Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MIR759-201ENST00000390224 91 ntBASIC-2.98□□□□□ -2.89
IFT140Q96RY7 RNU6-651P-201ENST00000411040 105 ntBASIC-2.98□□□□□ -2.89
IFT140Q96RY7 MIR548AM-201ENST00000584298 74 ntBASIC-2.98□□□□□ -2.89
IFT140Q96RY7 AL442128.1-201ENST00000615151 90 ntBASIC-2.98□□□□□ -2.89
IFT140Q96RY7 SNORA63.7-201ENST00000365579 123 ntBASIC-2.99□□□□□ -2.89
IFT140Q96RY7 SNORD116-1-201ENST00000384335 95 ntBASIC-2.99□□□□□ -2.89
IFT140Q96RY7 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.99□□□□□ -2.89
IFT140Q96RY7 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.99□□□□□ -2.89
IFT140Q96RY7 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.99□□□□□ -2.89
IFT140Q96RY7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.99□□□□□ -2.89
IFT140Q96RY7 MIR3123-201ENST00000583417 75 ntBASIC-2.99□□□□□ -2.89
IFT140Q96RY7 RNU6-508P-201ENST00000363231 103 ntBASIC-3□□□□□ -2.89
IFT140Q96RY7 SNORD116-2-201ENST00000384274 95 ntBASIC-3□□□□□ -2.89
IFT140Q96RY7 ELOCP20-201ENST00000422460 345 ntBASIC-3□□□□□ -2.89
IFT140Q96RY7 AC104996.3-201ENST00000590718 94 ntBASIC-3□□□□□ -2.89
IFT140Q96RY7 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.01□□□□□ -2.89
IFT140Q96RY7 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 RNU6-309P-201ENST00000364573 106 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 RNU6-409P-201ENST00000384114 104 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 MIR548AG1-201ENST00000579932 66 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.789-201ENST00000622480 102 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 AC078883.4-201ENST00000623218 367 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 U6.106-201ENST00000636360 105 ntBASIC-3.02□□□□□ -2.89
IFT140Q96RY7 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.03□□□□□ -2.89
IFT140Q96RY7 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.03□□□□□ -2.89
IFT140Q96RY7 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.03□□□□□ -2.89
IFT140Q96RY7 MTND1P29-201ENST00000448112 647 ntBASIC-3.03□□□□□ -2.89
IFT140Q96RY7 RNU6-194P-201ENST00000363862 105 ntBASIC-3.03□□□□□ -2.9
IFT140Q96RY7 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.03□□□□□ -2.9
IFT140Q96RY7 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.03□□□□□ -2.9
IFT140Q96RY7 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.03□□□□□ -2.9
IFT140Q96RY7 RNU4-88P-201ENST00000411220 86 ntBASIC-3.03□□□□□ -2.9
IFT140Q96RY7 MTATP6P29-201ENST00000415057 132 ntBASIC-3.03□□□□□ -2.9
IFT140Q96RY7 RNU6-608P-201ENST00000383927 104 ntBASIC-3.04□□□□□ -2.9
IFT140Q96RY7 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.04□□□□□ -2.9
IFT140Q96RY7 MIR1302-11-201ENST00000408051 138 ntBASIC-3.04□□□□□ -2.9
IFT140Q96RY7 MIR1302-9-201ENST00000408365 138 ntBASIC-3.04□□□□□ -2.9
IFT140Q96RY7 MIR1302-10-201ENST00000408734 138 ntBASIC-3.04□□□□□ -2.9
IFT140Q96RY7 MIR1302-2-201ENST00000607096 138 ntBASIC-3.04□□□□□ -2.9
IFT140Q96RY7 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.05□□□□□ -2.9
IFT140Q96RY7 RNU6-768P-201ENST00000384683 107 ntBASIC-3.05□□□□□ -2.9
IFT140Q96RY7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.05□□□□□ -2.9
IFT140Q96RY7 MIR6739-201ENST00000622461 75 ntBASIC-3.05□□□□□ -2.9
IFT140Q96RY7 MTND4LP32-201ENST00000636111 270 ntBASIC-3.05□□□□□ -2.9
IFT140Q96RY7 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.06□□□□□ -2.9
IFT140Q96RY7 RNU6-478P-201ENST00000363904 110 ntBASIC-3.06□□□□□ -2.9
IFT140Q96RY7 RNU6-824P-201ENST00000363724 104 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 MT-TW-201ENST00000387382 68 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 RNU6-630P-201ENST00000391258 106 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 RNU6-62P-201ENST00000516526 102 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 AC120024.2-201ENST00000576526 175 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 AC113139.1-201ENST00000605049 239 ntBASIC-3.07□□□□□ -2.9
IFT140Q96RY7 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.08□□□□□ -2.9
IFT140Q96RY7 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.08□□□□□ -2.9
IFT140Q96RY7 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.08□□□□□ -2.9
IFT140Q96RY7 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.08□□□□□ -2.9
IFT140Q96RY7 SNORA40.15-201ENST00000516884 107 ntBASIC-3.08□□□□□ -2.9
IFT140Q96RY7 AL513043.2-201ENST00000573941 143 ntBASIC-3.08□□□□□ -2.9
IFT140Q96RY7 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 Y_RNA.315-201ENST00000365117 102 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 RNU2-16P-201ENST00000410712 136 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 MIR548Z-201ENST00000584743 97 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 AC002553.4-201ENST00000616896 331 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 SNORD90-201ENST00000391145 111 ntBASIC-3.09□□□□□ -2.9
IFT140Q96RY7 RNA5SP405-201ENST00000363059 114 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 MT-TM-201ENST00000387377 68 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 RNU6-258P-201ENST00000390884 101 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 MTND3P2-201ENST00000438452 342 ntBASIC-3.1□□□□□ -2.91
IFT140Q96RY7 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.11□□□□□ -2.91
IFT140Q96RY7 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.11□□□□□ -2.91
IFT140Q96RY7 SNORA75.5-201ENST00000391291 81 ntBASIC-3.11□□□□□ -2.91
IFT140Q96RY7 MIR4282-201ENST00000583613 67 ntBASIC-3.11□□□□□ -2.91
IFT140Q96RY7 RNU6-238P-201ENST00000363313 106 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 RNU6-770P-201ENST00000363929 105 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 MIR548D2-201ENST00000384955 97 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 RNU6-696P-201ENST00000390834 107 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 MIR3688-2-201ENST00000636963 87 ntBASIC-3.12□□□□□ -2.91
IFT140Q96RY7 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.13□□□□□ -2.91
IFT140Q96RY7 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.13□□□□□ -2.91
IFT140Q96RY7 RNU6-151P-201ENST00000364158 107 ntBASIC-3.13□□□□□ -2.91
IFT140Q96RY7 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.13□□□□□ -2.91
IFT140Q96RY7 SNORD116-29-201ENST00000384516 83 ntBASIC-3.13□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms