Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MIR6515-201ENST00000619843 57 ntBASIC2.14□□□□□ -2.07
LRCH3Q96II8 MIR1-1-201ENST00000362147 71 ntBASIC2.13□□□□□ -2.07
LRCH3Q96II8 RNU6-1162P-201ENST00000384443 104 ntBASIC2.13□□□□□ -2.07
LRCH3Q96II8 RNU7-74P-201ENST00000459104 62 ntBASIC2.13□□□□□ -2.07
LRCH3Q96II8 RNA5SP102-201ENST00000516865 106 ntBASIC2.13□□□□□ -2.07
LRCH3Q96II8 MIR548AD-201ENST00000584780 82 ntBASIC2.13□□□□□ -2.07
LRCH3Q96II8 AC084768.2-201ENST00000622736 221 ntBASIC2.13□□□□□ -2.07
LRCH3Q96II8 Y_RNA.250-201ENST00000364542 110 ntBASIC2.12□□□□□ -2.07
LRCH3Q96II8 MIR521-2-201ENST00000384818 87 ntBASIC2.12□□□□□ -2.07
LRCH3Q96II8 snoU13.13-201ENST00000458842 104 ntBASIC2.12□□□□□ -2.07
LRCH3Q96II8 RNU6-902P-201ENST00000517212 91 ntBASIC2.12□□□□□ -2.07
LRCH3Q96II8 MIR4460-201ENST00000577862 86 ntBASIC2.12□□□□□ -2.07
LRCH3Q96II8 AC022709.1-201ENST00000615967 87 ntBASIC2.12□□□□□ -2.07
LRCH3Q96II8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LRCH3Q96II8 SNORD114-22-201ENST00000365423 72 ntBASIC2.11□□□□□ -2.07
LRCH3Q96II8 SNORA80D-201ENST00000384488 135 ntBASIC2.11□□□□□ -2.07
LRCH3Q96II8 SNORA67.5-201ENST00000391036 107 ntBASIC2.11□□□□□ -2.07
LRCH3Q96II8 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
LRCH3Q96II8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
LRCH3Q96II8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LRCH3Q96II8 MIR644A-201ENST00000385262 94 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 SNORD41.1-201ENST00000391000 69 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 SNORD113-2-201ENST00000391082 72 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 RNU7-90P-201ENST00000459216 62 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
LRCH3Q96II8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LRCH3Q96II8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU6-698P-201ENST00000363523 107 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU6-753P-201ENST00000363926 107 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU6-34P-201ENST00000364874 107 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 MIR517B-201ENST00000385102 67 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU6-910P-201ENST00000390844 107 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU7-174P-201ENST00000516248 59 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.09□□□□□ -2.07
LRCH3Q96II8 U4.4-201ENST00000620626 117 ntBASIC2.09□□□□□ -2.07
LRCH3Q96II8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LRCH3Q96II8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LRCH3Q96II8 SNORA7.1-201ENST00000363750 139 ntBASIC2.08□□□□□ -2.08
LRCH3Q96II8 RNU6-520P-201ENST00000384717 104 ntBASIC2.08□□□□□ -2.08
LRCH3Q96II8 MIR9-3-201ENST00000385084 90 ntBASIC2.08□□□□□ -2.08
LRCH3Q96II8 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
LRCH3Q96II8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.08□□□□□ -2.08
LRCH3Q96II8 U2.7-201ENST00000619197 100 ntBASIC2.08□□□□□ -2.08
LRCH3Q96II8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.08□□□□□ -2.08
LRCH3Q96II8 MIR1827-201ENST00000408549 66 ntBASIC2.07□□□□□ -2.08
LRCH3Q96II8 AC244669.1-204ENST00000621564 178 ntBASIC2.07□□□□□ -2.08
LRCH3Q96II8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LRCH3Q96II8 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
LRCH3Q96II8 SNORD79.1-201ENST00000516069 84 ntBASIC2.06□□□□□ -2.08
LRCH3Q96II8 Y_RNA.30-201ENST00000362572 97 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 SNORD114-4-201ENST00000363962 75 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 AC002350.1-201ENST00000490759 375 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 RNU5B-6P-201ENST00000516765 68 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 MIR4639-201ENST00000584938 69 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 uc_338.10-201ENST00000621872 182 ntBASIC2.05□□□□□ -2.08
LRCH3Q96II8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LRCH3Q96II8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LRCH3Q96II8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LRCH3Q96II8 RNU1-141P-201ENST00000364623 158 ntBASIC2.04□□□□□ -2.08
LRCH3Q96II8 SNORD28-201ENST00000384706 75 ntBASIC2.04□□□□□ -2.08
LRCH3Q96II8 MIR548L-201ENST00000408303 86 ntBASIC2.04□□□□□ -2.08
LRCH3Q96II8 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
LRCH3Q96II8 AC021146.9-201ENST00000512503 156 ntBASIC2.04□□□□□ -2.08
LRCH3Q96II8 RNU6-135P-201ENST00000516769 101 ntBASIC2.04□□□□□ -2.08
LRCH3Q96II8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LRCH3Q96II8 MIR4285-201ENST00000581001 85 ntBASIC2.03□□□□□ -2.08
LRCH3Q96II8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LRCH3Q96II8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LRCH3Q96II8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRCH3Q96II8 RNU6-726P-201ENST00000364680 107 ntBASIC2.01□□□□□ -2.09
LRCH3Q96II8 SNORA33.1-201ENST00000364957 130 ntBASIC2.01□□□□□ -2.09
LRCH3Q96II8 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
LRCH3Q96II8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.01□□□□□ -2.09
LRCH3Q96II8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
LRCH3Q96II8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2□□□□□ -2.09
LRCH3Q96II8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
LRCH3Q96II8 Y_RNA.125-201ENST00000363371 111 ntBASIC1.99□□□□□ -2.09
LRCH3Q96II8 RNU1-78P-201ENST00000391248 165 ntBASIC1.99□□□□□ -2.09
LRCH3Q96II8 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
LRCH3Q96II8 Y_RNA.633-201ENST00000459107 95 ntBASIC1.99□□□□□ -2.09
LRCH3Q96II8 RNU6-469P-201ENST00000516253 101 ntBASIC1.99□□□□□ -2.09
LRCH3Q96II8 RNU6-980P-201ENST00000516925 103 ntBASIC1.99□□□□□ -2.09
LRCH3Q96II8 RNU6-716P-201ENST00000365621 103 ntBASIC1.98□□□□□ -2.09
LRCH3Q96II8 SNORA41B-201ENST00000384785 128 ntBASIC1.98□□□□□ -2.09
LRCH3Q96II8 MIR598-201ENST00000384868 97 ntBASIC1.98□□□□□ -2.09
LRCH3Q96II8 SNORA15B-2-201ENST00000384058 135 ntBASIC1.97□□□□□ -2.09
LRCH3Q96II8 SNORA15B-1-201ENST00000384334 135 ntBASIC1.97□□□□□ -2.09
LRCH3Q96II8 RNU6-269P-201ENST00000391077 97 ntBASIC1.97□□□□□ -2.09
LRCH3Q96II8 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
LRCH3Q96II8 RNU7-119P-201ENST00000459279 63 ntBASIC1.97□□□□□ -2.09
LRCH3Q96II8 MIR3198-2-201ENST00000577868 80 ntBASIC1.97□□□□□ -2.09
LRCH3Q96II8 SNORD18A-201ENST00000363753 72 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms