Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU6-557P-201ENST00000516842 110 ntBASIC0.63□□□□□ -2.31
PROM1O43490 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
PROM1O43490 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
PROM1O43490 MIR4752-201ENST00000579672 72 ntBASIC0.63□□□□□ -2.31
PROM1O43490 MIR4712-201ENST00000583750 82 ntBASIC0.63□□□□□ -2.31
PROM1O43490 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
PROM1O43490 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
PROM1O43490 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
PROM1O43490 RNU6-1177P-201ENST00000391058 104 ntBASIC0.62□□□□□ -2.31
PROM1O43490 AC006210.1-201ENST00000424882 111 ntBASIC0.62□□□□□ -2.31
PROM1O43490 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
PROM1O43490 AC069271.1-201ENST00000445577 156 ntBASIC0.62□□□□□ -2.31
PROM1O43490 AC073869.9-201ENST00000641610 120 ntBASIC0.62□□□□□ -2.31
PROM1O43490 Y_RNA.12-201ENST00000362393 112 ntBASIC0.61□□□□□ -2.31
PROM1O43490 RNU6-315P-201ENST00000362666 107 ntBASIC0.61□□□□□ -2.31
PROM1O43490 RNU6V-201ENST00000384105 107 ntBASIC0.61□□□□□ -2.31
PROM1O43490 SNORA24B-201ENST00000384176 131 ntBASIC0.61□□□□□ -2.31
PROM1O43490 MIR6086-201ENST00000638065 55 ntBASIC0.61□□□□□ -2.31
PROM1O43490 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
PROM1O43490 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
PROM1O43490 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
PROM1O43490 AC097510.1-201ENST00000510945 133 ntBASIC0.6□□□□□ -2.31
PROM1O43490 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
PROM1O43490 Y_RNA.685-201ENST00000516532 108 ntBASIC0.6□□□□□ -2.31
PROM1O43490 MIR548O2-201ENST00000616090 70 ntBASIC0.6□□□□□ -2.31
PROM1O43490 MIRLET7A1-201ENST00000362295 80 ntBASIC0.59□□□□□ -2.31
PROM1O43490 RNU6-1094P-201ENST00000362416 104 ntBASIC0.59□□□□□ -2.31
PROM1O43490 Y_RNA.94-201ENST00000363068 106 ntBASIC0.59□□□□□ -2.31
PROM1O43490 RNU6-54P-201ENST00000365563 107 ntBASIC0.59□□□□□ -2.31
PROM1O43490 MT-TY-201ENST00000387409 66 ntBASIC0.59□□□□□ -2.31
PROM1O43490 SNORD110-201ENST00000408189 75 ntBASIC0.59□□□□□ -2.31
PROM1O43490 AC093423.1-201ENST00000440817 142 ntBASIC0.59□□□□□ -2.31
PROM1O43490 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.59□□□□□ -2.31
PROM1O43490 SNORA62.5-201ENST00000516634 120 ntBASIC0.59□□□□□ -2.31
PROM1O43490 RNU5B-6P-201ENST00000516765 68 ntBASIC0.59□□□□□ -2.31
PROM1O43490 MIR4773-1-201ENST00000637203 78 ntBASIC0.59□□□□□ -2.31
PROM1O43490 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
PROM1O43490 YWHAEP2-201ENST00000580066 112 ntBASIC0.58□□□□□ -2.32
PROM1O43490 YWHAEP3-201ENST00000582767 121 ntBASIC0.58□□□□□ -2.32
PROM1O43490 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
PROM1O43490 RNU6-824P-201ENST00000363724 104 ntBASIC0.57□□□□□ -2.32
PROM1O43490 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
PROM1O43490 RNU6-1275P-201ENST00000391087 107 ntBASIC0.57□□□□□ -2.32
PROM1O43490 RNU2-59P-201ENST00000410482 191 ntBASIC0.57□□□□□ -2.32
PROM1O43490 RNU6-857P-201ENST00000515893 110 ntBASIC0.57□□□□□ -2.32
PROM1O43490 MIR4484-201ENST00000582855 83 ntBASIC0.57□□□□□ -2.32
PROM1O43490 SNORA70.25-201ENST00000612741 95 ntBASIC0.57□□□□□ -2.32
PROM1O43490 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
PROM1O43490 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
PROM1O43490 RNU6-681P-201ENST00000364012 104 ntBASIC0.56□□□□□ -2.32
PROM1O43490 RNU6-279P-201ENST00000391297 101 ntBASIC0.56□□□□□ -2.32
PROM1O43490 MIR4473-201ENST00000583731 91 ntBASIC0.56□□□□□ -2.32
PROM1O43490 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.56□□□□□ -2.32
PROM1O43490 AC069503.3-201ENST00000618674 145 ntBASIC0.56□□□□□ -2.32
PROM1O43490 RNU6-340P-201ENST00000364005 107 ntBASIC0.55□□□□□ -2.32
PROM1O43490 RNU6-382P-201ENST00000365181 106 ntBASIC0.55□□□□□ -2.32
PROM1O43490 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
PROM1O43490 MIR1197-201ENST00000408818 88 ntBASIC0.55□□□□□ -2.32
PROM1O43490 RNU6-274P-201ENST00000459566 107 ntBASIC0.55□□□□□ -2.32
PROM1O43490 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
PROM1O43490 U6.81-201ENST00000612550 106 ntBASIC0.55□□□□□ -2.32
PROM1O43490 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.55□□□□□ -2.32
PROM1O43490 RNU6-24P-201ENST00000384440 107 ntBASIC0.54□□□□□ -2.32
PROM1O43490 RNU6-807P-201ENST00000516805 107 ntBASIC0.54□□□□□ -2.32
PROM1O43490 RNU6-303P-201ENST00000517091 106 ntBASIC0.54□□□□□ -2.32
PROM1O43490 SNORA2A-201ENST00000383885 135 ntBASIC0.53□□□□□ -2.32
PROM1O43490 RNA5SP285-201ENST00000516619 119 ntBASIC0.53□□□□□ -2.32
PROM1O43490 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.52□□□□□ -2.33
PROM1O43490 SNORD75.2-201ENST00000408784 58 ntBASIC0.52□□□□□ -2.33
PROM1O43490 Y_RNA.606-201ENST00000410579 103 ntBASIC0.52□□□□□ -2.33
PROM1O43490 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
PROM1O43490 RNU6-495P-201ENST00000362995 107 ntBASIC0.51□□□□□ -2.33
PROM1O43490 MIR1265-201ENST00000408444 86 ntBASIC0.51□□□□□ -2.33
PROM1O43490 AL691482.2-201ENST00000457453 84 ntBASIC0.51□□□□□ -2.33
PROM1O43490 RNU7-129P-201ENST00000516128 62 ntBASIC0.51□□□□□ -2.33
PROM1O43490 MIR1297-201ENST00000637311 77 ntBASIC0.51□□□□□ -2.33
PROM1O43490 Y_RNA.244-201ENST00000364484 109 ntBASIC0.5□□□□□ -2.33
PROM1O43490 Y_RNA.407-201ENST00000383986 113 ntBASIC0.5□□□□□ -2.33
PROM1O43490 Y_RNA.532-201ENST00000384590 113 ntBASIC0.5□□□□□ -2.33
PROM1O43490 SNORD42B-201ENST00000458893 67 ntBASIC0.5□□□□□ -2.33
PROM1O43490 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
PROM1O43490 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
PROM1O43490 RNU1-29P-201ENST00000606574 126 ntBASIC0.5□□□□□ -2.33
PROM1O43490 RNU6-154P-201ENST00000384306 106 ntBASIC0.49□□□□□ -2.33
PROM1O43490 MIR760-201ENST00000390220 80 ntBASIC0.49□□□□□ -2.33
PROM1O43490 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
PROM1O43490 RNU6-638P-201ENST00000516582 104 ntBASIC0.49□□□□□ -2.33
PROM1O43490 U7.6-201ENST00000610841 64 ntBASIC0.49□□□□□ -2.33
PROM1O43490 SNORD114-4-201ENST00000363962 75 ntBASIC0.48□□□□□ -2.33
PROM1O43490 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
PROM1O43490 SCARNA18B-201ENST00000458806 135 ntBASIC0.48□□□□□ -2.33
PROM1O43490 RNU7-24P-201ENST00000458867 62 ntBASIC0.48□□□□□ -2.33
PROM1O43490 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
PROM1O43490 AL627230.5-201ENST00000619807 58 ntBASIC0.48□□□□□ -2.33
PROM1O43490 MIR6755-201ENST00000619993 66 ntBASIC0.48□□□□□ -2.33
PROM1O43490 SNORD44.1-201ENST00000363202 61 ntBASIC0.47□□□□□ -2.33
PROM1O43490 SNORA8.1-201ENST00000384250 140 ntBASIC0.47□□□□□ -2.33
PROM1O43490 MIR203A-201ENST00000384836 110 ntBASIC0.47□□□□□ -2.33
PROM1O43490 HMGN2P22-201ENST00000427588 175 ntBASIC0.47□□□□□ -2.33
PROM1O43490 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms