Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
NPM3O75607 MIR4524B-201ENST00000581569 115 ntBASIC2.58□□□□□ -2
NPM3O75607 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
NPM3O75607 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
NPM3O75607 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
NPM3O75607 AC012493.3-201ENST00000604494 112 ntBASIC2.58□□□□□ -2
NPM3O75607 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
NPM3O75607 RNU6-838P-201ENST00000363399 108 ntBASIC2.57□□□□□ -2
NPM3O75607 RNA5SP37-201ENST00000365420 130 ntBASIC2.57□□□□□ -2
NPM3O75607 MIR4285-201ENST00000581001 85 ntBASIC2.57□□□□□ -2
NPM3O75607 RNU6-172P-201ENST00000411000 93 ntBASIC2.56□□□□□ -2
NPM3O75607 AC090617.8-201ENST00000623339 167 ntBASIC2.56□□□□□ -2
NPM3O75607 MIR18A-201ENST00000362310 71 ntBASIC2.55□□□□□ -2
NPM3O75607 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPM3O75607 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
NPM3O75607 SNORA36.1-201ENST00000363424 132 ntBASIC2.54□□□□□ -2
NPM3O75607 RNU7-154P-201ENST00000516194 62 ntBASIC2.53□□□□□ -2
NPM3O75607 MIR4769-201ENST00000584126 77 ntBASIC2.52□□□□□ -2.01
NPM3O75607 MIR764-201ENST00000390811 85 ntBASIC2.51□□□□□ -2.01
NPM3O75607 SNORD124-201ENST00000459577 104 ntBASIC2.51□□□□□ -2.01
NPM3O75607 MIR7107-201ENST00000611489 80 ntBASIC2.51□□□□□ -2.01
NPM3O75607 SNORD1B-201ENST00000363091 84 ntBASIC2.5□□□□□ -2.01
NPM3O75607 RNA5SP470-201ENST00000516463 106 ntBASIC2.5□□□□□ -2.01
NPM3O75607 AC011195.1-201ENST00000578177 177 ntBASIC2.49□□□□□ -2.01
NPM3O75607 MIR5706-201ENST00000579841 80 ntBASIC2.48□□□□□ -2.01
NPM3O75607 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPM3O75607 RNU6-247P-201ENST00000362636 107 ntBASIC2.47□□□□□ -2.01
NPM3O75607 SNORD114-24-201ENST00000365029 72 ntBASIC2.47□□□□□ -2.01
NPM3O75607 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
NPM3O75607 RNA5SP94-201ENST00000516917 108 ntBASIC2.47□□□□□ -2.01
NPM3O75607 SNORA70.25-201ENST00000612741 95 ntBASIC2.47□□□□□ -2.01
NPM3O75607 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
NPM3O75607 RNA5SP182-201ENST00000516064 82 ntBASIC2.46□□□□□ -2.02
NPM3O75607 RNU6-419P-201ENST00000517030 63 ntBASIC2.46□□□□□ -2.02
NPM3O75607 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
NPM3O75607 MIR545-201ENST00000385085 106 ntBASIC2.45□□□□□ -2.02
NPM3O75607 RNU6-482P-201ENST00000391068 107 ntBASIC2.45□□□□□ -2.02
NPM3O75607 SNORD115-25-201ENST00000362619 82 ntBASIC2.44□□□□□ -2.02
NPM3O75607 SNORD114-29-201ENST00000364819 70 ntBASIC2.43□□□□□ -2.02
NPM3O75607 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.43□□□□□ -2.02
NPM3O75607 HMGN2P22-201ENST00000427588 175 ntBASIC2.43□□□□□ -2.02
NPM3O75607 RNA5SP255-201ENST00000516370 107 ntBASIC2.43□□□□□ -2.02
NPM3O75607 Y_RNA.109-201ENST00000363215 102 ntBASIC2.42□□□□□ -2.02
NPM3O75607 SNORD99-201ENST00000408612 74 ntBASIC2.42□□□□□ -2.02
NPM3O75607 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
NPM3O75607 RNU6-295P-201ENST00000516901 104 ntBASIC2.42□□□□□ -2.02
NPM3O75607 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.42□□□□□ -2.02
NPM3O75607 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPM3O75607 MIR618-201ENST00000385287 98 ntBASIC2.4□□□□□ -2.03
NPM3O75607 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.4□□□□□ -2.03
NPM3O75607 MIR4490-201ENST00000582647 84 ntBASIC2.4□□□□□ -2.03
NPM3O75607 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.03
NPM3O75607 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.39□□□□□ -2.03
NPM3O75607 MIR6773-201ENST00000612812 74 ntBASIC2.39□□□□□ -2.03
NPM3O75607 AL603825.1-201ENST00000438481 80 ntBASIC2.38□□□□□ -2.03
NPM3O75607 U7.6-201ENST00000610841 64 ntBASIC2.38□□□□□ -2.03
NPM3O75607 MIR6845-201ENST00000613182 61 ntBASIC2.38□□□□□ -2.03
NPM3O75607 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
NPM3O75607 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.37□□□□□ -2.03
NPM3O75607 RNU6-458P-201ENST00000384179 107 ntBASIC2.37□□□□□ -2.03
NPM3O75607 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
NPM3O75607 U6.58-201ENST00000613107 107 ntBASIC2.37□□□□□ -2.03
NPM3O75607 RNU6-337P-201ENST00000391243 106 ntBASIC2.36□□□□□ -2.03
NPM3O75607 RNU7-160P-201ENST00000516660 62 ntBASIC2.36□□□□□ -2.03
NPM3O75607 MIR4752-201ENST00000579672 72 ntBASIC2.36□□□□□ -2.03
NPM3O75607 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
NPM3O75607 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
NPM3O75607 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
NPM3O75607 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
NPM3O75607 AL353997.5-201ENST00000618886 171 ntBASIC2.33□□□□□ -2.04
NPM3O75607 RNY1P8-201ENST00000383970 114 ntBASIC2.32□□□□□ -2.04
NPM3O75607 MIR548AG1-201ENST00000579932 66 ntBASIC2.31□□□□□ -2.04
NPM3O75607 SNORD26-201ENST00000384147 75 ntBASIC2.3□□□□□ -2.04
NPM3O75607 MIR4255-201ENST00000579351 72 ntBASIC2.3□□□□□ -2.04
NPM3O75607 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC2.3□□□□□ -2.04
NPM3O75607 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NPM3O75607 RNU1-124P-201ENST00000363861 145 ntBASIC2.29□□□□□ -2.04
NPM3O75607 RNA5SP99-201ENST00000364020 114 ntBASIC2.29□□□□□ -2.04
NPM3O75607 RNA5SP222-201ENST00000411039 105 ntBASIC2.29□□□□□ -2.04
NPM3O75607 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC2.29□□□□□ -2.04
NPM3O75607 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPM3O75607 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NPM3O75607 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NPM3O75607 RNU6-1206P-201ENST00000516339 103 ntBASIC2.27□□□□□ -2.05
NPM3O75607 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.26□□□□□ -2.05
NPM3O75607 MIRLET7B-201ENST00000385140 83 ntBASIC2.26□□□□□ -2.05
NPM3O75607 RNA5SP404-201ENST00000517118 132 ntBASIC2.25□□□□□ -2.05
NPM3O75607 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
NPM3O75607 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.24□□□□□ -2.05
NPM3O75607 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
NPM3O75607 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
NPM3O75607 MIR9-3-201ENST00000385084 90 ntBASIC2.23□□□□□ -2.05
NPM3O75607 RNU7-188P-201ENST00000517063 64 ntBASIC2.23□□□□□ -2.05
NPM3O75607 RNU1-29P-201ENST00000606574 126 ntBASIC2.23□□□□□ -2.05
NPM3O75607 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
NPM3O75607 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
NPM3O75607 Y_RNA.224-201ENST00000364308 111 ntBASIC2.21□□□□□ -2.06
NPM3O75607 SNORA2A-201ENST00000383885 135 ntBASIC2.21□□□□□ -2.06
NPM3O75607 RPS29P23-201ENST00000458635 123 ntBASIC2.21□□□□□ -2.06
NPM3O75607 RNA5SP458-201ENST00000516188 119 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms