Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR518B-201ENST00000385127 83 ntBASIC-0.79□□□□□ -2.54
VIMP08670 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.8□□□□□ -2.54
VIMP08670 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.8□□□□□ -2.54
VIMP08670 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.8□□□□□ -2.54
VIMP08670 RNU4-36P-201ENST00000364294 144 ntBASIC-0.8□□□□□ -2.54
VIMP08670 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
VIMP08670 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.8□□□□□ -2.54
VIMP08670 MIR3179-1-201ENST00000578940 84 ntBASIC-0.8□□□□□ -2.54
VIMP08670 MIR3179-2-201ENST00000579107 84 ntBASIC-0.8□□□□□ -2.54
VIMP08670 MIR3179-3-201ENST00000579566 84 ntBASIC-0.8□□□□□ -2.54
VIMP08670 MIR3179-4-201ENST00000617599 84 ntBASIC-0.8□□□□□ -2.54
VIMP08670 SNORD114-15-201ENST00000364687 72 ntBASIC-0.81□□□□□ -2.54
VIMP08670 RNU6-973P-201ENST00000364690 107 ntBASIC-0.81□□□□□ -2.54
VIMP08670 MIR548U-201ENST00000390728 81 ntBASIC-0.81□□□□□ -2.54
VIMP08670 MIR548AX-201ENST00000580117 73 ntBASIC-0.81□□□□□ -2.54
VIMP08670 MIR3064-201ENST00000581130 66 ntBASIC-0.81□□□□□ -2.54
VIMP08670 MIR4324-201ENST00000584846 72 ntBASIC-0.81□□□□□ -2.54
VIMP08670 MIR6738-201ENST00000619620 64 ntBASIC-0.81□□□□□ -2.54
VIMP08670 RNU6-476P-201ENST00000384726 107 ntBASIC-0.82□□□□□ -2.54
VIMP08670 MIR4777-201ENST00000583710 86 ntBASIC-0.82□□□□□ -2.54
VIMP08670 MIR548Z-201ENST00000584743 97 ntBASIC-0.82□□□□□ -2.54
VIMP08670 SNORD4B-201ENST00000459083 72 ntBASIC-0.83□□□□□ -2.54
VIMP08670 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.83□□□□□ -2.54
VIMP08670 RNU6-795P-201ENST00000516323 103 ntBASIC-0.83□□□□□ -2.54
VIMP08670 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.84□□□□□ -2.54
VIMP08670 SNORA63.2-201ENST00000362603 126 ntBASIC-0.84□□□□□ -2.54
VIMP08670 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.84□□□□□ -2.54
VIMP08670 AL500527.2-201ENST00000454105 95 ntBASIC-0.84□□□□□ -2.54
VIMP08670 RNU6-274P-201ENST00000459566 107 ntBASIC-0.84□□□□□ -2.54
VIMP08670 SNORD22.1-201ENST00000516331 125 ntBASIC-0.84□□□□□ -2.54
VIMP08670 MIR3140-201ENST00000583685 90 ntBASIC-0.84□□□□□ -2.54
VIMP08670 AC104996.3-201ENST00000590718 94 ntBASIC-0.84□□□□□ -2.54
VIMP08670 uc_338.19-201ENST00000616808 99 ntBASIC-0.84□□□□□ -2.54
VIMP08670 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
VIMP08670 MIR7-2-201ENST00000384970 110 ntBASIC-0.85□□□□□ -2.55
VIMP08670 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
VIMP08670 RNU6-721P-201ENST00000410155 105 ntBASIC-0.85□□□□□ -2.55
VIMP08670 RNA5SP470-201ENST00000516463 106 ntBASIC-0.85□□□□□ -2.55
VIMP08670 MIR378F-201ENST00000578143 78 ntBASIC-0.85□□□□□ -2.55
VIMP08670 MIR4499-201ENST00000584834 69 ntBASIC-0.85□□□□□ -2.55
VIMP08670 AC012531.4-201ENST00000616509 177 ntBASIC-0.85□□□□□ -2.55
VIMP08670 MIR8068-201ENST00000618032 68 ntBASIC-0.85□□□□□ -2.55
VIMP08670 SNORD74.6-201ENST00000364796 70 ntBASIC-0.86□□□□□ -2.55
VIMP08670 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.86□□□□□ -2.55
VIMP08670 RNU6-10P-201ENST00000384036 107 ntBASIC-0.86□□□□□ -2.55
VIMP08670 RNU6-35P-201ENST00000384530 107 ntBASIC-0.86□□□□□ -2.55
VIMP08670 RNU6-519P-201ENST00000410590 108 ntBASIC-0.86□□□□□ -2.55
VIMP08670 AC022137.1-201ENST00000483735 151 ntBASIC-0.86□□□□□ -2.55
VIMP08670 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.86□□□□□ -2.55
VIMP08670 MIR6854-201ENST00000614935 69 ntBASIC-0.86□□□□□ -2.55
VIMP08670 SNORD116-14-201ENST00000383894 92 ntBASIC-0.87□□□□□ -2.55
VIMP08670 SNORD116-17-201ENST00000383929 92 ntBASIC-0.87□□□□□ -2.55
VIMP08670 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.87□□□□□ -2.55
VIMP08670 RNU6-24P-201ENST00000384440 107 ntBASIC-0.87□□□□□ -2.55
VIMP08670 SNORD116-15-201ENST00000384445 92 ntBASIC-0.87□□□□□ -2.55
VIMP08670 SNORD116-19-201ENST00000384729 92 ntBASIC-0.87□□□□□ -2.55
VIMP08670 snoR1.1-201ENST00000628177 80 ntBASIC-0.87□□□□□ -2.55
VIMP08670 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.88□□□□□ -2.55
VIMP08670 RNU6-880P-201ENST00000384526 107 ntBASIC-0.88□□□□□ -2.55
VIMP08670 MIR587-201ENST00000384845 96 ntBASIC-0.88□□□□□ -2.55
VIMP08670 MIR517B-201ENST00000385102 67 ntBASIC-0.88□□□□□ -2.55
VIMP08670 AP000533.3-201ENST00000447704 118 ntBASIC-0.88□□□□□ -2.55
VIMP08670 MIR7111-201ENST00000619751 72 ntBASIC-0.88□□□□□ -2.55
VIMP08670 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.89□□□□□ -2.55
VIMP08670 RNU6-495P-201ENST00000362995 107 ntBASIC-0.89□□□□□ -2.55
VIMP08670 RNY4P3-201ENST00000365254 95 ntBASIC-0.89□□□□□ -2.55
VIMP08670 RNU6-209P-201ENST00000384118 107 ntBASIC-0.89□□□□□ -2.55
VIMP08670 SNORD116-21-201ENST00000384507 92 ntBASIC-0.89□□□□□ -2.55
VIMP08670 RNU6-412P-201ENST00000516434 106 ntBASIC-0.89□□□□□ -2.55
VIMP08670 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.9□□□□□ -2.55
VIMP08670 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.9□□□□□ -2.55
VIMP08670 MIR3133-201ENST00000583157 78 ntBASIC-0.9□□□□□ -2.55
VIMP08670 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.91□□□□□ -2.56
VIMP08670 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.91□□□□□ -2.56
VIMP08670 SNORA24B-201ENST00000384176 131 ntBASIC-0.91□□□□□ -2.56
VIMP08670 RNU6-905P-201ENST00000384434 107 ntBASIC-0.91□□□□□ -2.56
VIMP08670 RNU6-30P-201ENST00000384561 107 ntBASIC-0.91□□□□□ -2.56
VIMP08670 RNA5SP292-201ENST00000390974 118 ntBASIC-0.91□□□□□ -2.56
VIMP08670 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
VIMP08670 SNORA19.1-201ENST00000410656 129 ntBASIC-0.91□□□□□ -2.56
VIMP08670 snoU13.19-201ENST00000459148 104 ntBASIC-0.91□□□□□ -2.56
VIMP08670 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.91□□□□□ -2.56
VIMP08670 MIR6773-201ENST00000612812 74 ntBASIC-0.91□□□□□ -2.56
VIMP08670 RNU6-990P-201ENST00000364385 104 ntBASIC-0.92□□□□□ -2.56
VIMP08670 RNA5SP192-201ENST00000364404 120 ntBASIC-0.92□□□□□ -2.56
VIMP08670 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.92□□□□□ -2.56
VIMP08670 MIR548I1-201ENST00000408810 149 ntBASIC-0.92□□□□□ -2.56
VIMP08670 SCARNA23-201ENST00000516060 130 ntBASIC-0.92□□□□□ -2.56
VIMP08670 RNA5SP67-201ENST00000516422 131 ntBASIC-0.92□□□□□ -2.56
VIMP08670 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.92□□□□□ -2.56
VIMP08670 SNORA63.6-201ENST00000364921 119 ntBASIC-0.93□□□□□ -2.56
VIMP08670 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.93□□□□□ -2.56
VIMP08670 RNU6-904P-201ENST00000516206 101 ntBASIC-0.93□□□□□ -2.56
VIMP08670 RNU6-62P-201ENST00000516526 102 ntBASIC-0.93□□□□□ -2.56
VIMP08670 MIR3165-201ENST00000579874 75 ntBASIC-0.93□□□□□ -2.56
VIMP08670 RNU6-774P-201ENST00000363238 107 ntBASIC-0.94□□□□□ -2.56
VIMP08670 RNU6-972P-201ENST00000391208 107 ntBASIC-0.94□□□□□ -2.56
VIMP08670 MIR3115-201ENST00000577915 68 ntBASIC-0.94□□□□□ -2.56
VIMP08670 MIR3671-201ENST00000580455 88 ntBASIC-0.94□□□□□ -2.56
VIMP08670 MIR4306-201ENST00000583390 91 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms