Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC090617.8-201ENST00000623339 167 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RNF223E7ERA6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RNF223E7ERA6 MIR519A2-201ENST00000384990 87 ntBASIC1.68□□□□□ -2.14
RNF223E7ERA6 SNORD110-201ENST00000408189 75 ntBASIC1.68□□□□□ -2.14
RNF223E7ERA6 AC104435.1-201ENST00000483483 166 ntBASIC1.68□□□□□ -2.14
RNF223E7ERA6 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 MIR1255B2-201ENST00000408618 67 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 RNU6-172P-201ENST00000411000 93 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 RNA5SP182-201ENST00000516064 82 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 RNA5SP227-201ENST00000516184 113 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 AC243829.6-201ENST00000612652 106 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 AC243829.3-201ENST00000622177 108 ntBASIC1.67□□□□□ -2.14
RNF223E7ERA6 SNORD1B-201ENST00000363091 84 ntBASIC1.66□□□□□ -2.14
RNF223E7ERA6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.66□□□□□ -2.14
RNF223E7ERA6 AP000553.5-201ENST00000641933 54 ntBASIC1.66□□□□□ -2.14
RNF223E7ERA6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RNF223E7ERA6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.65□□□□□ -2.15
RNF223E7ERA6 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
RNF223E7ERA6 RNU6-419P-201ENST00000517030 63 ntBASIC1.65□□□□□ -2.15
RNF223E7ERA6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.65□□□□□ -2.15
RNF223E7ERA6 MIR378A-201ENST00000362177 66 ntBASIC1.64□□□□□ -2.15
RNF223E7ERA6 RNU6-247P-201ENST00000362636 107 ntBASIC1.64□□□□□ -2.15
RNF223E7ERA6 SNORA17.3-201ENST00000391159 129 ntBASIC1.64□□□□□ -2.15
RNF223E7ERA6 MIRLET7G-201ENST00000362280 84 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 SNORA25-201ENST00000384384 134 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 MIR1287-201ENST00000408492 90 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 RNA5SP338-201ENST00000410495 85 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 AC003989.2-201ENST00000440224 169 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 MIR4490-201ENST00000582647 84 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 MIR5002-201ENST00000584713 97 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 snoU13.31-201ENST00000607291 104 ntBASIC1.63□□□□□ -2.15
RNF223E7ERA6 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
RNF223E7ERA6 RNA5SP82-201ENST00000516707 92 ntBASIC1.62□□□□□ -2.15
RNF223E7ERA6 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
RNF223E7ERA6 MIR6895-201ENST00000613497 78 ntBASIC1.62□□□□□ -2.15
RNF223E7ERA6 RNU6-717P-201ENST00000459076 104 ntBASIC1.61□□□□□ -2.15
RNF223E7ERA6 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
RNF223E7ERA6 MIR7111-201ENST00000619751 72 ntBASIC1.61□□□□□ -2.15
RNF223E7ERA6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RNF223E7ERA6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
RNF223E7ERA6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RNF223E7ERA6 MIR429-201ENST00000362106 83 ntBASIC1.6□□□□□ -2.15
RNF223E7ERA6 AC244090.1-201ENST00000441884 93 ntBASIC1.6□□□□□ -2.15
RNF223E7ERA6 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
RNF223E7ERA6 Y_RNA.109-201ENST00000363215 102 ntBASIC1.59□□□□□ -2.15
RNF223E7ERA6 SNORA36.1-201ENST00000363424 132 ntBASIC1.59□□□□□ -2.15
RNF223E7ERA6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RNF223E7ERA6 RNU7-154P-201ENST00000516194 62 ntBASIC1.59□□□□□ -2.15
RNF223E7ERA6 RNA5SP268-201ENST00000516828 124 ntBASIC1.59□□□□□ -2.15
RNF223E7ERA6 MIR548AG1-201ENST00000579932 66 ntBASIC1.59□□□□□ -2.15
RNF223E7ERA6 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.15
RNF223E7ERA6 MIR20A-201ENST00000362279 71 ntBASIC1.58□□□□□ -2.16
RNF223E7ERA6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.58□□□□□ -2.16
RNF223E7ERA6 RNA5SP37-201ENST00000365420 130 ntBASIC1.58□□□□□ -2.16
RNF223E7ERA6 AC025627.3-201ENST00000582078 182 ntBASIC1.57□□□□□ -2.16
RNF223E7ERA6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.57□□□□□ -2.16
RNF223E7ERA6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
RNF223E7ERA6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RNF223E7ERA6 RNA5SP160-201ENST00000364866 120 ntBASIC1.56□□□□□ -2.16
RNF223E7ERA6 MIR19B1-201ENST00000384829 87 ntBASIC1.56□□□□□ -2.16
RNF223E7ERA6 MIR144-201ENST00000384886 86 ntBASIC1.56□□□□□ -2.16
RNF223E7ERA6 SNORD2-201ENST00000459163 69 ntBASIC1.56□□□□□ -2.16
RNF223E7ERA6 MIR6840-201ENST00000611937 71 ntBASIC1.56□□□□□ -2.16
RNF223E7ERA6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RNF223E7ERA6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF223E7ERA6 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
RNF223E7ERA6 SNORD115-25-201ENST00000362619 82 ntBASIC1.55□□□□□ -2.16
RNF223E7ERA6 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
RNF223E7ERA6 RNU6-321P-201ENST00000410912 106 ntBASIC1.55□□□□□ -2.16
RNF223E7ERA6 MIR7107-201ENST00000611489 80 ntBASIC1.55□□□□□ -2.16
RNF223E7ERA6 MIR18A-201ENST00000362310 71 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 Y_RNA.118-201ENST00000363300 101 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 RNU6-1250P-201ENST00000391218 107 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 RNU6-337P-201ENST00000391243 106 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 RNU4-62P-201ENST00000410125 130 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 RNA5SP470-201ENST00000516463 106 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 SNORA70.25-201ENST00000612741 95 ntBASIC1.54□□□□□ -2.16
RNF223E7ERA6 RNU6-458P-201ENST00000384179 107 ntBASIC1.53□□□□□ -2.16
RNF223E7ERA6 HMGN2P22-201ENST00000427588 175 ntBASIC1.53□□□□□ -2.16
RNF223E7ERA6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF223E7ERA6 MIR5694-201ENST00000581190 76 ntBASIC1.53□□□□□ -2.16
RNF223E7ERA6 U6.58-201ENST00000613107 107 ntBASIC1.53□□□□□ -2.16
RNF223E7ERA6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
RNF223E7ERA6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
RNF223E7ERA6 RNU6-924P-201ENST00000362926 108 ntBASIC1.52□□□□□ -2.17
RNF223E7ERA6 RNU4-45P-201ENST00000365469 141 ntBASIC1.52□□□□□ -2.17
RNF223E7ERA6 RNU7-160P-201ENST00000516660 62 ntBASIC1.52□□□□□ -2.17
RNF223E7ERA6 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
RNF223E7ERA6 MIR6773-201ENST00000612812 74 ntBASIC1.52□□□□□ -2.17
RNF223E7ERA6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RNF223E7ERA6 AP1B1P2-201ENST00000416196 106 ntBASIC1.51□□□□□ -2.17
RNF223E7ERA6 SNORD124-201ENST00000459577 104 ntBASIC1.51□□□□□ -2.17
RNF223E7ERA6 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
RNF223E7ERA6 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms