Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MIR6739-201ENST00000622461 75 ntBASIC1.19□□□□□ -2.22
U3KQE9 RNA5SP215-201ENST00000363440 122 ntBASIC1.18□□□□□ -2.22
U3KQE9 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
U3KQE9 RN7SL429P-201ENST00000479090 223 ntBASIC1.18□□□□□ -2.22
U3KQE9 RN7SL489P-201ENST00000486185 223 ntBASIC1.18□□□□□ -2.22
U3KQE9 RN7SL327P-201ENST00000488659 223 ntBASIC1.18□□□□□ -2.22
U3KQE9 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
U3KQE9 RN7SL853P-201ENST00000617250 223 ntBASIC1.18□□□□□ -2.22
U3KQE9 MIR203A-201ENST00000384836 110 ntBASIC1.17□□□□□ -2.22
U3KQE9 MIR9-2-201ENST00000384838 87 ntBASIC1.17□□□□□ -2.22
U3KQE9 AC018659.1-201ENST00000551083 169 ntBASIC1.17□□□□□ -2.22
U3KQE9 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
U3KQE9 RNU6-716P-201ENST00000365621 103 ntBASIC1.16□□□□□ -2.22
U3KQE9 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
U3KQE9 MIR320A-201ENST00000385302 82 ntBASIC1.16□□□□□ -2.22
U3KQE9 RNU6-269P-201ENST00000391077 97 ntBASIC1.16□□□□□ -2.22
U3KQE9 MIR1289-2-201ENST00000408360 111 ntBASIC1.16□□□□□ -2.22
U3KQE9 snoU13.26-201ENST00000459452 105 ntBASIC1.16□□□□□ -2.22
U3KQE9 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
U3KQE9 BX248123.2-201ENST00000606318 124 ntBASIC1.16□□□□□ -2.22
U3KQE9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
U3KQE9 RNU6-302P-201ENST00000365249 107 ntBASIC1.15□□□□□ -2.23
U3KQE9 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
U3KQE9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
U3KQE9 RNU6-1162P-201ENST00000384443 104 ntBASIC1.14□□□□□ -2.23
U3KQE9 MIR1304-201ENST00000408243 91 ntBASIC1.14□□□□□ -2.23
U3KQE9 RNA5SP190-201ENST00000365222 118 ntBASIC1.13□□□□□ -2.23
U3KQE9 MIR1323-201ENST00000408090 73 ntBASIC1.13□□□□□ -2.23
U3KQE9 RNA5SP227-201ENST00000516184 113 ntBASIC1.13□□□□□ -2.23
U3KQE9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
U3KQE9 MIR18A-201ENST00000362310 71 ntBASIC1.12□□□□□ -2.23
U3KQE9 SNORA67.5-201ENST00000391036 107 ntBASIC1.12□□□□□ -2.23
U3KQE9 RNA5SP484-201ENST00000458857 111 ntBASIC1.12□□□□□ -2.23
U3KQE9 RNU1-42P-201ENST00000364033 160 ntBASIC1.11□□□□□ -2.23
U3KQE9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
U3KQE9 Y_RNA.407-201ENST00000383986 113 ntBASIC1.11□□□□□ -2.23
U3KQE9 SNORA15B-2-201ENST00000384058 135 ntBASIC1.11□□□□□ -2.23
U3KQE9 SNORA15B-1-201ENST00000384334 135 ntBASIC1.11□□□□□ -2.23
U3KQE9 RNU6-987P-201ENST00000384759 104 ntBASIC1.11□□□□□ -2.23
U3KQE9 MIR521-2-201ENST00000384818 87 ntBASIC1.11□□□□□ -2.23
U3KQE9 MTND4LP19-201ENST00000403051 166 ntBASIC1.11□□□□□ -2.23
U3KQE9 RNU6-656P-201ENST00000516785 107 ntBASIC1.11□□□□□ -2.23
U3KQE9 SNORA31.24-201ENST00000517232 57 ntBASIC1.11□□□□□ -2.23
U3KQE9 SNORA40.17-201ENST00000517256 115 ntBASIC1.11□□□□□ -2.23
U3KQE9 SNORD53B-201ENST00000577887 78 ntBASIC1.11□□□□□ -2.23
U3KQE9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
U3KQE9 RNU6-940P-201ENST00000363433 104 ntBASIC1.1□□□□□ -2.23
U3KQE9 RNU6-990P-201ENST00000364385 104 ntBASIC1.1□□□□□ -2.23
U3KQE9 SNORA67.6-201ENST00000391093 99 ntBASIC1.1□□□□□ -2.23
U3KQE9 MIR1261-201ENST00000408659 82 ntBASIC1.1□□□□□ -2.23
U3KQE9 SNORD13-201ENST00000459299 104 ntBASIC1.1□□□□□ -2.23
U3KQE9 AC108210.2-201ENST00000503681 201 ntBASIC1.1□□□□□ -2.23
U3KQE9 SCARNA21.1-201ENST00000515996 128 ntBASIC1.1□□□□□ -2.23
U3KQE9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.1□□□□□ -2.23
U3KQE9 AL109933.3-201ENST00000619095 188 ntBASIC1.1□□□□□ -2.23
U3KQE9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
U3KQE9 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
U3KQE9 AL354695.1-201ENST00000427935 228 ntBASIC1.09□□□□□ -2.23
U3KQE9 RNU6-1089P-201ENST00000516473 104 ntBASIC1.09□□□□□ -2.23
U3KQE9 RNA5SP268-201ENST00000516828 124 ntBASIC1.09□□□□□ -2.23
U3KQE9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
U3KQE9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
U3KQE9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
U3KQE9 SNORA25.5-201ENST00000363782 126 ntBASIC1.08□□□□□ -2.24
U3KQE9 SNORD99-201ENST00000408612 74 ntBASIC1.08□□□□□ -2.24
U3KQE9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.08□□□□□ -2.24
U3KQE9 SCARNA17.3-201ENST00000516381 125 ntBASIC1.08□□□□□ -2.24
U3KQE9 RNU6-548P-201ENST00000517083 115 ntBASIC1.08□□□□□ -2.24
U3KQE9 AC015712.3-201ENST00000559380 164 ntBASIC1.08□□□□□ -2.24
U3KQE9 AC011195.1-201ENST00000578177 177 ntBASIC1.08□□□□□ -2.24
U3KQE9 AC092634.7-201ENST00000621022 103 ntBASIC1.08□□□□□ -2.24
U3KQE9 uc_338.10-201ENST00000621872 182 ntBASIC1.08□□□□□ -2.24
U3KQE9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.07□□□□□ -2.24
U3KQE9 RNU4-37P-201ENST00000410214 84 ntBASIC1.07□□□□□ -2.24
U3KQE9 AC006210.1-201ENST00000424882 111 ntBASIC1.07□□□□□ -2.24
U3KQE9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
U3KQE9 RNA5SP61-201ENST00000516453 100 ntBASIC1.07□□□□□ -2.24
U3KQE9 RNU5B-6P-201ENST00000516765 68 ntBASIC1.07□□□□□ -2.24
U3KQE9 RNA5SP94-201ENST00000516917 108 ntBASIC1.07□□□□□ -2.24
U3KQE9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.07□□□□□ -2.24
U3KQE9 SNORA36.1-201ENST00000363424 132 ntBASIC1.06□□□□□ -2.24
U3KQE9 RNA5SP299-201ENST00000391203 116 ntBASIC1.06□□□□□ -2.24
U3KQE9 RNA5SP147-201ENST00000516493 109 ntBASIC1.06□□□□□ -2.24
U3KQE9 MIR5706-201ENST00000579841 80 ntBASIC1.06□□□□□ -2.24
U3KQE9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.06□□□□□ -2.24
U3KQE9 SNORA63.6-201ENST00000364921 119 ntBASIC1.05□□□□□ -2.24
U3KQE9 AC079150.2-201ENST00000443733 78 ntBASIC1.05□□□□□ -2.24
U3KQE9 AC021146.9-201ENST00000512503 156 ntBASIC1.05□□□□□ -2.24
U3KQE9 MIR7974-201ENST00000615835 79 ntBASIC1.05□□□□□ -2.24
U3KQE9 MIR26B-201ENST00000362251 77 ntBASIC1.04□□□□□ -2.24
U3KQE9 SNORD110-201ENST00000408189 75 ntBASIC1.04□□□□□ -2.24
U3KQE9 Y_RNA.633-201ENST00000459107 95 ntBASIC1.04□□□□□ -2.24
U3KQE9 RNU1-17P-201ENST00000363022 152 ntBASIC1.03□□□□□ -2.24
U3KQE9 MIR4303-201ENST00000581299 66 ntBASIC1.03□□□□□ -2.24
U3KQE9 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
U3KQE9 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
U3KQE9 MIR7107-201ENST00000611489 80 ntBASIC1.03□□□□□ -2.24
U3KQE9 AL591806.2-201ENST00000433122 173 ntBASIC1.02□□□□□ -2.25
U3KQE9 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
U3KQE9 RNU6-92P-201ENST00000605893 104 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms