Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 RNU6-65P-201ENST00000516332 98 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 MIR3613-201ENST00000579844 87 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 MIR4536-1-201ENST00000583537 88 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 MIR3914-2-201ENST00000637339 95 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 RNU6-80P-201ENST00000384195 107 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 U3.27-201ENST00000391237 200 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 AL513043.2-201ENST00000573941 143 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 MIR5009-201ENST00000578736 100 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 MIR3681-201ENST00000580089 72 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 MIR4439-201ENST00000583746 80 ntBASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
FOXA2Q9Y261 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.45□□□□□ -2.48
FOXA2Q9Y261 MIR548A1-201ENST00000385041 97 ntBASIC-0.45□□□□□ -2.48
FOXA2Q9Y261 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.45□□□□□ -2.48
FOXA2Q9Y261 SNORD45B-201ENST00000364617 72 ntBASIC-0.46□□□□□ -2.48
FOXA2Q9Y261 RNU6-54P-201ENST00000365563 107 ntBASIC-0.46□□□□□ -2.48
FOXA2Q9Y261 MIR9-2-201ENST00000384838 87 ntBASIC-0.46□□□□□ -2.48
FOXA2Q9Y261 RNU6-907P-201ENST00000390924 102 ntBASIC-0.46□□□□□ -2.48
FOXA2Q9Y261 AP000676.1-201ENST00000533307 52 ntBASIC-0.46□□□□□ -2.48
FOXA2Q9Y261 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 MIR548A3-201ENST00000385297 97 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 RNU7-85P-201ENST00000458851 63 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 SNORD33.1-201ENST00000516213 88 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 RNU6-762P-201ENST00000517107 102 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 U6.95-201ENST00000636931 70 ntBASIC-0.47□□□□□ -2.48
FOXA2Q9Y261 SNORD114-4-201ENST00000363962 75 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 RNU6-900P-201ENST00000384498 102 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 RNU6-813P-201ENST00000384691 107 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 RNU6-659P-201ENST00000516454 104 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 RNU6-719P-201ENST00000516671 104 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 AP001180.6-201ENST00000584918 159 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 AC103810.7-201ENST00000607821 91 ntBASIC-0.48□□□□□ -2.49
FOXA2Q9Y261 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 SNORA49-201ENST00000386157 136 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 RNU6-644P-201ENST00000391155 98 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 SNORD2-201ENST00000459163 69 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 FGF7P7-201ENST00000514120 227 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 MIR5589-201ENST00000579442 60 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 MIR4802-201ENST00000581881 80 ntBASIC-0.49□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.5□□□□□ -2.49
FOXA2Q9Y261 SNORD115-25-201ENST00000362619 82 ntBASIC-0.5□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.5□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.5□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.5□□□□□ -2.49
FOXA2Q9Y261 AC145423.2-201ENST00000610631 239 ntBASIC-0.5□□□□□ -2.49
FOXA2Q9Y261 RNU4-36P-201ENST00000364294 144 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 MIR582-201ENST00000365731 98 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 RNU6-132P-201ENST00000383863 107 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 SNORA3B-201ENST00000391305 131 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 MIR548E-201ENST00000408287 88 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 SNORD42B-201ENST00000458893 67 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 AC093726.3-201ENST00000637588 150 ntBASIC-0.51□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.52□□□□□ -2.49
FOXA2Q9Y261 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.52□□□□□ -2.49
FOXA2Q9Y261 RNU6-901P-201ENST00000384593 106 ntBASIC-0.52□□□□□ -2.49
FOXA2Q9Y261 MIR548U-201ENST00000390728 81 ntBASIC-0.52□□□□□ -2.49
FOXA2Q9Y261 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
FOXA2Q9Y261 SNORD114-14-201ENST00000362723 75 ntBASIC-0.53□□□□□ -2.49
FOXA2Q9Y261 SNORD4B-201ENST00000459083 72 ntBASIC-0.53□□□□□ -2.49
FOXA2Q9Y261 RNU7-55P-201ENST00000459426 62 ntBASIC-0.53□□□□□ -2.49
FOXA2Q9Y261 MIR3064-201ENST00000581130 66 ntBASIC-0.53□□□□□ -2.49
FOXA2Q9Y261 MIR4777-201ENST00000583710 86 ntBASIC-0.53□□□□□ -2.49
FOXA2Q9Y261 MIR101-1-201ENST00000362265 75 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 SNORA63.2-201ENST00000362603 126 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 SNORD56B-201ENST00000384713 71 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 AL445193.1-201ENST00000441183 141 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 AL500527.2-201ENST00000454105 95 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 RNU6-795P-201ENST00000516323 103 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 SNORA40.17-201ENST00000517256 115 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 MIR4636-201ENST00000582271 80 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 MIR548Z-201ENST00000584743 97 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 AC104996.3-201ENST00000590718 94 ntBASIC-0.54□□□□□ -2.5
FOXA2Q9Y261 SNORD116-14-201ENST00000383894 92 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 SNORD116-17-201ENST00000383929 92 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 RNU6-209P-201ENST00000384118 107 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 SNORD116-15-201ENST00000384445 92 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 RNU6-880P-201ENST00000384526 107 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 SNORD116-19-201ENST00000384729 92 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 RNU6-519P-201ENST00000410590 108 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 snoU13.13-201ENST00000458842 104 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 RNU6-412P-201ENST00000516434 106 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 MIR3140-201ENST00000583685 90 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 MIR4493-201ENST00000584016 73 ntBASIC-0.55□□□□□ -2.5
FOXA2Q9Y261 AC012531.4-201ENST00000616509 177 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms