Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 RNU6-832P-201ENST00000363319 107 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 RNY4P3-201ENST00000365254 95 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 RNU6-719P-201ENST00000516671 104 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 MIR4694-201ENST00000578534 80 ntBASIC-0.53□□□□□ -2.49
KLHL28Q9NXS3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 SNORD50.2-201ENST00000365465 70 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 MIR548E-201ENST00000408287 88 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 RNU6-257P-201ENST00000410238 98 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 snoU13.13-201ENST00000458842 104 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 RNU7-85P-201ENST00000458851 63 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 SNORD42B-201ENST00000458893 67 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 RNU7-107P-201ENST00000459121 61 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 RNU7-200P-201ENST00000516105 62 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 AL513043.2-201ENST00000573941 143 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.54□□□□□ -2.5
KLHL28Q9NXS3 AL157777.2-201ENST00000258070 137 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 RNU6-65P-201ENST00000516332 98 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 MIR4536-1-201ENST00000583537 88 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
KLHL28Q9NXS3 RNY3P2-201ENST00000362918 102 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 RNU6-132P-201ENST00000383863 107 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 RNU6-901P-201ENST00000384593 106 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 SNORA40-201ENST00000388090 126 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 FGF7P7-201ENST00000514120 227 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 RNU6-346P-201ENST00000516288 111 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 AC068339.1-201ENST00000526965 141 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 MIR4679-2-201ENST00000578358 77 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.57□□□□□ -2.5
KLHL28Q9NXS3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.57□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.57□□□□□ -2.5
KLHL28Q9NXS3 U3.27-201ENST00000391237 200 ntBASIC-0.57□□□□□ -2.5
KLHL28Q9NXS3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.57□□□□□ -2.5
KLHL28Q9NXS3 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.58□□□□□ -2.5
KLHL28Q9NXS3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.58□□□□□ -2.5
KLHL28Q9NXS3 RNU6-971P-201ENST00000516920 106 ntBASIC-0.58□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.59□□□□□ -2.5
KLHL28Q9NXS3 MIR548A1-201ENST00000385041 97 ntBASIC-0.59□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.59□□□□□ -2.5
KLHL28Q9NXS3 RNU6-255P-201ENST00000516957 105 ntBASIC-0.59□□□□□ -2.5
KLHL28Q9NXS3 MIR3140-201ENST00000583685 90 ntBASIC-0.59□□□□□ -2.5
KLHL28Q9NXS3 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
KLHL28Q9NXS3 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 RNU6-476P-201ENST00000384726 107 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 SNORA3B-201ENST00000391305 131 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 SNORD33.1-201ENST00000516213 88 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 MIR5009-201ENST00000578736 100 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 MIR548Z-201ENST00000584743 97 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 AC103810.7-201ENST00000607821 91 ntBASIC-0.6□□□□□ -2.51
KLHL28Q9NXS3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 SNORD114-4-201ENST00000363962 75 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 snoU13.19-201ENST00000459148 104 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 AC090425.1-201ENST00000610007 140 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 MIR6851-201ENST00000617060 67 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 AL391099.1-201ENST00000624635 187 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 MIR3914-2-201ENST00000637339 95 ntBASIC-0.61□□□□□ -2.51
KLHL28Q9NXS3 SNORD45B-201ENST00000364617 72 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 RNU6-813P-201ENST00000384691 107 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 MIR224-201ENST00000384889 81 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 MIR3064-201ENST00000581130 66 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 MIR4439-201ENST00000583746 80 ntBASIC-0.62□□□□□ -2.51
KLHL28Q9NXS3 SNORA63.2-201ENST00000362603 126 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 RNU6-644P-201ENST00000391155 98 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 SNORD4B-201ENST00000459083 72 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 SNORD2-201ENST00000459163 69 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 RNU6-795P-201ENST00000516323 103 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 MIR4777-201ENST00000583710 86 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 MIR5704-201ENST00000584029 77 ntBASIC-0.63□□□□□ -2.51
KLHL28Q9NXS3 RNU6-973P-201ENST00000364690 107 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms