Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNORD114-25-201ENST00000363742 72 ntBASIC-0.84□□□□□ -2.54
XRCC1P18887 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.84□□□□□ -2.54
XRCC1P18887 MIR582-201ENST00000365731 98 ntBASIC-0.84□□□□□ -2.54
XRCC1P18887 RNU6-80P-201ENST00000384195 107 ntBASIC-0.84□□□□□ -2.54
XRCC1P18887 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.84□□□□□ -2.54
XRCC1P18887 snosnR66.1-201ENST00000391095 99 ntBASIC-0.84□□□□□ -2.54
XRCC1P18887 MIR518B-201ENST00000385127 83 ntBASIC-0.85□□□□□ -2.55
XRCC1P18887 RNU7-107P-201ENST00000459121 61 ntBASIC-0.85□□□□□ -2.55
XRCC1P18887 RNU6-476P-201ENST00000384726 107 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 SNORD42B-201ENST00000458893 67 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 RNU6-719P-201ENST00000516671 104 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR378F-201ENST00000578143 78 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR3179-1-201ENST00000578940 84 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR3179-2-201ENST00000579107 84 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR3179-3-201ENST00000579566 84 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR3613-201ENST00000579844 87 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR4499-201ENST00000584834 69 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR3179-4-201ENST00000617599 84 ntBASIC-0.86□□□□□ -2.55
XRCC1P18887 MIR548A3-201ENST00000385297 97 ntBASIC-0.87□□□□□ -2.55
XRCC1P18887 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
XRCC1P18887 RNU6-971P-201ENST00000516920 106 ntBASIC-0.87□□□□□ -2.55
XRCC1P18887 RNU6-794P-201ENST00000517261 64 ntBASIC-0.87□□□□□ -2.55
XRCC1P18887 AC103810.7-201ENST00000607821 91 ntBASIC-0.87□□□□□ -2.55
XRCC1P18887 MIR409-201ENST00000362237 79 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 RNU6-132P-201ENST00000383863 107 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 RNU6-10P-201ENST00000384036 107 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 MIR548A1-201ENST00000385041 97 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 SNORD57-201ENST00000448188 72 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.88□□□□□ -2.55
XRCC1P18887 AC097510.1-201ENST00000510945 133 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 MIR3064-201ENST00000581130 66 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 MIR5704-201ENST00000584029 77 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 AC104996.3-201ENST00000590718 94 ntBASIC-0.88□□□□□ -2.55
XRCC1P18887 RNU6-495P-201ENST00000362995 107 ntBASIC-0.89□□□□□ -2.55
XRCC1P18887 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.89□□□□□ -2.55
XRCC1P18887 SNORD4B-201ENST00000459083 72 ntBASIC-0.89□□□□□ -2.55
XRCC1P18887 SNORD22.1-201ENST00000516331 125 ntBASIC-0.89□□□□□ -2.55
XRCC1P18887 MIR6854-201ENST00000614935 69 ntBASIC-0.89□□□□□ -2.55
XRCC1P18887 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.9□□□□□ -2.55
XRCC1P18887 SNORD74.6-201ENST00000364796 70 ntBASIC-0.9□□□□□ -2.55
XRCC1P18887 RNU6-62P-201ENST00000516526 102 ntBASIC-0.9□□□□□ -2.55
XRCC1P18887 RNY1P9-201ENST00000532431 109 ntBASIC-0.9□□□□□ -2.55
XRCC1P18887 MIR548Z-201ENST00000584743 97 ntBASIC-0.9□□□□□ -2.55
XRCC1P18887 uc_338.19-201ENST00000616808 99 ntBASIC-0.9□□□□□ -2.55
XRCC1P18887 SNORA63.6-201ENST00000364921 119 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 MIR587-201ENST00000384845 96 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 RNU6-519P-201ENST00000410590 108 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.91□□□□□ -2.56
XRCC1P18887 SNORD33.1-201ENST00000516213 88 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 RNU6-255P-201ENST00000516957 105 ntBASIC-0.91□□□□□ -2.56
XRCC1P18887 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 MIR517B-201ENST00000385102 67 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 RNU7-24P-201ENST00000458867 62 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 AC022137.1-201ENST00000483735 151 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 RNU6-346P-201ENST00000516288 111 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 RNU6-412P-201ENST00000516434 106 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 RNU6-659P-201ENST00000516454 104 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 MIR3115-201ENST00000577915 68 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 MIR8068-201ENST00000618032 68 ntBASIC-0.92□□□□□ -2.56
XRCC1P18887 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 RNA5SP266-201ENST00000410273 108 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 RNU6-592P-201ENST00000411333 103 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 MIR4777-201ENST00000583710 86 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 AC090425.1-201ENST00000610007 140 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 snoR1.1-201ENST00000628177 80 ntBASIC-0.93□□□□□ -2.56
XRCC1P18887 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 SNORA24B-201ENST00000384176 131 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 RNU6-24P-201ENST00000384440 107 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 AP000533.3-201ENST00000447704 118 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 MIR3140-201ENST00000583685 90 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 MIR6773-201ENST00000612812 74 ntBASIC-0.94□□□□□ -2.56
XRCC1P18887 SNORD115-23-201ENST00000364461 82 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 RNU6-431P-201ENST00000383874 107 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 RNU6-907P-201ENST00000390924 102 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 RNU6-972P-201ENST00000391208 107 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 SNORD75.2-201ENST00000408784 58 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 MTATP6P29-201ENST00000415057 132 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 RNU6-274P-201ENST00000459566 107 ntBASIC-0.95□□□□□ -2.56
XRCC1P18887 RNU6-880P-201ENST00000384526 107 ntBASIC-0.96□□□□□ -2.56
XRCC1P18887 RNA5SP461-201ENST00000516451 104 ntBASIC-0.96□□□□□ -2.56
XRCC1P18887 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.96□□□□□ -2.56
XRCC1P18887 AL627230.5-201ENST00000619807 58 ntBASIC-0.96□□□□□ -2.56
XRCC1P18887 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.97□□□□□ -2.56
XRCC1P18887 RNU6-905P-201ENST00000384434 107 ntBASIC-0.97□□□□□ -2.56
XRCC1P18887 MIRLET7B-201ENST00000385140 83 ntBASIC-0.97□□□□□ -2.56
XRCC1P18887 SNORD64-201ENST00000386683 67 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms