Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 MIR96-201ENST00000362288 78 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 SNORA80D-201ENST00000384488 135 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 RNU6-977P-201ENST00000516411 103 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 MIR548O2-201ENST00000616090 70 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 RNU6-54P-201ENST00000365563 107 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 MIR203A-201ENST00000384836 110 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 RNU1-119P-201ENST00000391122 165 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 MIR6509-201ENST00000614603 85 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 SNORD114-22-201ENST00000365423 72 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 MIR617-201ENST00000385030 97 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 MIR519E-201ENST00000385075 84 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 MIR100-201ENST00000385259 80 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RNU6-994P-201ENST00000410507 111 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RNU7-104P-201ENST00000459398 79 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 SNORD79.1-201ENST00000516069 84 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 AC073869.9-201ENST00000641610 120 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 SNORA40.17-201ENST00000517256 115 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 RMST_2.1-201ENST00000617263 136 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 Y_RNA.375-201ENST00000365625 101 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 MIR520F-201ENST00000384824 87 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 RNU6-141P-201ENST00000410499 105 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 SNORD42B-201ENST00000458893 67 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 MIR3657-201ENST00000584818 117 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 MIR6078-201ENST00000611069 100 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 RNU6-668P-201ENST00000364180 107 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 MIR216B-201ENST00000390186 82 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 MIR1827-201ENST00000408549 66 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 MTND4LP1-201ENST00000446263 157 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 RNU1-93P-201ENST00000364704 169 ntBASIC1.44□□□□□ -2.18
RC3H2Q9HBD1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.44□□□□□ -2.18
RC3H2Q9HBD1 AC092634.7-201ENST00000621022 103 ntBASIC1.44□□□□□ -2.18
RC3H2Q9HBD1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 MIR1-1-201ENST00000362147 71 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6-829P-201ENST00000363700 112 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6-645P-201ENST00000364649 106 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 AC067940.1-201ENST00000458411 300 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 AL136317.1-201ENST00000612653 226 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6V-201ENST00000384105 107 ntBASIC1.42□□□□□ -2.18
RC3H2Q9HBD1 RNU6-542P-201ENST00000516405 103 ntBASIC1.42□□□□□ -2.18
RC3H2Q9HBD1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RC3H2Q9HBD1 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 RNU6-614P-201ENST00000384369 107 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 MIR644A-201ENST00000385262 94 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 SNORD12-201ENST00000391002 90 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 U6.59-201ENST00000615686 107 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 MIR6767-201ENST00000637302 66 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
RC3H2Q9HBD1 AC067863.3-201ENST00000624172 122 ntBASIC1.4□□□□□ -2.19
RC3H2Q9HBD1 SNORA25.5-201ENST00000363782 126 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNU6-990P-201ENST00000364385 104 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP192-201ENST00000364404 120 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 Y_RNA.236-201ENST00000364427 111 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNU6-260P-201ENST00000384092 107 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 SNORD41.1-201ENST00000391000 69 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 AC002350.1-201ENST00000490759 375 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNU6-1079P-201ENST00000362861 110 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 SNORA2.1-201ENST00000363089 137 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 MIR7-2-201ENST00000384970 110 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 SCARNA21.1-201ENST00000515996 128 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 RNU6-656P-201ENST00000516785 107 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RC3H2Q9HBD1 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
RC3H2Q9HBD1 AC244669.1-204ENST00000621564 178 ntBASIC1.37□□□□□ -2.19
RC3H2Q9HBD1 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 SNORD28-201ENST00000384706 75 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 MT-TY-201ENST00000387409 66 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 AC002429.1-201ENST00000437672 148 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP147-201ENST00000516493 109 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 MIR4639-201ENST00000584938 69 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP299-201ENST00000391203 116 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 MIR466-201ENST00000580653 84 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 MIR6739-201ENST00000622461 75 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 RNU6-446P-201ENST00000362827 106 ntBASIC1.34□□□□□ -2.19
RC3H2Q9HBD1 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU6-726P-201ENST00000364680 107 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU6-42P-201ENST00000384165 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms