Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.57□□□□□ -2.16
HOXA2O43364 AC092634.7-201ENST00000621022 103 ntBASIC1.57□□□□□ -2.16
HOXA2O43364 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXA2O43364 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
HOXA2O43364 RNU1-124P-201ENST00000363861 145 ntBASIC1.55□□□□□ -2.16
HOXA2O43364 Y_RNA.355-201ENST00000365462 98 ntBASIC1.55□□□□□ -2.16
HOXA2O43364 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
HOXA2O43364 RNA5SP299-201ENST00000391203 116 ntBASIC1.55□□□□□ -2.16
HOXA2O43364 RNA5SP404-201ENST00000517118 132 ntBASIC1.55□□□□□ -2.16
HOXA2O43364 AC011195.1-201ENST00000578177 177 ntBASIC1.55□□□□□ -2.16
HOXA2O43364 MIR18A-201ENST00000362310 71 ntBASIC1.54□□□□□ -2.16
HOXA2O43364 SNORA25.5-201ENST00000363782 126 ntBASIC1.54□□□□□ -2.16
HOXA2O43364 RNU6-302P-201ENST00000365249 107 ntBASIC1.54□□□□□ -2.16
HOXA2O43364 SNORD99-201ENST00000408612 74 ntBASIC1.54□□□□□ -2.16
HOXA2O43364 SCARNA21.1-201ENST00000515996 128 ntBASIC1.54□□□□□ -2.16
HOXA2O43364 RNU6-1089P-201ENST00000516473 104 ntBASIC1.53□□□□□ -2.16
HOXA2O43364 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA2O43364 MIR633-201ENST00000384821 98 ntBASIC1.52□□□□□ -2.17
HOXA2O43364 RNA5SP268-201ENST00000516828 124 ntBASIC1.52□□□□□ -2.17
HOXA2O43364 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
HOXA2O43364 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HOXA2O43364 RNU6-940P-201ENST00000363433 104 ntBASIC1.51□□□□□ -2.17
HOXA2O43364 Y_RNA.407-201ENST00000383986 113 ntBASIC1.51□□□□□ -2.17
HOXA2O43364 MIR521-2-201ENST00000384818 87 ntBASIC1.51□□□□□ -2.17
HOXA2O43364 AC006210.1-201ENST00000424882 111 ntBASIC1.51□□□□□ -2.17
HOXA2O43364 snoU13.18-201ENST00000459483 104 ntBASIC1.51□□□□□ -2.17
HOXA2O43364 AC021146.9-201ENST00000512503 156 ntBASIC1.51□□□□□ -2.17
HOXA2O43364 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXA2O43364 AC079150.2-201ENST00000443733 78 ntBASIC1.5□□□□□ -2.17
HOXA2O43364 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
HOXA2O43364 SNORA36.1-201ENST00000363424 132 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 RNA5SP192-201ENST00000364404 120 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 MIR548C-201ENST00000384815 97 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 MIR1276-201ENST00000408707 83 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 AL157398.1-201ENST00000452981 186 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 snoU13.13-201ENST00000458842 104 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 SCARNA17.3-201ENST00000516381 125 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 MIR6504-201ENST00000613520 61 ntBASIC1.48□□□□□ -2.17
HOXA2O43364 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
HOXA2O43364 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HOXA2O43364 SNORD110-201ENST00000408189 75 ntBASIC1.47□□□□□ -2.17
HOXA2O43364 RNA5SP94-201ENST00000516917 108 ntBASIC1.47□□□□□ -2.17
HOXA2O43364 SNORA15B-2-201ENST00000384058 135 ntBASIC1.46□□□□□ -2.18
HOXA2O43364 SNORA15B-1-201ENST00000384334 135 ntBASIC1.46□□□□□ -2.18
HOXA2O43364 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
HOXA2O43364 MIR548V-201ENST00000584165 80 ntBASIC1.46□□□□□ -2.18
HOXA2O43364 SNORA63.6-201ENST00000364921 119 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 RNU6-614P-201ENST00000384369 107 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA2O43364 MIR466-201ENST00000580653 84 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 MIR4473-201ENST00000583731 91 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 MIR7107-201ENST00000611489 80 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 U6.59-201ENST00000615686 107 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 uc_338.10-201ENST00000621872 182 ntBASIC1.45□□□□□ -2.18
HOXA2O43364 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.45□□□□□ -2.18
HOXA2O43364 MIR489-201ENST00000384923 84 ntBASIC1.44□□□□□ -2.18
HOXA2O43364 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
HOXA2O43364 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HOXA2O43364 MIR652-201ENST00000385278 98 ntBASIC1.43□□□□□ -2.18
HOXA2O43364 RNA5SP222-201ENST00000411039 105 ntBASIC1.43□□□□□ -2.18
HOXA2O43364 Y_RNA.224-201ENST00000364308 111 ntBASIC1.42□□□□□ -2.18
HOXA2O43364 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
HOXA2O43364 RNA5SP102-201ENST00000516865 106 ntBASIC1.42□□□□□ -2.18
HOXA2O43364 RNU6-92P-201ENST00000605893 104 ntBASIC1.42□□□□□ -2.18
HOXA2O43364 RNU6-1079P-201ENST00000362861 110 ntBASIC1.41□□□□□ -2.18
HOXA2O43364 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXA2O43364 MIR548AE1-201ENST00000583292 70 ntBASIC1.4□□□□□ -2.19
HOXA2O43364 RNU6-122P-201ENST00000516818 107 ntBASIC1.39□□□□□ -2.19
HOXA2O43364 MIR517B-201ENST00000385102 67 ntBASIC1.38□□□□□ -2.19
HOXA2O43364 RNU6-141P-201ENST00000410499 105 ntBASIC1.38□□□□□ -2.19
HOXA2O43364 Y_RNA.633-201ENST00000459107 95 ntBASIC1.38□□□□□ -2.19
HOXA2O43364 AL353765.1-201ENST00000605514 183 ntBASIC1.38□□□□□ -2.19
HOXA2O43364 SNORA33.1-201ENST00000364957 130 ntBASIC1.37□□□□□ -2.19
HOXA2O43364 SNORD113-2-201ENST00000391082 72 ntBASIC1.37□□□□□ -2.19
HOXA2O43364 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
HOXA2O43364 RNU6-829P-201ENST00000363700 112 ntBASIC1.36□□□□□ -2.19
HOXA2O43364 MIR630-201ENST00000384957 97 ntBASIC1.36□□□□□ -2.19
HOXA2O43364 MIR548E-201ENST00000408287 88 ntBASIC1.36□□□□□ -2.19
HOXA2O43364 Y_RNA.125-201ENST00000363371 111 ntBASIC1.35□□□□□ -2.19
HOXA2O43364 OR2A41P-201ENST00000473586 105 ntBASIC1.35□□□□□ -2.19
HOXA2O43364 SNORA70.25-201ENST00000612741 95 ntBASIC1.35□□□□□ -2.19
HOXA2O43364 U2.7-201ENST00000619197 100 ntBASIC1.35□□□□□ -2.19
HOXA2O43364 RNU6-698P-201ENST00000363523 107 ntBASIC1.34□□□□□ -2.19
HOXA2O43364 RNU6-34P-201ENST00000364874 107 ntBASIC1.34□□□□□ -2.19
HOXA2O43364 MIR4661-201ENST00000582720 75 ntBASIC1.34□□□□□ -2.19
HOXA2O43364 MIR582-201ENST00000365731 98 ntBASIC1.33□□□□□ -2.2
HOXA2O43364 SNORA36.2-201ENST00000384004 127 ntBASIC1.33□□□□□ -2.2
HOXA2O43364 RNU7-174P-201ENST00000516248 59 ntBASIC1.33□□□□□ -2.2
HOXA2O43364 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
HOXA2O43364 RNU6-42P-201ENST00000384165 107 ntBASIC1.32□□□□□ -2.2
HOXA2O43364 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
HOXA2O43364 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
HOXA2O43364 MIR4752-201ENST00000579672 72 ntBASIC1.32□□□□□ -2.2
HOXA2O43364 MIR5706-201ENST00000579841 80 ntBASIC1.32□□□□□ -2.2
HOXA2O43364 SNORD60.1-201ENST00000362451 73 ntBASIC1.31□□□□□ -2.2
HOXA2O43364 MIR3938-201ENST00000582157 103 ntBASIC1.31□□□□□ -2.2
HOXA2O43364 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HOXA2O43364 Y_RNA.236-201ENST00000364427 111 ntBASIC1.3□□□□□ -2.2
HOXA2O43364 SNORD114-22-201ENST00000365423 72 ntBASIC1.3□□□□□ -2.2
HOXA2O43364 SNORA75.1-201ENST00000391130 148 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms