Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU2-59P-201ENST00000410482 191 ntBASIC1.16□□□□□ -2.22
RNF38Q9H0F5 Y_RNA.606-201ENST00000410579 103 ntBASIC1.16□□□□□ -2.22
RNF38Q9H0F5 RNU6-871P-201ENST00000516122 100 ntBASIC1.16□□□□□ -2.22
RNF38Q9H0F5 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
RNF38Q9H0F5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RNF38Q9H0F5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RNF38Q9H0F5 RNU1-93P-201ENST00000364704 169 ntBASIC1.15□□□□□ -2.23
RNF38Q9H0F5 RNU6-382P-201ENST00000365181 106 ntBASIC1.15□□□□□ -2.23
RNF38Q9H0F5 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
RNF38Q9H0F5 MIR3612-201ENST00000579753 87 ntBASIC1.15□□□□□ -2.23
RNF38Q9H0F5 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.15□□□□□ -2.23
RNF38Q9H0F5 MIR6767-201ENST00000637302 66 ntBASIC1.15□□□□□ -2.23
RNF38Q9H0F5 RNU6-716P-201ENST00000365621 103 ntBASIC1.14□□□□□ -2.23
RNF38Q9H0F5 SNORD28-201ENST00000384706 75 ntBASIC1.14□□□□□ -2.23
RNF38Q9H0F5 MIR573-201ENST00000384964 99 ntBASIC1.14□□□□□ -2.23
RNF38Q9H0F5 MIR519E-201ENST00000385075 84 ntBASIC1.14□□□□□ -2.23
RNF38Q9H0F5 U3.27-201ENST00000391237 200 ntBASIC1.14□□□□□ -2.23
RNF38Q9H0F5 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
RNF38Q9H0F5 SNORD18A-201ENST00000363753 72 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 MIR617-201ENST00000385030 97 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 RNU6-274P-201ENST00000459566 107 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 RNA5SP255-201ENST00000516370 107 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 MIR3678-201ENST00000578455 94 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 MIR3675-201ENST00000583661 73 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 MIR4639-201ENST00000584938 69 ntBASIC1.13□□□□□ -2.23
RNF38Q9H0F5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RNF38Q9H0F5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.12□□□□□ -2.23
RNF38Q9H0F5 RNU6-634P-201ENST00000459134 106 ntBASIC1.12□□□□□ -2.23
RNF38Q9H0F5 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
RNF38Q9H0F5 SNORD115-31-201ENST00000365318 82 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 RNU6-54P-201ENST00000365563 107 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 RNU6-788P-201ENST00000390967 104 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 snoU13.18-201ENST00000459483 104 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 RNU6-135P-201ENST00000516769 101 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 NAMPTP3-201ENST00000569273 224 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
RNF38Q9H0F5 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
RNF38Q9H0F5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
RNF38Q9H0F5 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
RNF38Q9H0F5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.1□□□□□ -2.23
RNF38Q9H0F5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.09□□□□□ -2.23
RNF38Q9H0F5 SNORD45.1-201ENST00000363181 77 ntBASIC1.09□□□□□ -2.23
RNF38Q9H0F5 SNORD30.1-201ENST00000391309 70 ntBASIC1.09□□□□□ -2.23
RNF38Q9H0F5 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
RNF38Q9H0F5 AC244098.3-201ENST00000424803 96 ntBASIC1.09□□□□□ -2.23
RNF38Q9H0F5 RNA5SP47-201ENST00000517230 109 ntBASIC1.09□□□□□ -2.23
RNF38Q9H0F5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF38Q9H0F5 RNU6V-201ENST00000384105 107 ntBASIC1.08□□□□□ -2.24
RNF38Q9H0F5 SNORD45A-201ENST00000384512 84 ntBASIC1.08□□□□□ -2.24
RNF38Q9H0F5 RNU6-540P-201ENST00000384622 101 ntBASIC1.08□□□□□ -2.24
RNF38Q9H0F5 AL691482.2-201ENST00000457453 84 ntBASIC1.08□□□□□ -2.24
RNF38Q9H0F5 RNU6-649P-201ENST00000384463 107 ntBASIC1.07□□□□□ -2.24
RNF38Q9H0F5 RNU6-604P-201ENST00000390917 100 ntBASIC1.07□□□□□ -2.24
RNF38Q9H0F5 SNORD75.2-201ENST00000408784 58 ntBASIC1.07□□□□□ -2.24
RNF38Q9H0F5 RNU6-539P-201ENST00000516665 103 ntBASIC1.07□□□□□ -2.24
RNF38Q9H0F5 MIR548O2-201ENST00000616090 70 ntBASIC1.07□□□□□ -2.24
RNF38Q9H0F5 RNU6-726P-201ENST00000364680 107 ntBASIC1.06□□□□□ -2.24
RNF38Q9H0F5 MIR203A-201ENST00000384836 110 ntBASIC1.06□□□□□ -2.24
RNF38Q9H0F5 MIR216B-201ENST00000390186 82 ntBASIC1.06□□□□□ -2.24
RNF38Q9H0F5 SNORD41.1-201ENST00000391000 69 ntBASIC1.06□□□□□ -2.24
RNF38Q9H0F5 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
RNF38Q9H0F5 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
RNF38Q9H0F5 RNU7-74P-201ENST00000459104 62 ntBASIC1.05□□□□□ -2.24
RNF38Q9H0F5 MIR4460-201ENST00000577862 86 ntBASIC1.05□□□□□ -2.24
RNF38Q9H0F5 MIR7111-201ENST00000619751 72 ntBASIC1.05□□□□□ -2.24
RNF38Q9H0F5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF38Q9H0F5 MIR18A-201ENST00000362310 71 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 RNU6-495P-201ENST00000362995 107 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 RNU6-895P-201ENST00000384125 103 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 RNU6-663P-201ENST00000391105 106 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.04□□□□□ -2.24
RNF38Q9H0F5 SNORD115-22-201ENST00000364456 82 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 RNU6-269P-201ENST00000391077 97 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 RNA5SP222-201ENST00000411039 105 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 SNORD42B-201ENST00000458893 67 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 RNA5SP220-201ENST00000516298 104 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 RNU6-881P-201ENST00000516813 102 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF38Q9H0F5 MIR6509-201ENST00000614603 85 ntBASIC1.03□□□□□ -2.24
RNF38Q9H0F5 RNU6-590P-201ENST00000365039 107 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RNF38Q9H0F5 RNU6-1039P-201ENST00000383931 107 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 RNA5SP484-201ENST00000458857 111 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 RNA5SP227-201ENST00000516184 113 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 RNU6-752P-201ENST00000516376 102 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
RNF38Q9H0F5 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
RNF38Q9H0F5 RNU6-42P-201ENST00000384165 107 ntBASIC1.01□□□□□ -2.25
RNF38Q9H0F5 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
RNF38Q9H0F5 AC093423.1-201ENST00000440817 142 ntBASIC1.01□□□□□ -2.25
RNF38Q9H0F5 RNU5B-6P-201ENST00000516765 68 ntBASIC1.01□□□□□ -2.25
RNF38Q9H0F5 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
RNF38Q9H0F5 RNU1-141P-201ENST00000364623 158 ntBASIC1□□□□□ -2.25
RNF38Q9H0F5 MT-TY-201ENST00000387409 66 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms