Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.18□□□□□ -2.06
PCDHGA4Q9Y5G9 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.18□□□□□ -2.06
PCDHGA4Q9Y5G9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGA4Q9Y5G9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PCDHGA4Q9Y5G9 Y_RNA.125-201ENST00000363371 111 ntBASIC2.17□□□□□ -2.06
PCDHGA4Q9Y5G9 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU1-78P-201ENST00000391248 165 ntBASIC2.17□□□□□ -2.06
PCDHGA4Q9Y5G9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.17□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU6-726P-201ENST00000364680 107 ntBASIC2.16□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.16□□□□□ -2.06
PCDHGA4Q9Y5G9 Y_RNA.633-201ENST00000459107 95 ntBASIC2.16□□□□□ -2.06
PCDHGA4Q9Y5G9 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
PCDHGA4Q9Y5G9 MIR3198-2-201ENST00000577868 80 ntBASIC2.16□□□□□ -2.06
PCDHGA4Q9Y5G9 SNORA33.1-201ENST00000364957 130 ntBASIC2.15□□□□□ -2.07
PCDHGA4Q9Y5G9 SNORA64-201ENST00000384674 134 ntBASIC2.15□□□□□ -2.07
PCDHGA4Q9Y5G9 MIR4781-201ENST00000585250 76 ntBASIC2.15□□□□□ -2.07
PCDHGA4Q9Y5G9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGA4Q9Y5G9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGA4Q9Y5G9 Y_RNA.246-201ENST00000364495 108 ntBASIC2.14□□□□□ -2.07
PCDHGA4Q9Y5G9 MIR758-201ENST00000390227 88 ntBASIC2.14□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
PCDHGA4Q9Y5G9 SNORA8.2-201ENST00000384372 139 ntBASIC2.13□□□□□ -2.07
PCDHGA4Q9Y5G9 SNORA41B-201ENST00000384785 128 ntBASIC2.13□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU6-231P-201ENST00000517122 103 ntBASIC2.13□□□□□ -2.07
PCDHGA4Q9Y5G9 MIR4422-201ENST00000581938 83 ntBASIC2.13□□□□□ -2.07
PCDHGA4Q9Y5G9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDHGA4Q9Y5G9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.12□□□□□ -2.07
PCDHGA4Q9Y5G9 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU6-716P-201ENST00000365621 103 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU6-35P-201ENST00000384530 107 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU6-269P-201ENST00000391077 97 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 RNA5SP247-201ENST00000411181 105 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 RNA5SP47-201ENST00000517230 109 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
PCDHGA4Q9Y5G9 SNORA63.6-201ENST00000364921 119 ntBASIC2.1□□□□□ -2.07
PCDHGA4Q9Y5G9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHGA4Q9Y5G9 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
PCDHGA4Q9Y5G9 SNORD18A-201ENST00000363753 72 ntBASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU4-33P-201ENST00000364316 85 ntBASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 Y_RNA.325-201ENST00000365171 122 ntBASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 RNU6-930P-201ENST00000390938 100 ntBASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 RNA5SP484-201ENST00000458857 111 ntBASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 SNORA70.22-201ENST00000517160 124 ntBASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.09□□□□□ -2.07
PCDHGA4Q9Y5G9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
PCDHGA4Q9Y5G9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
PCDHGA4Q9Y5G9 SNORD12-201ENST00000391002 90 ntBASIC2.08□□□□□ -2.08
PCDHGA4Q9Y5G9 SNORA48.3-201ENST00000391081 134 ntBASIC2.08□□□□□ -2.08
PCDHGA4Q9Y5G9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHGA4Q9Y5G9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
PCDHGA4Q9Y5G9 MIR517C-201ENST00000385103 95 ntBASIC2.07□□□□□ -2.08
PCDHGA4Q9Y5G9 SCARNA17.3-201ENST00000516381 125 ntBASIC2.07□□□□□ -2.08
PCDHGA4Q9Y5G9 RNU6-295P-201ENST00000516901 104 ntBASIC2.07□□□□□ -2.08
PCDHGA4Q9Y5G9 SNORA25.8-201ENST00000364831 128 ntBASIC2.06□□□□□ -2.08
PCDHGA4Q9Y5G9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
PCDHGA4Q9Y5G9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 SNORA9.1-201ENST00000362412 131 ntBASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 Y_RNA.407-201ENST00000383986 113 ntBASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 SNORD116.2-201ENST00000391251 93 ntBASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
PCDHGA4Q9Y5G9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHGA4Q9Y5G9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHGA4Q9Y5G9 AC008834.1-201ENST00000511612 175 ntBASIC2.04□□□□□ -2.08
PCDHGA4Q9Y5G9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.03□□□□□ -2.08
PCDHGA4Q9Y5G9 MIR652-201ENST00000385278 98 ntBASIC2.03□□□□□ -2.08
PCDHGA4Q9Y5G9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PCDHGA4Q9Y5G9 SCARNA16.5-201ENST00000517114 183 ntBASIC2.03□□□□□ -2.08
PCDHGA4Q9Y5G9 RNU6-1110P-201ENST00000516462 101 ntBASIC2.02□□□□□ -2.09
PCDHGA4Q9Y5G9 RNU1-92P-201ENST00000517017 135 ntBASIC2.02□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR3678-201ENST00000578455 94 ntBASIC2.02□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
PCDHGA4Q9Y5G9 SNORD116-16-201ENST00000384533 92 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 SNORD105-201ENST00000386910 85 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 RNU6-1246P-201ENST00000391064 107 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR3122-201ENST00000577243 73 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR7110-201ENST00000612638 86 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR6845-201ENST00000613182 61 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 AL162376.1-201ENST00000624117 175 ntBASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHGA4Q9Y5G9 SNORD89-201ENST00000390981 114 ntBASIC2□□□□□ -2.09
PCDHGA4Q9Y5G9 AC002429.1-201ENST00000437672 148 ntBASIC2□□□□□ -2.09
PCDHGA4Q9Y5G9 AL021921.1-201ENST00000442774 93 ntBASIC2□□□□□ -2.09
PCDHGA4Q9Y5G9 SNORA40.16-201ENST00000517238 121 ntBASIC2□□□□□ -2.09
PCDHGA4Q9Y5G9 CYP3A54P-201ENST00000566950 75 ntBASIC2□□□□□ -2.09
PCDHGA4Q9Y5G9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PCDHGA4Q9Y5G9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHGA4Q9Y5G9 RNU1-17P-201ENST00000363022 152 ntBASIC1.99□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR222-201ENST00000384992 110 ntBASIC1.99□□□□□ -2.09
PCDHGA4Q9Y5G9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.99□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR548X-201ENST00000580069 75 ntBASIC1.99□□□□□ -2.09
PCDHGA4Q9Y5G9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCDHGA4Q9Y5G9 Y_RNA.74-201ENST00000362911 99 ntBASIC1.98□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR582-201ENST00000365731 98 ntBASIC1.98□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR583-201ENST00000384846 75 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms