Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SNORD41.1-201ENST00000391000 69 ntBASIC0.92□□□□□ -2.26
COL11A2P13942 RNU6-539P-201ENST00000516665 103 ntBASIC0.92□□□□□ -2.26
COL11A2P13942 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.92□□□□□ -2.26
COL11A2P13942 MIR4484-201ENST00000582855 83 ntBASIC0.92□□□□□ -2.26
COL11A2P13942 MIR6835-201ENST00000621552 64 ntBASIC0.92□□□□□ -2.26
COL11A2P13942 AL162376.1-201ENST00000624117 175 ntBASIC0.92□□□□□ -2.26
COL11A2P13942 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 MIR618-201ENST00000385287 98 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 RNU6-663P-201ENST00000391105 106 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 AC093423.1-201ENST00000440817 142 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
COL11A2P13942 RNU6-330P-201ENST00000363015 107 ntBASIC0.9□□□□□ -2.27
COL11A2P13942 SNORD45.1-201ENST00000363181 77 ntBASIC0.9□□□□□ -2.27
COL11A2P13942 MIR548L-201ENST00000408303 86 ntBASIC0.9□□□□□ -2.27
COL11A2P13942 SNORD75.2-201ENST00000408784 58 ntBASIC0.9□□□□□ -2.27
COL11A2P13942 AC244098.3-201ENST00000424803 96 ntBASIC0.9□□□□□ -2.27
COL11A2P13942 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
COL11A2P13942 RNU6-154P-201ENST00000384306 106 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 MIR573-201ENST00000384964 99 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 MIR548O2-201ENST00000616090 70 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 RNU6-382P-201ENST00000365181 106 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 RNU6V-201ENST00000384105 107 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 RNU7-104P-201ENST00000459398 79 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
COL11A2P13942 U6.81-201ENST00000612550 106 ntBASIC0.89□□□□□ -2.27
COL11A2P13942 SNORD113.1-201ENST00000363280 73 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 SNORD114-4-201ENST00000363962 75 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 RNU6-471P-201ENST00000383944 106 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 RNU6-540P-201ENST00000384622 101 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 RNA5SP121-201ENST00000516537 101 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 RNA5SP47-201ENST00000517230 109 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 AL109933.3-201ENST00000619095 188 ntBASIC0.88□□□□□ -2.27
COL11A2P13942 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
COL11A2P13942 SNORD18A-201ENST00000363753 72 ntBASIC0.87□□□□□ -2.27
COL11A2P13942 MT-TY-201ENST00000387409 66 ntBASIC0.87□□□□□ -2.27
COL11A2P13942 RNU6-1335P-201ENST00000365426 107 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 MIR203A-201ENST00000384836 110 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 SNORD30.1-201ENST00000391309 70 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 MIR4773-1-201ENST00000637203 78 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
COL11A2P13942 SNORD115-31-201ENST00000365318 82 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 RNU6-260P-201ENST00000384092 107 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 MIR3612-201ENST00000579753 87 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 MIR6739-201ENST00000622461 75 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 MIR924-201ENST00000638017 53 ntBASIC0.86□□□□□ -2.27
COL11A2P13942 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
COL11A2P13942 RNU6-752P-201ENST00000516376 102 ntBASIC0.85□□□□□ -2.27
COL11A2P13942 MIR8087-201ENST00000612745 78 ntBASIC0.85□□□□□ -2.27
COL11A2P13942 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
COL11A2P13942 Y_RNA.32-201ENST00000362589 110 ntBASIC0.84□□□□□ -2.27
COL11A2P13942 RNU6-649P-201ENST00000384463 107 ntBASIC0.84□□□□□ -2.27
COL11A2P13942 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
COL11A2P13942 AC125388.1-201ENST00000459631 156 ntBASIC0.84□□□□□ -2.28
COL11A2P13942 MIR2909-201ENST00000617113 69 ntBASIC0.84□□□□□ -2.28
COL11A2P13942 AC069503.3-201ENST00000618674 145 ntBASIC0.84□□□□□ -2.28
COL11A2P13942 AC073869.9-201ENST00000641610 120 ntBASIC0.84□□□□□ -2.28
COL11A2P13942 RNU1-141P-201ENST00000364623 158 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 Y_RNA.340-201ENST00000365330 92 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 SNORD45A-201ENST00000384512 84 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 RNU6-269P-201ENST00000391077 97 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 NAMPTP3-201ENST00000569273 224 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 MIR3657-201ENST00000584818 117 ntBASIC0.83□□□□□ -2.28
COL11A2P13942 Y_RNA.386-201ENST00000383913 105 ntBASIC0.82□□□□□ -2.28
COL11A2P13942 RNU6-1039P-201ENST00000383931 107 ntBASIC0.82□□□□□ -2.28
COL11A2P13942 SNORA8.2-201ENST00000384372 139 ntBASIC0.82□□□□□ -2.28
COL11A2P13942 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
COL11A2P13942 RNU6-229P-201ENST00000516614 102 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 AC005520.4-201ENST00000604337 90 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL11A2P13942 RNU6-54P-201ENST00000365563 107 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 VTRNA1-3-201ENST00000365645 89 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 RNU6-630P-201ENST00000391258 106 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 SNORD42B-201ENST00000458893 67 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 AC018659.1-201ENST00000551083 169 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 MIR6828-201ENST00000636181 60 ntBASIC0.81□□□□□ -2.28
COL11A2P13942 RNU5B-6P-201ENST00000516765 68 ntBASIC0.8□□□□□ -2.28
COL11A2P13942 uc_338.10-201ENST00000621872 182 ntBASIC0.8□□□□□ -2.28
COL11A2P13942 AC243829.3-201ENST00000622177 108 ntBASIC0.8□□□□□ -2.28
COL11A2P13942 Y_RNA.250-201ENST00000364542 110 ntBASIC0.79□□□□□ -2.28
COL11A2P13942 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
COL11A2P13942 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
COL11A2P13942 SCARNA16.5-201ENST00000517114 183 ntBASIC0.79□□□□□ -2.28
COL11A2P13942 MIR4460-201ENST00000577862 86 ntBASIC0.79□□□□□ -2.28
COL11A2P13942 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
COL11A2P13942 SNORA36.1-201ENST00000363424 132 ntBASIC0.78□□□□□ -2.28
COL11A2P13942 MIR1197-201ENST00000408818 88 ntBASIC0.78□□□□□ -2.28
COL11A2P13942 RNU6-542P-201ENST00000516405 103 ntBASIC0.78□□□□□ -2.28
COL11A2P13942 MIR6086-201ENST00000638065 55 ntBASIC0.78□□□□□ -2.28
COL11A2P13942 MIR518A1-201ENST00000385068 85 ntBASIC0.77□□□□□ -2.29
COL11A2P13942 MIR1265-201ENST00000408444 86 ntBASIC0.76□□□□□ -2.29
COL11A2P13942 RNU6-982P-201ENST00000516216 102 ntBASIC0.76□□□□□ -2.29
COL11A2P13942 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
COL11A2P13942 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
COL11A2P13942 RNA5SP215-201ENST00000363440 122 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms