Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MIR548AD-201ENST00000584780 82 ntBASIC1.81□□□□□ -2.12
RNF40O75150 uc_338.10-201ENST00000621872 182 ntBASIC1.81□□□□□ -2.12
RNF40O75150 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RNF40O75150 SNORD89-201ENST00000390981 114 ntBASIC1.8□□□□□ -2.12
RNF40O75150 MIR548E-201ENST00000408287 88 ntBASIC1.8□□□□□ -2.12
RNF40O75150 RNU6-321P-201ENST00000410912 106 ntBASIC1.8□□□□□ -2.12
RNF40O75150 MIR4303-201ENST00000581299 66 ntBASIC1.8□□□□□ -2.12
RNF40O75150 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
RNF40O75150 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RNF40O75150 RNU6-980P-201ENST00000516925 103 ntBASIC1.79□□□□□ -2.12
RNF40O75150 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RNF40O75150 SNORA25-201ENST00000384384 134 ntBASIC1.78□□□□□ -2.12
RNF40O75150 MIR652-201ENST00000385278 98 ntBASIC1.78□□□□□ -2.12
RNF40O75150 SNORA67.5-201ENST00000391036 107 ntBASIC1.78□□□□□ -2.12
RNF40O75150 MIR1287-201ENST00000408492 90 ntBASIC1.78□□□□□ -2.12
RNF40O75150 AP1B1P2-201ENST00000416196 106 ntBASIC1.78□□□□□ -2.12
RNF40O75150 MIR3612-201ENST00000579753 87 ntBASIC1.78□□□□□ -2.12
RNF40O75150 MIR548AE1-201ENST00000583292 70 ntBASIC1.78□□□□□ -2.12
RNF40O75150 MIR19B1-201ENST00000384829 87 ntBASIC1.77□□□□□ -2.13
RNF40O75150 Y_RNA.407-201ENST00000383986 113 ntBASIC1.76□□□□□ -2.13
RNF40O75150 MIR222-201ENST00000384992 110 ntBASIC1.76□□□□□ -2.13
RNF40O75150 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RNF40O75150 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
RNF40O75150 Y_RNA.325-201ENST00000365171 122 ntBASIC1.75□□□□□ -2.13
RNF40O75150 RNU6-997P-201ENST00000384725 107 ntBASIC1.75□□□□□ -2.13
RNF40O75150 RNU6-1246P-201ENST00000391064 107 ntBASIC1.75□□□□□ -2.13
RNF40O75150 FABP5P4-201ENST00000437203 171 ntBASIC1.75□□□□□ -2.13
RNF40O75150 Y_RNA.246-201ENST00000364495 108 ntBASIC1.74□□□□□ -2.13
RNF40O75150 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
RNF40O75150 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
RNF40O75150 RNA5SP327-201ENST00000362494 101 ntBASIC1.73□□□□□ -2.13
RNF40O75150 RNU6-753P-201ENST00000363926 107 ntBASIC1.73□□□□□ -2.13
RNF40O75150 RNU6-231P-201ENST00000517122 103 ntBASIC1.73□□□□□ -2.13
RNF40O75150 SNORA36.1-201ENST00000363424 132 ntBASIC1.72□□□□□ -2.13
RNF40O75150 RNU7-119P-201ENST00000459279 63 ntBASIC1.72□□□□□ -2.13
RNF40O75150 RNU7-95P-201ENST00000459222 64 ntBASIC1.71□□□□□ -2.14
RNF40O75150 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
RNF40O75150 MIR8070-201ENST00000616510 88 ntBASIC1.71□□□□□ -2.14
RNF40O75150 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RNF40O75150 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
RNF40O75150 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF40O75150 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.69□□□□□ -2.14
RNF40O75150 SNORA9.1-201ENST00000362412 131 ntBASIC1.68□□□□□ -2.14
RNF40O75150 RNU6-35P-201ENST00000384530 107 ntBASIC1.68□□□□□ -2.14
RNF40O75150 SNORD116-16-201ENST00000384533 92 ntBASIC1.68□□□□□ -2.14
RNF40O75150 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
RNF40O75150 SNORA40.16-201ENST00000517238 121 ntBASIC1.68□□□□□ -2.14
RNF40O75150 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
RNF40O75150 MIR4473-201ENST00000583731 91 ntBASIC1.68□□□□□ -2.14
RNF40O75150 MIR7111-201ENST00000619751 72 ntBASIC1.68□□□□□ -2.14
RNF40O75150 AC090617.8-201ENST00000623339 167 ntBASIC1.68□□□□□ -2.14
RNF40O75150 SNORD124-201ENST00000459577 104 ntBASIC1.67□□□□□ -2.14
RNF40O75150 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
RNF40O75150 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
RNF40O75150 MIR499A-201ENST00000384903 122 ntBASIC1.66□□□□□ -2.14
RNF40O75150 AC006210.1-201ENST00000424882 111 ntBASIC1.66□□□□□ -2.14
RNF40O75150 RNA5SP227-201ENST00000516184 113 ntBASIC1.66□□□□□ -2.14
RNF40O75150 MIR200A-201ENST00000384875 90 ntBASIC1.65□□□□□ -2.15
RNF40O75150 CYP3A54P-201ENST00000566950 75 ntBASIC1.65□□□□□ -2.15
RNF40O75150 MIR7107-201ENST00000611489 80 ntBASIC1.65□□□□□ -2.15
RNF40O75150 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
RNF40O75150 MIR18A-201ENST00000362310 71 ntBASIC1.64□□□□□ -2.15
RNF40O75150 MIR516B1-201ENST00000385211 90 ntBASIC1.64□□□□□ -2.15
RNF40O75150 SNORD110-201ENST00000408189 75 ntBASIC1.64□□□□□ -2.15
RNF40O75150 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.64□□□□□ -2.15
RNF40O75150 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RNF40O75150 SNORA25.8-201ENST00000364831 128 ntBASIC1.63□□□□□ -2.15
RNF40O75150 AL021921.1-201ENST00000442774 93 ntBASIC1.63□□□□□ -2.15
RNF40O75150 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.63□□□□□ -2.15
RNF40O75150 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
RNF40O75150 AC243829.3-201ENST00000622177 108 ntBASIC1.63□□□□□ -2.15
RNF40O75150 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RNF40O75150 Y_RNA.74-201ENST00000362911 99 ntBASIC1.62□□□□□ -2.15
RNF40O75150 Y_RNA.327-201ENST00000365201 102 ntBASIC1.62□□□□□ -2.15
RNF40O75150 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
RNF40O75150 RNA5SP268-201ENST00000516828 124 ntBASIC1.62□□□□□ -2.15
RNF40O75150 SNORA70.25-201ENST00000612741 95 ntBASIC1.62□□□□□ -2.15
RNF40O75150 RNU1-29P-201ENST00000606574 126 ntBASIC1.61□□□□□ -2.15
RNF40O75150 Y_RNA.118-201ENST00000363300 101 ntBASIC1.6□□□□□ -2.15
RNF40O75150 RNU4-33P-201ENST00000364316 85 ntBASIC1.6□□□□□ -2.15
RNF40O75150 Y_RNA.282-201ENST00000364793 102 ntBASIC1.6□□□□□ -2.15
RNF40O75150 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
RNF40O75150 RNU6-518P-201ENST00000516056 96 ntBASIC1.6□□□□□ -2.15
RNF40O75150 RNA5SP255-201ENST00000516370 107 ntBASIC1.6□□□□□ -2.15
RNF40O75150 RNA5SP94-201ENST00000516917 108 ntBASIC1.6□□□□□ -2.15
RNF40O75150 AC025627.3-201ENST00000582078 182 ntBASIC1.6□□□□□ -2.15
RNF40O75150 MIR7974-201ENST00000615835 79 ntBASIC1.6□□□□□ -2.15
RNF40O75150 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RNF40O75150 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RNF40O75150 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RNF40O75150 MIR1323-201ENST00000408090 73 ntBASIC1.59□□□□□ -2.15
RNF40O75150 HMGN2P22-201ENST00000427588 175 ntBASIC1.59□□□□□ -2.15
RNF40O75150 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
RNF40O75150 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
RNF40O75150 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
RNF40O75150 U6.96-201ENST00000636425 70 ntBASIC1.58□□□□□ -2.16
RNF40O75150 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF40O75150 Y_RNA.355-201ENST00000365462 98 ntBASIC1.57□□□□□ -2.16
RNF40O75150 MIR548F3-201ENST00000408509 87 ntBASIC1.57□□□□□ -2.16
RNF40O75150 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms