Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 RNU6-1187P-201ENST00000364771 110 ntBASIC1.17□□□□□ -2.22
EPHA1P21709 RNA5SP94-201ENST00000516917 108 ntBASIC1.17□□□□□ -2.22
EPHA1P21709 SNORA40.17-201ENST00000517256 115 ntBASIC1.17□□□□□ -2.22
EPHA1P21709 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.17□□□□□ -2.22
EPHA1P21709 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
EPHA1P21709 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
EPHA1P21709 snoU13.18-201ENST00000459483 104 ntBASIC1.16□□□□□ -2.22
EPHA1P21709 AL109933.3-201ENST00000619095 188 ntBASIC1.16□□□□□ -2.22
EPHA1P21709 MIR6739-201ENST00000622461 75 ntBASIC1.16□□□□□ -2.22
EPHA1P21709 MIR9-2-201ENST00000384838 87 ntBASIC1.15□□□□□ -2.23
EPHA1P21709 AC018659.1-201ENST00000551083 169 ntBASIC1.15□□□□□ -2.23
EPHA1P21709 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
EPHA1P21709 Y_RNA.375-201ENST00000365625 101 ntBASIC1.14□□□□□ -2.23
EPHA1P21709 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.14□□□□□ -2.23
EPHA1P21709 RNA5SP147-201ENST00000516493 109 ntBASIC1.14□□□□□ -2.23
EPHA1P21709 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
EPHA1P21709 AL353765.1-201ENST00000605514 183 ntBASIC1.14□□□□□ -2.23
EPHA1P21709 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.14□□□□□ -2.23
EPHA1P21709 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
EPHA1P21709 RNU6-669P-201ENST00000365575 107 ntBASIC1.13□□□□□ -2.23
EPHA1P21709 AC006210.1-201ENST00000424882 111 ntBASIC1.13□□□□□ -2.23
EPHA1P21709 RNU6-542P-201ENST00000516405 103 ntBASIC1.13□□□□□ -2.23
EPHA1P21709 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
EPHA1P21709 MIR7107-201ENST00000611489 80 ntBASIC1.13□□□□□ -2.23
EPHA1P21709 Y_RNA.407-201ENST00000383986 113 ntBASIC1.12□□□□□ -2.23
EPHA1P21709 RNA5SP222-201ENST00000411039 105 ntBASIC1.12□□□□□ -2.23
EPHA1P21709 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
EPHA1P21709 RNU6-656P-201ENST00000516785 107 ntBASIC1.12□□□□□ -2.23
EPHA1P21709 AC110620.1-201ENST00000416042 228 ntBASIC1.11□□□□□ -2.23
EPHA1P21709 MIR4452-201ENST00000583004 71 ntBASIC1.11□□□□□ -2.23
EPHA1P21709 MIR489-201ENST00000384923 84 ntBASIC1.1□□□□□ -2.23
EPHA1P21709 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
EPHA1P21709 SNORD110-201ENST00000408189 75 ntBASIC1.1□□□□□ -2.23
EPHA1P21709 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
EPHA1P21709 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
EPHA1P21709 RNA5SP215-201ENST00000363440 122 ntBASIC1.09□□□□□ -2.23
EPHA1P21709 RNU6-1162P-201ENST00000384443 104 ntBASIC1.09□□□□□ -2.23
EPHA1P21709 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
EPHA1P21709 SCARNA17.3-201ENST00000516381 125 ntBASIC1.09□□□□□ -2.23
EPHA1P21709 RNU6-42P-201ENST00000384165 107 ntBASIC1.07□□□□□ -2.24
EPHA1P21709 MIR521-2-201ENST00000384818 87 ntBASIC1.07□□□□□ -2.24
EPHA1P21709 AC021146.9-201ENST00000512503 156 ntBASIC1.07□□□□□ -2.24
EPHA1P21709 RNA5SP220-201ENST00000516298 104 ntBASIC1.07□□□□□ -2.24
EPHA1P21709 MIR6734-201ENST00000621166 68 ntBASIC1.07□□□□□ -2.24
EPHA1P21709 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
EPHA1P21709 MIR652-201ENST00000385278 98 ntBASIC1.06□□□□□ -2.24
EPHA1P21709 RNU6-1089P-201ENST00000516473 104 ntBASIC1.06□□□□□ -2.24
EPHA1P21709 MIR4473-201ENST00000583731 91 ntBASIC1.06□□□□□ -2.24
EPHA1P21709 SNORA63.6-201ENST00000364921 119 ntBASIC1.05□□□□□ -2.24
EPHA1P21709 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
EPHA1P21709 MIR548AE1-201ENST00000583292 70 ntBASIC1.05□□□□□ -2.24
EPHA1P21709 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
EPHA1P21709 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
EPHA1P21709 SNORA15B-2-201ENST00000384058 135 ntBASIC1.04□□□□□ -2.24
EPHA1P21709 SNORA15B-1-201ENST00000384334 135 ntBASIC1.04□□□□□ -2.24
EPHA1P21709 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
EPHA1P21709 SNORA70.25-201ENST00000612741 95 ntBASIC1.04□□□□□ -2.24
EPHA1P21709 AC092634.7-201ENST00000621022 103 ntBASIC1.04□□□□□ -2.24
EPHA1P21709 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.04□□□□□ -2.24
EPHA1P21709 RNU6-499P-201ENST00000365615 107 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 MIR140-201ENST00000385282 100 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 RNA5SP299-201ENST00000391203 116 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 AL157398.1-201ENST00000452981 186 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 snoU13.13-201ENST00000458842 104 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 SCARNA21.1-201ENST00000515996 128 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 MIR5706-201ENST00000579841 80 ntBASIC1.03□□□□□ -2.24
EPHA1P21709 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
EPHA1P21709 RNU6-302P-201ENST00000365249 107 ntBASIC1.02□□□□□ -2.25
EPHA1P21709 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
EPHA1P21709 Y_RNA.633-201ENST00000459107 95 ntBASIC1.02□□□□□ -2.25
EPHA1P21709 uc_338.10-201ENST00000621872 182 ntBASIC1.02□□□□□ -2.25
EPHA1P21709 RNA5SP517-201ENST00000364724 117 ntBASIC1.01□□□□□ -2.25
EPHA1P21709 RNY1P8-201ENST00000383970 114 ntBASIC1.01□□□□□ -2.25
EPHA1P21709 MIR4752-201ENST00000579672 72 ntBASIC1.01□□□□□ -2.25
EPHA1P21709 MIR96-201ENST00000362288 78 ntBASIC1□□□□□ -2.25
EPHA1P21709 SNORA25.5-201ENST00000363782 126 ntBASIC1□□□□□ -2.25
EPHA1P21709 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
EPHA1P21709 MIR548E-201ENST00000408287 88 ntBASIC1□□□□□ -2.25
EPHA1P21709 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
EPHA1P21709 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
EPHA1P21709 MIR582-201ENST00000365731 98 ntBASIC0.99□□□□□ -2.25
EPHA1P21709 RNU1-29P-201ENST00000606574 126 ntBASIC0.99□□□□□ -2.25
EPHA1P21709 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
EPHA1P21709 HMGN2P22-201ENST00000427588 175 ntBASIC0.98□□□□□ -2.25
EPHA1P21709 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
EPHA1P21709 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
EPHA1P21709 ACA64.5-201ENST00000516207 127 ntBASIC0.97□□□□□ -2.25
EPHA1P21709 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
EPHA1P21709 RNU6-940P-201ENST00000363433 104 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 SNORD118-201ENST00000363593 134 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 RNU1-93P-201ENST00000364704 169 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 SNORA33.1-201ENST00000364957 130 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 MIR548C-201ENST00000384815 97 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 MTND4LP19-201ENST00000403051 166 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 SNORA40.8-201ENST00000411034 126 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 AC069271.1-201ENST00000445577 156 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
EPHA1P21709 U7.6-201ENST00000610841 64 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms