Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.16□□□□□ -2.22
RFX1P22670 AL162376.1-201ENST00000624117 175 ntBASIC1.16□□□□□ -2.22
RFX1P22670 RNY1P8-201ENST00000383970 114 ntBASIC1.15□□□□□ -2.23
RFX1P22670 MIR140-201ENST00000385282 100 ntBASIC1.15□□□□□ -2.23
RFX1P22670 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RFX1P22670 RNU6-274P-201ENST00000459566 107 ntBASIC1.15□□□□□ -2.23
RFX1P22670 MIR548O2-201ENST00000616090 70 ntBASIC1.15□□□□□ -2.23
RFX1P22670 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
RFX1P22670 SNORD45.1-201ENST00000363181 77 ntBASIC1.13□□□□□ -2.23
RFX1P22670 SNORD45A-201ENST00000384512 84 ntBASIC1.13□□□□□ -2.23
RFX1P22670 MIR7107-201ENST00000611489 80 ntBASIC1.13□□□□□ -2.23
RFX1P22670 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
RFX1P22670 RNU1-141P-201ENST00000364623 158 ntBASIC1.12□□□□□ -2.23
RFX1P22670 Y_RNA.374-201ENST00000365606 101 ntBASIC1.12□□□□□ -2.23
RFX1P22670 Y_RNA.386-201ENST00000383913 105 ntBASIC1.12□□□□□ -2.23
RFX1P22670 RNU6-663P-201ENST00000391105 106 ntBASIC1.12□□□□□ -2.23
RFX1P22670 SNORD75.2-201ENST00000408784 58 ntBASIC1.12□□□□□ -2.23
RFX1P22670 RNA5SP436-201ENST00000516020 115 ntBASIC1.12□□□□□ -2.23
RFX1P22670 RNU6-752P-201ENST00000516376 102 ntBASIC1.12□□□□□ -2.23
RFX1P22670 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
RFX1P22670 RNU6-495P-201ENST00000362995 107 ntBASIC1.11□□□□□ -2.23
RFX1P22670 SNORD115-22-201ENST00000364456 82 ntBASIC1.11□□□□□ -2.23
RFX1P22670 RNA5SP517-201ENST00000364724 117 ntBASIC1.11□□□□□ -2.23
RFX1P22670 NAMPTP3-201ENST00000569273 224 ntBASIC1.11□□□□□ -2.23
RFX1P22670 U6.111-201ENST00000636093 83 ntBASIC1.11□□□□□ -2.23
RFX1P22670 RNU6-604P-201ENST00000390917 100 ntBASIC1.1□□□□□ -2.23
RFX1P22670 AL691482.2-201ENST00000457453 84 ntBASIC1.1□□□□□ -2.23
RFX1P22670 RNU7-24P-201ENST00000458867 62 ntBASIC1.1□□□□□ -2.23
RFX1P22670 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
RFX1P22670 MIR8053-201ENST00000613344 75 ntBASIC1.1□□□□□ -2.23
RFX1P22670 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RFX1P22670 Y_RNA.340-201ENST00000365330 92 ntBASIC1.09□□□□□ -2.23
RFX1P22670 RNU6-54P-201ENST00000365563 107 ntBASIC1.09□□□□□ -2.23
RFX1P22670 RNU6-895P-201ENST00000384125 103 ntBASIC1.09□□□□□ -2.23
RFX1P22670 RNU6-800P-201ENST00000384473 103 ntBASIC1.09□□□□□ -2.23
RFX1P22670 MT-TY-201ENST00000387409 66 ntBASIC1.09□□□□□ -2.23
RFX1P22670 AC125388.1-201ENST00000459631 156 ntBASIC1.09□□□□□ -2.23
RFX1P22670 PSMC1P5-201ENST00000512850 177 ntBASIC1.09□□□□□ -2.23
RFX1P22670 RNU6-881P-201ENST00000516813 102 ntBASIC1.09□□□□□ -2.23
RFX1P22670 MIR4460-201ENST00000577862 86 ntBASIC1.09□□□□□ -2.23
RFX1P22670 MIR4653-201ENST00000585107 83 ntBASIC1.09□□□□□ -2.23
RFX1P22670 AC073869.9-201ENST00000641610 120 ntBASIC1.09□□□□□ -2.23
RFX1P22670 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
RFX1P22670 MIR1265-201ENST00000408444 86 ntBASIC1.08□□□□□ -2.24
RFX1P22670 AL590095.2-201ENST00000604136 117 ntBASIC1.08□□□□□ -2.24
RFX1P22670 AC092634.7-201ENST00000621022 103 ntBASIC1.08□□□□□ -2.24
RFX1P22670 RNU6V-201ENST00000384105 107 ntBASIC1.07□□□□□ -2.24
RFX1P22670 RNA5SP484-201ENST00000458857 111 ntBASIC1.07□□□□□ -2.24
RFX1P22670 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.07□□□□□ -2.24
RFX1P22670 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
RFX1P22670 SNORD113.1-201ENST00000363280 73 ntBASIC1.06□□□□□ -2.24
RFX1P22670 RNU6-1039P-201ENST00000383931 107 ntBASIC1.06□□□□□ -2.24
RFX1P22670 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
RFX1P22670 MIR6509-201ENST00000614603 85 ntBASIC1.06□□□□□ -2.24
RFX1P22670 MIR203A-201ENST00000384836 110 ntBASIC1.05□□□□□ -2.24
RFX1P22670 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
RFX1P22670 SNORA40.8-201ENST00000411034 126 ntBASIC1.05□□□□□ -2.24
RFX1P22670 SNORD42B-201ENST00000458893 67 ntBASIC1.05□□□□□ -2.24
RFX1P22670 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
RFX1P22670 MIR6857-201ENST00000613267 93 ntBASIC1.05□□□□□ -2.24
RFX1P22670 SNORD118-201ENST00000363593 134 ntBASIC1.04□□□□□ -2.24
RFX1P22670 RNU6-630P-201ENST00000391258 106 ntBASIC1.04□□□□□ -2.24
RFX1P22670 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.04□□□□□ -2.24
RFX1P22670 AC005520.4-201ENST00000604337 90 ntBASIC1.04□□□□□ -2.24
RFX1P22670 RNU6-1216P-201ENST00000362590 107 ntBASIC1.03□□□□□ -2.24
RFX1P22670 SNORD116-24-201ENST00000384549 92 ntBASIC1.03□□□□□ -2.24
RFX1P22670 AC069503.3-201ENST00000618674 145 ntBASIC1.03□□□□□ -2.24
RFX1P22670 Y_RNA.30-201ENST00000362572 97 ntBASIC1.01□□□□□ -2.25
RFX1P22670 Y_RNA.443-201ENST00000384135 111 ntBASIC1.01□□□□□ -2.25
RFX1P22670 RNU6-982P-201ENST00000516216 102 ntBASIC1.01□□□□□ -2.25
RFX1P22670 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
RFX1P22670 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
RFX1P22670 RNU6-471P-201ENST00000383944 106 ntBASIC1□□□□□ -2.25
RFX1P22670 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
RFX1P22670 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
RFX1P22670 AC069271.1-201ENST00000445577 156 ntBASIC1□□□□□ -2.25
RFX1P22670 MIR5706-201ENST00000579841 80 ntBASIC1□□□□□ -2.25
RFX1P22670 MIR3657-201ENST00000584818 117 ntBASIC1□□□□□ -2.25
RFX1P22670 SNORA25.4-201ENST00000363666 124 ntBASIC0.99□□□□□ -2.25
RFX1P22670 RNU6-260P-201ENST00000384092 107 ntBASIC0.99□□□□□ -2.25
RFX1P22670 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
RFX1P22670 RNU6-848P-201ENST00000515948 107 ntBASIC0.99□□□□□ -2.25
RFX1P22670 RNU6-617P-201ENST00000516147 107 ntBASIC0.99□□□□□ -2.25
RFX1P22670 RNU6-473P-201ENST00000516164 107 ntBASIC0.99□□□□□ -2.25
RFX1P22670 RNU6-1049P-201ENST00000516414 107 ntBASIC0.99□□□□□ -2.25
RFX1P22670 RNU5B-6P-201ENST00000516765 68 ntBASIC0.99□□□□□ -2.25
RFX1P22670 MIR1273G-201ENST00000577677 100 ntBASIC0.99□□□□□ -2.25
RFX1P22670 SNORD110-201ENST00000408189 75 ntBASIC0.98□□□□□ -2.25
RFX1P22670 SNORD71-201ENST00000411292 86 ntBASIC0.98□□□□□ -2.25
RFX1P22670 MIR4752-201ENST00000579672 72 ntBASIC0.98□□□□□ -2.25
RFX1P22670 RNU6-990P-201ENST00000364385 104 ntBASIC0.97□□□□□ -2.25
RFX1P22670 AC006210.1-201ENST00000424882 111 ntBASIC0.97□□□□□ -2.25
RFX1P22670 SNORA40.17-201ENST00000517256 115 ntBASIC0.97□□□□□ -2.25
RFX1P22670 AC018659.1-201ENST00000551083 169 ntBASIC0.97□□□□□ -2.25
RFX1P22670 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
RFX1P22670 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
RFX1P22670 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
RFX1P22670 AL109933.3-201ENST00000619095 188 ntBASIC0.96□□□□□ -2.26
RFX1P22670 AC098934.3-201ENST00000430450 190 ntBASIC0.95□□□□□ -2.26
RFX1P22670 RNU1-29P-201ENST00000606574 126 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms