Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 RNU6-519P-201ENST00000410590 108 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 MIR3163-201ENST00000581592 73 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 SNORD113-8-201ENST00000363497 74 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 RNU6-681P-201ENST00000364012 104 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 MIR548AA1-201ENST00000384971 97 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 SNORD2.1-201ENST00000458762 69 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 RNU6-752P-201ENST00000516376 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 AC109635.3-201ENST00000529536 185 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 RNY4P10-201ENST00000365571 96 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 SNORA24B-201ENST00000384176 131 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MTND3P22-201ENST00000510932 243 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 RNU6-861P-201ENST00000516745 106 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MIR3611-201ENST00000584484 83 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 RNU6-643P-201ENST00000384018 107 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MIR509-1-201ENST00000385265 94 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MIR509-2-201ENST00000390724 91 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 SNORA18.5-201ENST00000516616 101 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 AC119751.7-201ENST00000600494 245 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 SNORA25.1-201ENST00000362326 128 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 RNU6-340P-201ENST00000364005 107 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 SNORD81.2-201ENST00000365153 76 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 RNU7-174P-201ENST00000516248 59 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 RNU6-247P-201ENST00000362636 107 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 MIR3613-201ENST00000579844 87 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 SNORD116-29-201ENST00000384516 83 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 RNU7-151P-201ENST00000516930 53 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 AC006362.1-201ENST00000567392 174 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 RNU6-645P-201ENST00000364649 106 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
SPTA1P02549 RNU6-816P-201ENST00000390914 107 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 RNU6-483P-201ENST00000384088 108 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 RNU6-121P-201ENST00000410525 99 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 SNORA7.5-201ENST00000410672 110 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 AL121914.1-201ENST00000450188 156 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 AL132765.2-201ENST00000610812 351 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 MIR548N-201ENST00000408742 75 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 RNU6-290P-201ENST00000365212 101 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 SNORA63.7-201ENST00000365579 123 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR630-201ENST00000384957 97 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 SNORA40.14-201ENST00000516543 86 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 SNORD1B-201ENST00000363091 84 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 RNY1P1-201ENST00000364372 112 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR577-201ENST00000385196 96 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR3121-201ENST00000579680 77 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 AC104985.2-201ENST00000620598 500 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR5690-201ENST00000583739 73 ntBASIC-1.94□□□□□ -2.72
SPTA1P02549 RNU6-768P-201ENST00000384683 107 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-238P-201ENST00000363313 106 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-770P-201ENST00000363929 105 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 MIR581-201ENST00000384895 96 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-578P-201ENST00000390980 103 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 SNORD11.1-201ENST00000459482 85 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-698P-201ENST00000363523 107 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-912P-201ENST00000363800 104 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-34P-201ENST00000364874 107 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-129P-201ENST00000391022 107 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 SNORD63.2-201ENST00000516303 64 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 MIR548Z-201ENST00000584743 97 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-493P-201ENST00000391321 108 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-982P-201ENST00000516216 102 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.97□□□□□ -2.72
SPTA1P02549 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
SPTA1P02549 MTND1P29-201ENST00000448112 647 ntBASIC-1.97□□□□□ -2.72
SPTA1P02549 SNORD113-3-201ENST00000364830 72 ntBASIC-1.97□□□□□ -2.73
SPTA1P02549 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.97□□□□□ -2.73
SPTA1P02549 MIR548D2-201ENST00000384955 97 ntBASIC-1.97□□□□□ -2.73
SPTA1P02549 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 RNY4P14-201ENST00000363656 96 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms