 ntBASIC0.22□□□□□ -2.37
TIMP3P35625 RNU6-315P-201ENST00000362666 107 ntBASIC0.22□□□□□ -2.37
TIMP3P35625 RNU6-127P-201ENST00000390897 107 ntBASIC0.22□□□□□ -2.37
TIMP3P35625 RNU6-274P-201ENST00000459566 107 ntBASIC0.22□□□□□ -2.37
TIMP3P35625 MIR3202-2-201ENST00000635980 79 ntBASIC0.22□□□□□ -2.37
TIMP3P35625 MIR1245B-201ENST00000636115 69 ntBASIC0.22□□□□□ -2.37
TIMP3P35625 RNA5SP257-201ENST00000363023 116 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 Y_RNA.219-201ENST00000364232 113 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 Y_RNA.313-201ENST00000365095 103 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 RNU6-787P-201ENST00000384032 107 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 SCARNA17.3-201ENST00000516381 125 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
TIMP3P35625 AL691482.2-201ENST00000457453 84 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms