Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RNU7-188P-201ENST00000517063 64 ntBASIC-0.17□□□□□ -2.44
Q9N2K0 MIR6086-201ENST00000638065 55 ntBASIC-0.17□□□□□ -2.44
Q9N2K0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Q9N2K0 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.18□□□□□ -2.44
Q9N2K0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.18□□□□□ -2.44
Q9N2K0 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 RNU6-813P-201ENST00000384691 107 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 RNU6-644P-201ENST00000391155 98 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.19□□□□□ -2.44
Q9N2K0 RNU6-65P-201ENST00000516332 98 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 AC025521.1-201ENST00000621624 286 ntBASIC-0.19□□□□□ -2.44
Q9N2K0 SNORD114-29-201ENST00000364819 70 ntBASIC-0.2□□□□□ -2.44
Q9N2K0 MIR1265-201ENST00000408444 86 ntBASIC-0.2□□□□□ -2.44
Q9N2K0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.2□□□□□ -2.44
Q9N2K0 MIR3613-201ENST00000579844 87 ntBASIC-0.2□□□□□ -2.44
Q9N2K0 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.21□□□□□ -2.44
Q9N2K0 U3.27-201ENST00000391237 200 ntBASIC-0.21□□□□□ -2.44
Q9N2K0 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.21□□□□□ -2.44
Q9N2K0 AL513043.2-201ENST00000573941 143 ntBASIC-0.21□□□□□ -2.44
Q9N2K0 MIR4536-1-201ENST00000583537 88 ntBASIC-0.21□□□□□ -2.44
Q9N2K0 MIR6507-201ENST00000613630 70 ntBASIC-0.21□□□□□ -2.44
Q9N2K0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.21□□□□□ -2.44
Q9N2K0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.22□□□□□ -2.44
Q9N2K0 AC244250.2-201ENST00000418731 148 ntBASIC-0.22□□□□□ -2.44
Q9N2K0 RNU6-762P-201ENST00000517107 102 ntBASIC-0.22□□□□□ -2.44
Q9N2K0 AP001180.6-201ENST00000584918 159 ntBASIC-0.22□□□□□ -2.44
Q9N2K0 RNU6-834P-201ENST00000362367 110 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 HAR1A.1-201ENST00000459583 118 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 RNU6-75P-201ENST00000515944 104 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 RNU6-62P-201ENST00000516526 102 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 RNU6-175P-201ENST00000516896 107 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 MIR548O2-201ENST00000616090 70 ntBASIC-0.23□□□□□ -2.45
Q9N2K0 SNORD49B-201ENST00000365172 72 ntBASIC-0.24□□□□□ -2.45
Q9N2K0 RNU6-154P-201ENST00000384306 106 ntBASIC-0.24□□□□□ -2.45
Q9N2K0 RNU6-476P-201ENST00000384726 107 ntBASIC-0.24□□□□□ -2.45
Q9N2K0 MIR4493-201ENST00000584016 73 ntBASIC-0.24□□□□□ -2.45
Q9N2K0 AC103810.7-201ENST00000607821 91 ntBASIC-0.24□□□□□ -2.45
Q9N2K0 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 MIR1302-5-201ENST00000408164 150 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 SNORD4A-201ENST00000459174 72 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 AC097510.1-201ENST00000510945 133 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 SCARNA23-201ENST00000516060 130 ntBASIC-0.25□□□□□ -2.45
Q9N2K0 RNA5SP98-201ENST00000363158 137 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 RNA5SP205-201ENST00000364653 136 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 MIR451A-201ENST00000385059 72 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 MIR652-201ENST00000385278 98 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 MIR548U-201ENST00000390728 81 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.26□□□□□ -2.45
Q9N2K0 MIR4645-201ENST00000583158 77 ntBASIC-0.26□□□□□ -2.45
Q9N2K0 MIR655-201ENST00000362159 97 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 MIR20A-201ENST00000362279 71 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 RNU6-972P-201ENST00000391208 107 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 RNU6-904P-201ENST00000516206 101 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 RNU6-719P-201ENST00000516671 104 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 MIR4777-201ENST00000583710 86 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 AL365222.1-201ENST00000614661 98 ntBASIC-0.27□□□□□ -2.45
Q9N2K0 MIR101-1-201ENST00000362265 75 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 RNU6-54P-201ENST00000365563 107 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 RNU6-811P-201ENST00000384069 107 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 AL445193.1-201ENST00000441183 141 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 RNU7-85P-201ENST00000458851 63 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 AP000676.1-201ENST00000533307 52 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
Q9N2K0 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 RNA5SP368-201ENST00000364298 116 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 RNU6-22P-201ENST00000384355 107 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 AC244090.1-201ENST00000441884 93 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 RNU6-758P-201ENST00000516292 89 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 RNU6-795P-201ENST00000516323 103 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 MIR548Z-201ENST00000584743 97 ntBASIC-0.29□□□□□ -2.46
Q9N2K0 SNORD114-4-201ENST00000363962 75 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 MIR582-201ENST00000365731 98 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 Z95118.1-201ENST00000421372 247 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 RNU6-479P-201ENST00000516348 105 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 MIR3666-201ENST00000607845 111 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 AC012531.4-201ENST00000616509 177 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 uc_338.36-201ENST00000622331 158 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 AC132825.6-201ENST00000638861 357 ntBASIC-0.3□□□□□ -2.46
Q9N2K0 MIR604-201ENST00000384880 94 ntBASIC-0.31□□□□□ -2.46
Q9N2K0 SNORA49-201ENST00000386157 136 ntBASIC-0.31□□□□□ -2.46
Q9N2K0 RNU6-519P-201ENST00000410590 108 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms