Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AL162376.1-201ENST00000624117 175 ntBASIC0.89□□□□□ -2.27
KRT4P19013 Y_RNA.338-201ENST00000365320 114 ntBASIC0.88□□□□□ -2.27
KRT4P19013 RNU6-669P-201ENST00000365575 107 ntBASIC0.88□□□□□ -2.27
KRT4P19013 MIR9-2-201ENST00000384838 87 ntBASIC0.88□□□□□ -2.27
KRT4P19013 RNU6-1053P-201ENST00000515930 101 ntBASIC0.88□□□□□ -2.27
KRT4P19013 RNU6-542P-201ENST00000516405 103 ntBASIC0.88□□□□□ -2.27
KRT4P19013 MIR18A-201ENST00000362310 71 ntBASIC0.87□□□□□ -2.27
KRT4P19013 Y_RNA.375-201ENST00000365625 101 ntBASIC0.87□□□□□ -2.27
KRT4P19013 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
KRT4P19013 AC110620.1-201ENST00000416042 228 ntBASIC0.87□□□□□ -2.27
KRT4P19013 RNA5SP484-201ENST00000458857 111 ntBASIC0.87□□□□□ -2.27
KRT4P19013 RNA5SP227-201ENST00000516184 113 ntBASIC0.87□□□□□ -2.27
KRT4P19013 MIR6739-201ENST00000622461 75 ntBASIC0.87□□□□□ -2.27
KRT4P19013 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
KRT4P19013 RNU5B-6P-201ENST00000516765 68 ntBASIC0.86□□□□□ -2.27
KRT4P19013 AC018659.1-201ENST00000551083 169 ntBASIC0.86□□□□□ -2.27
KRT4P19013 AC011195.1-201ENST00000578177 177 ntBASIC0.86□□□□□ -2.27
KRT4P19013 AL109933.3-201ENST00000619095 188 ntBASIC0.86□□□□□ -2.27
KRT4P19013 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRT4P19013 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
KRT4P19013 RNU6-990P-201ENST00000364385 104 ntBASIC0.85□□□□□ -2.27
KRT4P19013 RNA5SP268-201ENST00000516828 124 ntBASIC0.85□□□□□ -2.27
KRT4P19013 RNA5SP215-201ENST00000363440 122 ntBASIC0.84□□□□□ -2.27
KRT4P19013 RNU6-392P-201ENST00000364926 101 ntBASIC0.84□□□□□ -2.27
KRT4P19013 RNU6-499P-201ENST00000365615 107 ntBASIC0.84□□□□□ -2.27
KRT4P19013 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
KRT4P19013 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
KRT4P19013 RNU6-656P-201ENST00000516785 107 ntBASIC0.84□□□□□ -2.27
KRT4P19013 SNORA40.17-201ENST00000517256 115 ntBASIC0.84□□□□□ -2.27
KRT4P19013 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
KRT4P19013 SNORA36.1-201ENST00000363424 132 ntBASIC0.83□□□□□ -2.28
KRT4P19013 RNU6-1162P-201ENST00000384443 104 ntBASIC0.83□□□□□ -2.28
KRT4P19013 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
KRT4P19013 RNA5SP147-201ENST00000516493 109 ntBASIC0.83□□□□□ -2.28
KRT4P19013 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.83□□□□□ -2.28
KRT4P19013 Y_RNA.407-201ENST00000383986 113 ntBASIC0.82□□□□□ -2.28
KRT4P19013 RNU6-321P-201ENST00000410912 106 ntBASIC0.82□□□□□ -2.28
KRT4P19013 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.82□□□□□ -2.28
KRT4P19013 TRMT112P2-201ENST00000512910 132 ntBASIC0.82□□□□□ -2.28
KRT4P19013 RNA5SP94-201ENST00000516917 108 ntBASIC0.82□□□□□ -2.28
KRT4P19013 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
KRT4P19013 MIR521-2-201ENST00000384818 87 ntBASIC0.81□□□□□ -2.28
KRT4P19013 SNORD110-201ENST00000408189 75 ntBASIC0.81□□□□□ -2.28
KRT4P19013 AC006210.1-201ENST00000424882 111 ntBASIC0.81□□□□□ -2.28
KRT4P19013 SCARNA17.3-201ENST00000516381 125 ntBASIC0.81□□□□□ -2.28
KRT4P19013 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
KRT4P19013 RNU6-1089P-201ENST00000516473 104 ntBASIC0.81□□□□□ -2.28
KRT4P19013 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
KRT4P19013 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRT4P19013 Y_RNA.327-201ENST00000365201 102 ntBASIC0.8□□□□□ -2.28
KRT4P19013 SNORA15B-2-201ENST00000384058 135 ntBASIC0.8□□□□□ -2.28
KRT4P19013 SNORA15B-1-201ENST00000384334 135 ntBASIC0.8□□□□□ -2.28
KRT4P19013 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
KRT4P19013 AC092634.7-201ENST00000621022 103 ntBASIC0.8□□□□□ -2.28
KRT4P19013 RNU6-302P-201ENST00000365249 107 ntBASIC0.79□□□□□ -2.28
KRT4P19013 MTND4LP19-201ENST00000403051 166 ntBASIC0.79□□□□□ -2.28
KRT4P19013 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
KRT4P19013 SCARNA21.1-201ENST00000515996 128 ntBASIC0.79□□□□□ -2.28
KRT4P19013 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
KRT4P19013 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
KRT4P19013 MIR7107-201ENST00000611489 80 ntBASIC0.79□□□□□ -2.28
KRT4P19013 SNORA25.5-201ENST00000363782 126 ntBASIC0.78□□□□□ -2.28
KRT4P19013 MIR652-201ENST00000385278 98 ntBASIC0.78□□□□□ -2.28
KRT4P19013 RNA5SP299-201ENST00000391203 116 ntBASIC0.78□□□□□ -2.28
KRT4P19013 AC021146.9-201ENST00000512503 156 ntBASIC0.78□□□□□ -2.28
KRT4P19013 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
KRT4P19013 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.78□□□□□ -2.28
KRT4P19013 RNU6-940P-201ENST00000363433 104 ntBASIC0.77□□□□□ -2.29
KRT4P19013 Y_RNA.633-201ENST00000459107 95 ntBASIC0.77□□□□□ -2.29
KRT4P19013 uc_338.10-201ENST00000621872 182 ntBASIC0.77□□□□□ -2.29
KRT4P19013 SNORA63.6-201ENST00000364921 119 ntBASIC0.76□□□□□ -2.29
KRT4P19013 AL157398.1-201ENST00000452981 186 ntBASIC0.76□□□□□ -2.29
KRT4P19013 MIR5706-201ENST00000579841 80 ntBASIC0.76□□□□□ -2.29
KRT4P19013 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
KRT4P19013 snoU13.13-201ENST00000458842 104 ntBASIC0.75□□□□□ -2.29
KRT4P19013 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
KRT4P19013 MIR548AE1-201ENST00000583292 70 ntBASIC0.75□□□□□ -2.29
KRT4P19013 MIR4473-201ENST00000583731 91 ntBASIC0.75□□□□□ -2.29
KRT4P19013 RNA5SP192-201ENST00000364404 120 ntBASIC0.74□□□□□ -2.29
KRT4P19013 RNU6-987P-201ENST00000384759 104 ntBASIC0.74□□□□□ -2.29
KRT4P19013 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
KRT4P19013 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
KRT4P19013 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
KRT4P19013 MIR548C-201ENST00000384815 97 ntBASIC0.73□□□□□ -2.29
KRT4P19013 MIR499A-201ENST00000384903 122 ntBASIC0.73□□□□□ -2.29
KRT4P19013 RNU4-37P-201ENST00000410214 84 ntBASIC0.73□□□□□ -2.29
KRT4P19013 AC079150.2-201ENST00000443733 78 ntBASIC0.73□□□□□ -2.29
KRT4P19013 SNORA70.25-201ENST00000612741 95 ntBASIC0.73□□□□□ -2.29
KRT4P19013 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
KRT4P19013 Y_RNA.164-201ENST00000363709 102 ntBASIC0.72□□□□□ -2.29
KRT4P19013 MIR633-201ENST00000384821 98 ntBASIC0.72□□□□□ -2.29
KRT4P19013 MIR517B-201ENST00000385102 67 ntBASIC0.72□□□□□ -2.29
KRT4P19013 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
KRT4P19013 MIR548E-201ENST00000408287 88 ntBASIC0.72□□□□□ -2.29
KRT4P19013 MIR466-201ENST00000580653 84 ntBASIC0.72□□□□□ -2.29
KRT4P19013 MIR548V-201ENST00000584165 80 ntBASIC0.72□□□□□ -2.29
KRT4P19013 RNU6-92P-201ENST00000605893 104 ntBASIC0.72□□□□□ -2.29
KRT4P19013 Y_RNA.125-201ENST00000363371 111 ntBASIC0.71□□□□□ -2.3
KRT4P19013 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
KRT4P19013 SNORA33.1-201ENST00000364957 130 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms