Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 MIR1255A-201ENST00000408338 113 ntBASIC0.96□□□□□ -2.26
CLDND1Q9NY35 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.96□□□□□ -2.26
CLDND1Q9NY35 MIR6828-201ENST00000636181 60 ntBASIC0.96□□□□□ -2.26
CLDND1Q9NY35 MIR924-201ENST00000638017 53 ntBASIC0.96□□□□□ -2.26
CLDND1Q9NY35 SNORA63.2-201ENST00000362603 126 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 RNU6-726P-201ENST00000364680 107 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 RNU6-1275P-201ENST00000391087 107 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 Y_RNA.681-201ENST00000516445 113 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 Y_RNA.685-201ENST00000516532 108 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 RNU6-1057P-201ENST00000517162 102 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.95□□□□□ -2.26
CLDND1Q9NY35 SNORA36.1-201ENST00000363424 132 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 SNORD114-23-201ENST00000363536 72 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 MIR617-201ENST00000385030 97 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 AL450471.1-201ENST00000447509 127 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 FGF7P7-201ENST00000514120 227 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 RNA5SP94-201ENST00000516917 108 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 MIR6513-201ENST00000621188 64 ntBASIC0.94□□□□□ -2.26
CLDND1Q9NY35 RNU6-716P-201ENST00000365621 103 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 RNU6-129P-201ENST00000391022 107 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 MIR548L-201ENST00000408303 86 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 RNU6-557P-201ENST00000516842 110 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 MIR3140-201ENST00000583685 90 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 AC010487.4-201ENST00000637027 61 ntBASIC0.93□□□□□ -2.26
CLDND1Q9NY35 RNU6-478P-201ENST00000363904 110 ntBASIC0.92□□□□□ -2.26
CLDND1Q9NY35 RNY4P3-201ENST00000365254 95 ntBASIC0.92□□□□□ -2.26
CLDND1Q9NY35 MIR519E-201ENST00000385075 84 ntBASIC0.92□□□□□ -2.26
CLDND1Q9NY35 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDND1Q9NY35 RNA5SP395-201ENST00000516567 118 ntBASIC0.92□□□□□ -2.26
CLDND1Q9NY35 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDND1Q9NY35 RNY1P8-201ENST00000383970 114 ntBASIC0.91□□□□□ -2.26
CLDND1Q9NY35 U3.27-201ENST00000391237 200 ntBASIC0.91□□□□□ -2.26
CLDND1Q9NY35 RNA5SP330-201ENST00000517096 96 ntBASIC0.91□□□□□ -2.26
CLDND1Q9NY35 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
CLDND1Q9NY35 RNU5F-1-201ENST00000362507 117 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNU6-161P-201ENST00000363051 106 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 Y_RNA.94-201ENST00000363068 106 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 SNORD77.2-201ENST00000391045 68 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 MIR936-201ENST00000401264 98 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNA5SP225-201ENST00000410874 135 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNU6-1052P-201ENST00000411398 104 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 snoU13.17-201ENST00000458802 104 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNU7-74P-201ENST00000459104 62 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 Y_RNA.660-201ENST00000516002 120 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNU6-719P-201ENST00000516671 104 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNA5SP268-201ENST00000516828 124 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 MIR4712-201ENST00000583750 82 ntBASIC0.9□□□□□ -2.27
CLDND1Q9NY35 RNU6-315P-201ENST00000362666 107 ntBASIC0.89□□□□□ -2.27
CLDND1Q9NY35 Y_RNA.433-201ENST00000384089 102 ntBASIC0.89□□□□□ -2.27
CLDND1Q9NY35 SNORA24B-201ENST00000384176 131 ntBASIC0.89□□□□□ -2.27
CLDND1Q9NY35 RNA5SP227-201ENST00000516184 113 ntBASIC0.89□□□□□ -2.27
CLDND1Q9NY35 RNU6-1108P-201ENST00000516308 104 ntBASIC0.89□□□□□ -2.27
CLDND1Q9NY35 AL109933.3-201ENST00000619095 188 ntBASIC0.89□□□□□ -2.27
CLDND1Q9NY35 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CLDND1Q9NY35 RNU6-208P-201ENST00000362431 107 ntBASIC0.88□□□□□ -2.27
CLDND1Q9NY35 MIR140-201ENST00000385282 100 ntBASIC0.88□□□□□ -2.27
CLDND1Q9NY35 RNU6-279P-201ENST00000391297 101 ntBASIC0.88□□□□□ -2.27
CLDND1Q9NY35 RNA5SP257-201ENST00000363023 116 ntBASIC0.87□□□□□ -2.27
CLDND1Q9NY35 RNU6-686P-201ENST00000364839 107 ntBASIC0.87□□□□□ -2.27
CLDND1Q9NY35 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
CLDND1Q9NY35 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
CLDND1Q9NY35 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
CLDND1Q9NY35 AL162376.1-201ENST00000624117 175 ntBASIC0.87□□□□□ -2.27
CLDND1Q9NY35 MIRLET7A1-201ENST00000362295 80 ntBASIC0.86□□□□□ -2.27
CLDND1Q9NY35 Y_RNA.264-201ENST00000364665 102 ntBASIC0.86□□□□□ -2.27
CLDND1Q9NY35 RNU6-269P-201ENST00000391077 97 ntBASIC0.86□□□□□ -2.27
CLDND1Q9NY35 AC093423.1-201ENST00000440817 142 ntBASIC0.86□□□□□ -2.27
CLDND1Q9NY35 MIR7107-201ENST00000611489 80 ntBASIC0.86□□□□□ -2.27
CLDND1Q9NY35 MIR8087-201ENST00000612745 78 ntBASIC0.86□□□□□ -2.27
CLDND1Q9NY35 Y_RNA.258-201ENST00000364613 105 ntBASIC0.85□□□□□ -2.27
CLDND1Q9NY35 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
CLDND1Q9NY35 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
CLDND1Q9NY35 RNU6-857P-201ENST00000515893 110 ntBASIC0.85□□□□□ -2.27
CLDND1Q9NY35 RNA5SP62-201ENST00000363457 110 ntBASIC0.84□□□□□ -2.27
CLDND1Q9NY35 RNA5SP517-201ENST00000364724 117 ntBASIC0.84□□□□□ -2.27
CLDND1Q9NY35 SNORA8.2-201ENST00000384372 139 ntBASIC0.84□□□□□ -2.27
CLDND1Q9NY35 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CLDND1Q9NY35 MIR548O2-201ENST00000616090 70 ntBASIC0.83□□□□□ -2.28
CLDND1Q9NY35 RNU1-141P-201ENST00000364623 158 ntBASIC0.82□□□□□ -2.28
CLDND1Q9NY35 AC097510.1-201ENST00000510945 133 ntBASIC0.82□□□□□ -2.28
CLDND1Q9NY35 AC092634.7-201ENST00000621022 103 ntBASIC0.82□□□□□ -2.28
CLDND1Q9NY35 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CLDND1Q9NY35 RNU6-24P-201ENST00000384440 107 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 RNU6-1177P-201ENST00000391058 104 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 RNU2-59P-201ENST00000410482 191 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 RNU6-638P-201ENST00000516582 104 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
CLDND1Q9NY35 Y_RNA.12-201ENST00000362393 112 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 RNU6-1094P-201ENST00000362416 104 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 RNA5SP484-201ENST00000458857 111 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 YWHAEP2-201ENST00000580066 112 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 YWHAEP3-201ENST00000582767 121 ntBASIC0.8□□□□□ -2.28
CLDND1Q9NY35 MIR330-201ENST00000362196 94 ntBASIC0.79□□□□□ -2.28
CLDND1Q9NY35 RNU6-824P-201ENST00000363724 104 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms