Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AP001318.4-201ENST00000616637 121 ntBASIC0.19□□□□□ -2.38
DDX56Q9NY93 AC069503.3-201ENST00000618674 145 ntBASIC0.19□□□□□ -2.38
DDX56Q9NY93 MIR924-201ENST00000638017 53 ntBASIC0.19□□□□□ -2.38
DDX56Q9NY93 Y_RNA.125-201ENST00000363371 111 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 RNU5B-6P-201ENST00000516765 68 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 RNU6-158P-201ENST00000517104 100 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 AC026421.1-201ENST00000519101 163 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 MIR4677-201ENST00000584153 80 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 MIR2052-201ENST00000636055 55 ntBASIC0.18□□□□□ -2.38
DDX56Q9NY93 MIR451A-201ENST00000385059 72 ntBASIC0.17□□□□□ -2.38
DDX56Q9NY93 MT-TY-201ENST00000387409 66 ntBASIC0.17□□□□□ -2.38
DDX56Q9NY93 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
DDX56Q9NY93 MIR4473-201ENST00000583731 91 ntBASIC0.17□□□□□ -2.38
DDX56Q9NY93 MIR330-201ENST00000362196 94 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
DDX56Q9NY93 Y_RNA.609-201ENST00000410669 89 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 SNORA40.13-201ENST00000516379 120 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 MIR3064-201ENST00000581130 66 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 AC104408.1-201ENST00000605241 170 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.16□□□□□ -2.38
DDX56Q9NY93 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.16□□□□□ -2.38
DDX56Q9NY93 Y_RNA.205-201ENST00000364128 113 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 Y_RNA.290-201ENST00000364879 114 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-652P-201ENST00000365488 107 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-32P-201ENST00000383948 107 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-13P-201ENST00000384248 107 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 Y_RNA.495-201ENST00000384435 112 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-12P-201ENST00000384604 107 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-41P-201ENST00000384741 107 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 MIR7-2-201ENST00000384970 110 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 MIR548U-201ENST00000390728 81 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-1052P-201ENST00000411398 104 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-719P-201ENST00000516671 104 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 RNU6-782P-201ENST00000516852 104 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
DDX56Q9NY93 Y_RNA.660-201ENST00000516002 120 ntBASIC0.14□□□□□ -2.39
DDX56Q9NY93 SNORA25.13-201ENST00000516395 103 ntBASIC0.14□□□□□ -2.39
DDX56Q9NY93 MIR3925-201ENST00000584674 77 ntBASIC0.14□□□□□ -2.39
DDX56Q9NY93 AC104996.3-201ENST00000590718 94 ntBASIC0.14□□□□□ -2.39
DDX56Q9NY93 MIR8087-201ENST00000612745 78 ntBASIC0.14□□□□□ -2.39
DDX56Q9NY93 MIR6779-201ENST00000617283 64 ntBASIC0.14□□□□□ -2.39
DDX56Q9NY93 RNA5SP325-201ENST00000363756 130 ntBASIC0.13□□□□□ -2.39
DDX56Q9NY93 RNU6-811P-201ENST00000384069 107 ntBASIC0.13□□□□□ -2.39
DDX56Q9NY93 MIR892B-201ENST00000401279 77 ntBASIC0.13□□□□□ -2.39
DDX56Q9NY93 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
DDX56Q9NY93 RNU4-32P-201ENST00000363404 141 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 Y_RNA.348-201ENST00000365403 103 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 MIR216B-201ENST00000390186 82 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 RNA5SP292-201ENST00000390974 118 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 FGF7P7-201ENST00000514120 227 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 Y_RNA.677-201ENST00000516401 85 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 uc_338.10-201ENST00000621872 182 ntBASIC0.12□□□□□ -2.39
DDX56Q9NY93 Y_RNA.491-201ENST00000384417 107 ntBASIC0.11□□□□□ -2.39
DDX56Q9NY93 MIR516B1-201ENST00000385211 90 ntBASIC0.11□□□□□ -2.39
DDX56Q9NY93 U3.27-201ENST00000391237 200 ntBASIC0.11□□□□□ -2.39
DDX56Q9NY93 MIR548O2-201ENST00000616090 70 ntBASIC0.11□□□□□ -2.39
DDX56Q9NY93 AC084368.1-201ENST00000620935 65 ntBASIC0.11□□□□□ -2.39
DDX56Q9NY93 RNU6V-201ENST00000384105 107 ntBASIC0.1□□□□□ -2.39
DDX56Q9NY93 MIR593-201ENST00000384856 100 ntBASIC0.1□□□□□ -2.39
DDX56Q9NY93 SNORA18.5-201ENST00000516616 101 ntBASIC0.1□□□□□ -2.39
DDX56Q9NY93 MIR548H2-201ENST00000408874 88 ntBASIC0.09□□□□□ -2.4
DDX56Q9NY93 SCARNA11.2-201ENST00000517183 154 ntBASIC0.09□□□□□ -2.4
DDX56Q9NY93 MIR548AE1-201ENST00000583292 70 ntBASIC0.09□□□□□ -2.4
DDX56Q9NY93 MIR3140-201ENST00000583685 90 ntBASIC0.09□□□□□ -2.4
DDX56Q9NY93 MIR4743-201ENST00000584576 69 ntBASIC0.09□□□□□ -2.4
DDX56Q9NY93 RNA5SP330-201ENST00000517096 96 ntBASIC0.08□□□□□ -2.4
DDX56Q9NY93 Y_RNA.258-201ENST00000364613 105 ntBASIC0.07□□□□□ -2.4
DDX56Q9NY93 Y_RNA.407-201ENST00000383986 113 ntBASIC0.07□□□□□ -2.4
DDX56Q9NY93 RNU6-905P-201ENST00000384434 107 ntBASIC0.07□□□□□ -2.4
DDX56Q9NY93 RNA5SP63-201ENST00000391225 112 ntBASIC0.07□□□□□ -2.4
DDX56Q9NY93 MALAT1.1-201ENST00000618249 95 ntBASIC0.07□□□□□ -2.4
DDX56Q9NY93 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
DDX56Q9NY93 RNU6-640P-201ENST00000363693 105 ntBASIC0.06□□□□□ -2.4
DDX56Q9NY93 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
DDX56Q9NY93 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
DDX56Q9NY93 SNORA63.2-201ENST00000362603 126 ntBASIC0.05□□□□□ -2.4
DDX56Q9NY93 RNU6-161P-201ENST00000363051 106 ntBASIC0.05□□□□□ -2.4
DDX56Q9NY93 RNU6-1051P-201ENST00000365471 102 ntBASIC0.05□□□□□ -2.4
DDX56Q9NY93 SNORD90-201ENST00000391145 111 ntBASIC0.05□□□□□ -2.4
DDX56Q9NY93 MIR1197-201ENST00000408818 88 ntBASIC0.05□□□□□ -2.4
DDX56Q9NY93 Y_RNA.115-201ENST00000363272 98 ntBASIC0.04□□□□□ -2.4
DDX56Q9NY93 RNA5SP457-201ENST00000363657 124 ntBASIC0.04□□□□□ -2.4
DDX56Q9NY93 RNU6-54P-201ENST00000365563 107 ntBASIC0.04□□□□□ -2.4
DDX56Q9NY93 Y_RNA.437-201ENST00000384113 113 ntBASIC0.04□□□□□ -2.4
DDX56Q9NY93 RNU6-168P-201ENST00000516189 101 ntBASIC0.04□□□□□ -2.4
DDX56Q9NY93 RNU6-153P-201ENST00000364422 104 ntBASIC0.03□□□□□ -2.4
DDX56Q9NY93 MIR488-201ENST00000365739 83 ntBASIC0.03□□□□□ -2.4
DDX56Q9NY93 RNU6-154P-201ENST00000384306 106 ntBASIC0.03□□□□□ -2.4
DDX56Q9NY93 SNORA75.1-201ENST00000391130 148 ntBASIC0.03□□□□□ -2.4
DDX56Q9NY93 MIR876-201ENST00000401147 81 ntBASIC0.03□□□□□ -2.4
DDX56Q9NY93 RNA5SP89-201ENST00000410300 108 ntBASIC0.03□□□□□ -2.4
DDX56Q9NY93 RNA5SP163-201ENST00000410304 99 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms