Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP3-3Q9BYR6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-3Q9BYR6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR200A-201ENST00000384875 90 ntBASIC1.57□□□□□ -2.16
KRTAP3-3Q9BYR6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KRTAP3-3Q9BYR6 RNU6-229P-201ENST00000516614 102 ntBASIC1.57□□□□□ -2.16
KRTAP3-3Q9BYR6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.57□□□□□ -2.16
KRTAP3-3Q9BYR6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 SNORA5A-201ENST00000384111 134 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR106A-201ENST00000384870 81 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR17-201ENST00000385012 84 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 AC069271.1-201ENST00000445577 156 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 UQCRHP3-201ENST00000451503 251 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 AC011195.1-201ENST00000578177 177 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR3922-201ENST00000585192 84 ntBASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-3Q9BYR6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP3-3Q9BYR6 SNORA5B-201ENST00000363786 132 ntBASIC1.55□□□□□ -2.16
KRTAP3-3Q9BYR6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP3-3Q9BYR6 AC092185.1-201ENST00000491371 97 ntBASIC1.55□□□□□ -2.16
KRTAP3-3Q9BYR6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP3-3Q9BYR6 RNU6-973P-201ENST00000364690 107 ntBASIC1.54□□□□□ -2.16
KRTAP3-3Q9BYR6 AC068724.3-201ENST00000625906 87 ntBASIC1.54□□□□□ -2.16
KRTAP3-3Q9BYR6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 AL359837.1-201ENST00000381357 287 ntBASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR19B1-201ENST00000384829 87 ntBASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR3160-1-201ENST00000577972 85 ntBASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR4276-201ENST00000584832 70 ntBASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 MIR6748-201ENST00000610433 71 ntBASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 uc_338.36-201ENST00000622331 158 ntBASIC1.53□□□□□ -2.16
KRTAP3-3Q9BYR6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR490-201ENST00000384865 128 ntBASIC1.52□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR501-201ENST00000390204 84 ntBASIC1.52□□□□□ -2.17
KRTAP3-3Q9BYR6 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.52□□□□□ -2.17
KRTAP3-3Q9BYR6 RPS29P6-201ENST00000438196 145 ntBASIC1.52□□□□□ -2.17
KRTAP3-3Q9BYR6 RN7SL385P-201ENST00000468873 276 ntBASIC1.52□□□□□ -2.17
KRTAP3-3Q9BYR6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 Y_RNA.260-201ENST00000364628 101 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-392P-201ENST00000364926 101 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 Y_RNA.320-201ENST00000365144 102 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORA48.3-201ENST00000391081 134 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR876-201ENST00000401147 81 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR6755-201ENST00000619993 66 ntBASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-608P-201ENST00000383927 104 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR218-2-201ENST00000385006 110 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORD99-201ENST00000408612 74 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 HMGN2P19-201ENST00000425149 265 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU7-55P-201ENST00000459426 62 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU4-54P-201ENST00000516428 129 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 AC026403.1-201ENST00000518938 295 ntBASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP3-3Q9BYR6 RNA5SP224-201ENST00000365069 126 ntBASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORA7.4-201ENST00000384249 137 ntBASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 RNA5SP274-201ENST00000410484 108 ntBASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 AC096531.1-201ENST00000419107 107 ntBASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 COTL1P1-201ENST00000422309 375 ntBASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 AC010297.1-201ENST00000623948 149 ntBASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP3-3Q9BYR6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 RNA5SP98-201ENST00000363158 137 ntBASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR518A1-201ENST00000385068 85 ntBASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 RNA5SP233-201ENST00000459153 113 ntBASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-1232P-201ENST00000516299 86 ntBASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-68P-201ENST00000516576 104 ntBASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR3605-201ENST00000583214 100 ntBASIC1.48□□□□□ -2.17
KRTAP3-3Q9BYR6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORA42.1-201ENST00000363515 137 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORD15B-201ENST00000384714 146 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORA57.1-201ENST00000391227 145 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6ATAC-201ENST00000408749 126 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RPS29P4-201ENST00000414733 161 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RNA5SP385-201ENST00000515947 110 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-848P-201ENST00000515948 107 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-617P-201ENST00000516147 107 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-473P-201ENST00000516164 107 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 RNU6-1049P-201ENST00000516414 107 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR4506-201ENST00000584693 77 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR6810-201ENST00000622701 70 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 MIR622-201ENST00000638396 96 ntBASIC1.47□□□□□ -2.17
KRTAP3-3Q9BYR6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
KRTAP3-3Q9BYR6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
KRTAP3-3Q9BYR6 AC008413.1-201ENST00000511864 177 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms