Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 uc_338.19-201ENST00000616808 99 ntBASIC-1.4□□□□□ -2.63
SMKR1H3BMG3 RNU6-694P-201ENST00000364071 147 ntBASIC-1.41□□□□□ -2.64
SMKR1H3BMG3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.41□□□□□ -2.64
SMKR1H3BMG3 AL157777.2-201ENST00000258070 137 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 RNU6-772P-201ENST00000516042 105 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 AL353803.5-201ENST00000599815 141 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 AC006254.2-201ENST00000603259 279 ntBASIC-1.42□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.43□□□□□ -2.64
SMKR1H3BMG3 RNA5SP272-201ENST00000516095 111 ntBASIC-1.43□□□□□ -2.64
SMKR1H3BMG3 MIR548AX-201ENST00000580117 73 ntBASIC-1.43□□□□□ -2.64
SMKR1H3BMG3 MIR4499-201ENST00000584834 69 ntBASIC-1.43□□□□□ -2.64
SMKR1H3BMG3 MIR382-201ENST00000637119 76 ntBASIC-1.43□□□□□ -2.64
SMKR1H3BMG3 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 RNU6-426P-201ENST00000516464 97 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 RNU6-388P-201ENST00000517012 105 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 RNU6-389P-201ENST00000517048 105 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 MIR5009-201ENST00000578736 100 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 AC090617.8-201ENST00000623339 167 ntBASIC-1.44□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 MIR7-2-201ENST00000384970 110 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 MTND4LP9-201ENST00000427694 174 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 SNORA18.5-201ENST00000516616 101 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.45□□□□□ -2.64
SMKR1H3BMG3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.46□□□□□ -2.64
SMKR1H3BMG3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.46□□□□□ -2.64
SMKR1H3BMG3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.46□□□□□ -2.64
SMKR1H3BMG3 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.46□□□□□ -2.64
SMKR1H3BMG3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.46□□□□□ -2.64
SMKR1H3BMG3 MIR4464-201ENST00000580818 92 ntBASIC-1.46□□□□□ -2.64
SMKR1H3BMG3 snoU13.17-201ENST00000458802 104 ntBASIC-1.47□□□□□ -2.64
SMKR1H3BMG3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.47□□□□□ -2.64
SMKR1H3BMG3 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.48□□□□□ -2.65
SMKR1H3BMG3 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.48□□□□□ -2.65
SMKR1H3BMG3 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.48□□□□□ -2.65
SMKR1H3BMG3 SNORD90-201ENST00000391145 111 ntBASIC-1.48□□□□□ -2.65
SMKR1H3BMG3 AL445584.3-201ENST00000617173 78 ntBASIC-1.48□□□□□ -2.65
SMKR1H3BMG3 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 MT-TG-201ENST00000387429 68 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 MIR548I1-201ENST00000408810 149 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 RNA5SP25-201ENST00000410815 110 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 MTND5P41-201ENST00000517498 206 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 MIR4777-201ENST00000583710 86 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 AL353621.2-201ENST00000605340 133 ntBASIC-1.49□□□□□ -2.65
SMKR1H3BMG3 SNORA40-201ENST00000388090 126 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 SCARNA17-201ENST00000516183 144 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 RNU6-182P-201ENST00000516970 105 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 RNY1P9-201ENST00000532431 109 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 MIR6888-201ENST00000621977 67 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 MIR4773-1-201ENST00000637203 78 ntBASIC-1.5□□□□□ -2.65
SMKR1H3BMG3 RNU5F-1-201ENST00000362507 117 ntBASIC-1.51□□□□□ -2.65
SMKR1H3BMG3 SNORA2.1-201ENST00000363089 137 ntBASIC-1.51□□□□□ -2.65
SMKR1H3BMG3 RNA5SP147-201ENST00000516493 109 ntBASIC-1.51□□□□□ -2.65
SMKR1H3BMG3 MIR6509-201ENST00000614603 85 ntBASIC-1.51□□□□□ -2.65
SMKR1H3BMG3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.52□□□□□ -2.65
SMKR1H3BMG3 SNORA33.1-201ENST00000364957 130 ntBASIC-1.52□□□□□ -2.65
SMKR1H3BMG3 MIR1255B2-201ENST00000408618 67 ntBASIC-1.52□□□□□ -2.65
SMKR1H3BMG3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.53□□□□□ -2.65
SMKR1H3BMG3 RNU6-824P-201ENST00000363724 104 ntBASIC-1.53□□□□□ -2.65
SMKR1H3BMG3 MIR203A-201ENST00000384836 110 ntBASIC-1.53□□□□□ -2.65
SMKR1H3BMG3 RNU6-795P-201ENST00000516323 103 ntBASIC-1.53□□□□□ -2.65
SMKR1H3BMG3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.54□□□□□ -2.66
SMKR1H3BMG3 MIR1265-201ENST00000408444 86 ntBASIC-1.54□□□□□ -2.66
SMKR1H3BMG3 CYP3A54P-201ENST00000566950 75 ntBASIC-1.54□□□□□ -2.66
SMKR1H3BMG3 MIR3681-201ENST00000580089 72 ntBASIC-1.54□□□□□ -2.66
SMKR1H3BMG3 MIR3657-201ENST00000584818 117 ntBASIC-1.54□□□□□ -2.66
SMKR1H3BMG3 AC012531.4-201ENST00000616509 177 ntBASIC-1.54□□□□□ -2.66
SMKR1H3BMG3 RNU4-32P-201ENST00000363404 141 ntBASIC-1.55□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.55□□□□□ -2.66
SMKR1H3BMG3 AL691482.2-201ENST00000457453 84 ntBASIC-1.55□□□□□ -2.66
SMKR1H3BMG3 RNU7-107P-201ENST00000459121 61 ntBASIC-1.55□□□□□ -2.66
SMKR1H3BMG3 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.55□□□□□ -2.66
SMKR1H3BMG3 SNORD58A-201ENST00000383875 65 ntBASIC-1.56□□□□□ -2.66
SMKR1H3BMG3 RNU6-886P-201ENST00000384319 105 ntBASIC-1.56□□□□□ -2.66
SMKR1H3BMG3 RNU6-972P-201ENST00000391208 107 ntBASIC-1.56□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.56□□□□□ -2.66
SMKR1H3BMG3 MIR3914-2-201ENST00000637339 95 ntBASIC-1.56□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.57□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.57□□□□□ -2.66
SMKR1H3BMG3 RNU6-257P-201ENST00000410238 98 ntBASIC-1.57□□□□□ -2.66
SMKR1H3BMG3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.57□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.58□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.58□□□□□ -2.66
SMKR1H3BMG3 MIR548A3-201ENST00000385297 97 ntBASIC-1.58□□□□□ -2.66
SMKR1H3BMG3 RNU6-35P-201ENST00000384530 107 ntBASIC-1.59□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms