Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNA5SP395-201ENST00000516567 118 ntBASIC0.47□□□□□ -2.33
SLC6A4P31645 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.47□□□□□ -2.33
SLC6A4P31645 AC062037.1-201ENST00000605302 128 ntBASIC0.47□□□□□ -2.33
SLC6A4P31645 MIR4679-1-201ENST00000637619 75 ntBASIC0.47□□□□□ -2.33
SLC6A4P31645 Y_RNA.423-201ENST00000384057 113 ntBASIC0.46□□□□□ -2.34
SLC6A4P31645 RNU6-1152P-201ENST00000384576 107 ntBASIC0.46□□□□□ -2.34
SLC6A4P31645 RNU6-557P-201ENST00000516842 110 ntBASIC0.46□□□□□ -2.34
SLC6A4P31645 MIR4752-201ENST00000579672 72 ntBASIC0.46□□□□□ -2.34
SLC6A4P31645 MIR3140-201ENST00000583685 90 ntBASIC0.46□□□□□ -2.34
SLC6A4P31645 SNORA24B-201ENST00000384176 131 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 SNORD77.2-201ENST00000391045 68 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 RNU6-1177P-201ENST00000391058 104 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 RNY4P29-201ENST00000410801 97 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 RNU6-1052P-201ENST00000411398 104 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 AL450471.1-201ENST00000447509 127 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 RNU6-719P-201ENST00000516671 104 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 RNU1-29P-201ENST00000606574 126 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 SNORA70.25-201ENST00000612741 95 ntBASIC0.45□□□□□ -2.34
SLC6A4P31645 RNU6-1276P-201ENST00000365372 104 ntBASIC0.44□□□□□ -2.34
SLC6A4P31645 AC097510.1-201ENST00000510945 133 ntBASIC0.44□□□□□ -2.34
SLC6A4P31645 YWHAEP2-201ENST00000580066 112 ntBASIC0.44□□□□□ -2.34
SLC6A4P31645 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
SLC6A4P31645 RNU6-208P-201ENST00000362431 107 ntBASIC0.43□□□□□ -2.34
SLC6A4P31645 RNU6V-201ENST00000384105 107 ntBASIC0.43□□□□□ -2.34
SLC6A4P31645 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SLC6A4P31645 RNU6-129P-201ENST00000391022 107 ntBASIC0.43□□□□□ -2.34
SLC6A4P31645 MIR6755-201ENST00000619993 66 ntBASIC0.43□□□□□ -2.34
SLC6A4P31645 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SLC6A4P31645 SNORD114-4-201ENST00000363962 75 ntBASIC0.42□□□□□ -2.34
SLC6A4P31645 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
SLC6A4P31645 SNORD90-201ENST00000391145 111 ntBASIC0.42□□□□□ -2.34
SLC6A4P31645 RNU6-592P-201ENST00000411333 103 ntBASIC0.42□□□□□ -2.34
SLC6A4P31645 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.42□□□□□ -2.34
SLC6A4P31645 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
SLC6A4P31645 RNU6-1327P-201ENST00000365302 105 ntBASIC0.41□□□□□ -2.34
SLC6A4P31645 RNA5SP128-201ENST00000365305 116 ntBASIC0.41□□□□□ -2.34
SLC6A4P31645 RNU6-380P-201ENST00000410207 107 ntBASIC0.41□□□□□ -2.34
SLC6A4P31645 RNU7-24P-201ENST00000458867 62 ntBASIC0.41□□□□□ -2.34
SLC6A4P31645 SNORA72.7-201ENST00000516349 94 ntBASIC0.41□□□□□ -2.34
SLC6A4P31645 SNORA9.1-201ENST00000362412 131 ntBASIC0.4□□□□□ -2.35
SLC6A4P31645 Y_RNA.407-201ENST00000383986 113 ntBASIC0.4□□□□□ -2.35
SLC6A4P31645 Y_RNA.437-201ENST00000384113 113 ntBASIC0.4□□□□□ -2.35
SLC6A4P31645 RNA5SP63-201ENST00000391225 112 ntBASIC0.4□□□□□ -2.35
SLC6A4P31645 AC023932.2-201ENST00000603176 175 ntBASIC0.4□□□□□ -2.35
SLC6A4P31645 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
SLC6A4P31645 RNU6-681P-201ENST00000364012 104 ntBASIC0.39□□□□□ -2.35
SLC6A4P31645 MIR4666B-201ENST00000578142 81 ntBASIC0.39□□□□□ -2.35
SLC6A4P31645 MIR4514-201ENST00000581410 57 ntBASIC0.39□□□□□ -2.35
SLC6A4P31645 MIR2909-201ENST00000617113 69 ntBASIC0.39□□□□□ -2.35
SLC6A4P31645 uc_338.10-201ENST00000621872 182 ntBASIC0.39□□□□□ -2.35
SLC6A4P31645 RNU6-315P-201ENST00000362666 107 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 RNU6-495P-201ENST00000362995 107 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 RNU6-686P-201ENST00000364839 107 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 SNORD75.2-201ENST00000408784 58 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 Y_RNA.606-201ENST00000410579 103 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 snoU13.17-201ENST00000458802 104 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 RNU5B-6P-201ENST00000516765 68 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 MIR3202-2-201ENST00000635980 79 ntBASIC0.38□□□□□ -2.35
SLC6A4P31645 RNU6-161P-201ENST00000363051 106 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 RNU6-54P-201ENST00000365563 107 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 HMGN2P22-201ENST00000427588 175 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 AC073261.1-201ENST00000429409 121 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 RNU6-1108P-201ENST00000516308 104 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 MIR548AD-201ENST00000584780 82 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 U6.81-201ENST00000612550 106 ntBASIC0.37□□□□□ -2.35
SLC6A4P31645 Y_RNA.316-201ENST00000365118 111 ntBASIC0.36□□□□□ -2.35
SLC6A4P31645 Y_RNA.388-201ENST00000383919 113 ntBASIC0.36□□□□□ -2.35
SLC6A4P31645 YWHAEP3-201ENST00000582767 121 ntBASIC0.36□□□□□ -2.35
SLC6A4P31645 MIR4473-201ENST00000583731 91 ntBASIC0.36□□□□□ -2.35
SLC6A4P31645 Y_RNA.219-201ENST00000364232 113 ntBASIC0.35□□□□□ -2.35
SLC6A4P31645 MIRLET7A1-201ENST00000362295 80 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 RNA5SP173-201ENST00000364857 136 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 MIR501-201ENST00000390204 84 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 RNU6-274P-201ENST00000459566 107 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 RNU6-752P-201ENST00000516376 102 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 MIR4677-201ENST00000584153 80 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 MIR1245B-201ENST00000636115 69 ntBASIC0.34□□□□□ -2.36
SLC6A4P31645 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
SLC6A4P31645 Y_RNA.12-201ENST00000362393 112 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 RNU6-824P-201ENST00000363724 104 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 RNU6-340P-201ENST00000364005 107 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 RNU6-652P-201ENST00000365488 107 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 RNA5SP285-201ENST00000516619 119 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 MIR1297-201ENST00000637311 77 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
SLC6A4P31645 RNU6-478P-201ENST00000363904 110 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 RNU6-382P-201ENST00000365181 106 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 RNU6-35P-201ENST00000384530 107 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 RNU6-1232P-201ENST00000516299 86 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 RNU6-303P-201ENST00000517091 106 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 MIR4773-1-201ENST00000637203 78 ntBASIC0.32□□□□□ -2.36
SLC6A4P31645 RNU6-1094P-201ENST00000362416 104 ntBASIC0.31□□□□□ -2.36
SLC6A4P31645 Y_RNA.371-201ENST00000365591 113 ntBASIC0.31□□□□□ -2.36
SLC6A4P31645 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
SLC6A4P31645 SCARNA17.3-201ENST00000516381 125 ntBASIC0.31□□□□□ -2.36
SLC6A4P31645 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms