Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 RNA5SP272-201ENST00000516095 111 ntBASIC-0.59□□□□□ -2.5
KLHDC3Q9BQ90 RNA5SP66-201ENST00000517178 101 ntBASIC-0.59□□□□□ -2.5
KLHDC3Q9BQ90 MIR4679-2-201ENST00000578358 77 ntBASIC-0.59□□□□□ -2.5
KLHDC3Q9BQ90 MIR4432-201ENST00000581823 84 ntBASIC-0.59□□□□□ -2.5
KLHDC3Q9BQ90 AL391099.1-201ENST00000624635 187 ntBASIC-0.59□□□□□ -2.5
KLHDC3Q9BQ90 RNU4-32P-201ENST00000363404 141 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 SNORA40-201ENST00000388090 126 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.6□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 MIR451A-201ENST00000385059 72 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 MIR196A1-201ENST00000388006 70 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 U3.27-201ENST00000391237 200 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 SNORD2-201ENST00000459163 69 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 MIR4324-201ENST00000584846 72 ntBASIC-0.61□□□□□ -2.51
KLHDC3Q9BQ90 AL157777.2-201ENST00000258070 137 ntBASIC-0.62□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.62□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.62□□□□□ -2.51
KLHDC3Q9BQ90 MIR9-2-201ENST00000384838 87 ntBASIC-0.62□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-75P-201ENST00000515944 104 ntBASIC-0.62□□□□□ -2.51
KLHDC3Q9BQ90 MIR548AX-201ENST00000580117 73 ntBASIC-0.62□□□□□ -2.51
KLHDC3Q9BQ90 RNY3P2-201ENST00000362918 102 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-832P-201ENST00000363319 107 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-900P-201ENST00000384498 102 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 RNU7-200P-201ENST00000516105 62 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-65P-201ENST00000516332 98 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 AP000676.1-201ENST00000533307 52 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 MIR4439-201ENST00000583746 80 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 MIR6738-201ENST00000619620 64 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 AC025521.1-201ENST00000621624 286 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 AL035470.1-201ENST00000622571 220 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 AC093726.3-201ENST00000637588 150 ntBASIC-0.63□□□□□ -2.51
KLHDC3Q9BQ90 SNORD114-4-201ENST00000363962 75 ntBASIC-0.64□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-10P-201ENST00000384036 107 ntBASIC-0.64□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.64□□□□□ -2.51
KLHDC3Q9BQ90 SNORD50.2-201ENST00000365465 70 ntBASIC-0.65□□□□□ -2.51
KLHDC3Q9BQ90 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.65□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.65□□□□□ -2.51
KLHDC3Q9BQ90 RNU6-86P-201ENST00000606534 107 ntBASIC-0.65□□□□□ -2.51
KLHDC3Q9BQ90 SNORD115-25-201ENST00000362619 82 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-54P-201ENST00000365563 107 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 SNORA49-201ENST00000386157 136 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-257P-201ENST00000410238 98 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 MIR4536-1-201ENST00000583537 88 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 AL627230.5-201ENST00000619807 58 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.66□□□□□ -2.52
KLHDC3Q9BQ90 SNORD114-14-201ENST00000362723 75 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 snosnR66.1-201ENST00000391095 99 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 RNA5SP266-201ENST00000410273 108 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 RNA5SP461-201ENST00000516451 104 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 SNORA40.17-201ENST00000517256 115 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 AC068339.1-201ENST00000526965 141 ntBASIC-0.67□□□□□ -2.52
KLHDC3Q9BQ90 SNORD45B-201ENST00000364617 72 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 RNY1P5-201ENST00000383890 115 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 AL513043.2-201ENST00000573941 143 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 AC145423.2-201ENST00000610631 239 ntBASIC-0.68□□□□□ -2.52
KLHDC3Q9BQ90 RNY1P7-201ENST00000384743 110 ntBASIC-0.69□□□□□ -2.52
KLHDC3Q9BQ90 AL445193.1-201ENST00000441183 141 ntBASIC-0.69□□□□□ -2.52
KLHDC3Q9BQ90 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 MIR409-201ENST00000362237 79 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 MIR587-201ENST00000384845 96 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 MIR548E-201ENST00000408287 88 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 RNU7-85P-201ENST00000458851 63 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 RNU7-55P-201ENST00000459426 62 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-762P-201ENST00000517107 102 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 MIR3914-2-201ENST00000637339 95 ntBASIC-0.7□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 SNORD56B-201ENST00000384713 71 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 MIR548U-201ENST00000390728 81 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-644P-201ENST00000391155 98 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 SNX3P1X-201ENST00000414887 175 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 RNU7-107P-201ENST00000459121 61 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 SCARNA17-201ENST00000516183 144 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 MIR5009-201ENST00000578736 100 ntBASIC-0.71□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 MIR582-201ENST00000365731 98 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 FGF7P7-201ENST00000514120 227 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 RNA5SP470-201ENST00000516463 106 ntBASIC-0.72□□□□□ -2.52
KLHDC3Q9BQ90 MIR3613-201ENST00000579844 87 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms