Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNU6-1124P-201ENST00000384169 107 ntBASIC0.5□□□□□ -2.33
HOXA11P31270 RNU6-1177P-201ENST00000391058 104 ntBASIC0.5□□□□□ -2.33
HOXA11P31270 MIR4752-201ENST00000579672 72 ntBASIC0.5□□□□□ -2.33
HOXA11P31270 RNU6-495P-201ENST00000362995 107 ntBASIC0.49□□□□□ -2.33
HOXA11P31270 MIR7-2-201ENST00000384970 110 ntBASIC0.49□□□□□ -2.33
HOXA11P31270 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
HOXA11P31270 RNA5SP484-201ENST00000458857 111 ntBASIC0.49□□□□□ -2.33
HOXA11P31270 AC074348.1-201ENST00000426503 132 ntBASIC0.48□□□□□ -2.33
HOXA11P31270 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.48□□□□□ -2.33
HOXA11P31270 YWHAEP2-201ENST00000580066 112 ntBASIC0.48□□□□□ -2.33
HOXA11P31270 YWHAEP3-201ENST00000582767 121 ntBASIC0.48□□□□□ -2.33
HOXA11P31270 MIR6779-201ENST00000617283 64 ntBASIC0.48□□□□□ -2.33
HOXA11P31270 RNU6-161P-201ENST00000363051 106 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 SNORD114-23-201ENST00000363536 72 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 RNU6-824P-201ENST00000363724 104 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 Y_RNA.258-201ENST00000364613 105 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 SNORD75.2-201ENST00000408784 58 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 AC069271.1-201ENST00000445577 156 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 RNU6-1108P-201ENST00000516308 104 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.47□□□□□ -2.33
HOXA11P31270 MIR4460-201ENST00000577862 86 ntBASIC0.47□□□□□ -2.33
HOXA11P31270 RNU6-340P-201ENST00000364005 107 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 MIR1255A-201ENST00000408338 113 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 RNU6-1052P-201ENST00000411398 104 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 RNU6-719P-201ENST00000516671 104 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 RNU6-303P-201ENST00000517091 106 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 MIR1297-201ENST00000637311 77 ntBASIC0.46□□□□□ -2.34
HOXA11P31270 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 Y_RNA.532-201ENST00000384590 113 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 NAMPTP3-201ENST00000569273 224 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 SNORA70.25-201ENST00000612741 95 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 MIR6755-201ENST00000619993 66 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
HOXA11P31270 MIR103A1-201ENST00000362165 78 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 Y_RNA.12-201ENST00000362393 112 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 RNU6-1094P-201ENST00000362416 104 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 Y_RNA.205-201ENST00000364128 113 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 RNU6V-201ENST00000384105 107 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 SNORD110-201ENST00000408189 75 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
HOXA11P31270 RNU6-857P-201ENST00000515893 110 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 RNU6-1232P-201ENST00000516299 86 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
HOXA11P31270 RNU6-681P-201ENST00000364012 104 ntBASIC0.43□□□□□ -2.34
HOXA11P31270 RNU6-54P-201ENST00000365563 107 ntBASIC0.43□□□□□ -2.34
HOXA11P31270 RNU6-24P-201ENST00000384440 107 ntBASIC0.43□□□□□ -2.34
HOXA11P31270 RNU6-380P-201ENST00000410207 107 ntBASIC0.43□□□□□ -2.34
HOXA11P31270 AC006210.1-201ENST00000424882 111 ntBASIC0.43□□□□□ -2.34
HOXA11P31270 HMGN2P22-201ENST00000427588 175 ntBASIC0.43□□□□□ -2.34
HOXA11P31270 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
HOXA11P31270 Y_RNA.125-201ENST00000363371 111 ntBASIC0.42□□□□□ -2.34
HOXA11P31270 RNU6-382P-201ENST00000365181 106 ntBASIC0.42□□□□□ -2.34
HOXA11P31270 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
HOXA11P31270 SNORA2A-201ENST00000383885 135 ntBASIC0.42□□□□□ -2.34
HOXA11P31270 SNORD42B-201ENST00000458893 67 ntBASIC0.42□□□□□ -2.34
HOXA11P31270 RNU6-752P-201ENST00000516376 102 ntBASIC0.42□□□□□ -2.34
HOXA11P31270 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
HOXA11P31270 MIR193B-201ENST00000384907 83 ntBASIC0.41□□□□□ -2.34
HOXA11P31270 U7.6-201ENST00000610841 64 ntBASIC0.41□□□□□ -2.34
HOXA11P31270 Y_RNA.423-201ENST00000384057 113 ntBASIC0.4□□□□□ -2.35
HOXA11P31270 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HOXA11P31270 SNORD114-4-201ENST00000363962 75 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 Y_RNA.407-201ENST00000383986 113 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 RNA5SP225-201ENST00000410874 135 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 RNU6-638P-201ENST00000516582 104 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 RNU6-807P-201ENST00000516805 107 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 MIR1273G-201ENST00000577677 100 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 MIR548AD-201ENST00000584780 82 ntBASIC0.39□□□□□ -2.35
HOXA11P31270 RNU6-154P-201ENST00000384306 106 ntBASIC0.38□□□□□ -2.35
HOXA11P31270 MIR501-201ENST00000390204 84 ntBASIC0.38□□□□□ -2.35
HOXA11P31270 RNU5B-6P-201ENST00000516765 68 ntBASIC0.38□□□□□ -2.35
HOXA11P31270 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
HOXA11P31270 Y_RNA.371-201ENST00000365591 113 ntBASIC0.37□□□□□ -2.35
HOXA11P31270 RNU6-1039P-201ENST00000383931 107 ntBASIC0.37□□□□□ -2.35
HOXA11P31270 RNU6-274P-201ENST00000459566 107 ntBASIC0.37□□□□□ -2.35
HOXA11P31270 MIR548AE1-201ENST00000583292 70 ntBASIC0.37□□□□□ -2.35
HOXA11P31270 RNA5SP128-201ENST00000365305 116 ntBASIC0.36□□□□□ -2.35
HOXA11P31270 SCARNA18B-201ENST00000458806 135 ntBASIC0.36□□□□□ -2.35
HOXA11P31270 MIR4677-201ENST00000584153 80 ntBASIC0.36□□□□□ -2.35
HOXA11P31270 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.36□□□□□ -2.35
HOXA11P31270 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 SCARNA17.3-201ENST00000516381 125 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 SNORA40.17-201ENST00000517256 115 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 AC145423.2-201ENST00000610631 239 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 uc_338.10-201ENST00000621872 182 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 MIR4773-1-201ENST00000637203 78 ntBASIC0.35□□□□□ -2.35
HOXA11P31270 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
HOXA11P31270 MIR760-201ENST00000390220 80 ntBASIC0.34□□□□□ -2.36
HOXA11P31270 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
HOXA11P31270 U7.4-201ENST00000614961 63 ntBASIC0.34□□□□□ -2.36
HOXA11P31270 MIR652-201ENST00000385278 98 ntBASIC0.33□□□□□ -2.36
HOXA11P31270 MIR876-201ENST00000401147 81 ntBASIC0.33□□□□□ -2.36
HOXA11P31270 MIR4473-201ENST00000583731 91 ntBASIC0.33□□□□□ -2.36
HOXA11P31270 MIR499B-201ENST00000636498 73 ntBASIC0.33□□□□□ -2.36
HOXA11P31270 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 679.4 ms