Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
RNF25Q96BH1 RNA5SP327-201ENST00000362494 101 ntBASIC2.07□□□□□ -2.08
RNF25Q96BH1 RNU4-45P-201ENST00000365469 141 ntBASIC2.07□□□□□ -2.08
RNF25Q96BH1 RNU6-1089P-201ENST00000516473 104 ntBASIC2.07□□□□□ -2.08
RNF25Q96BH1 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
RNF25Q96BH1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RNF25Q96BH1 MIR1289-2-201ENST00000408360 111 ntBASIC2.06□□□□□ -2.08
RNF25Q96BH1 RNA5SP147-201ENST00000516493 109 ntBASIC2.06□□□□□ -2.08
RNF25Q96BH1 AC012493.3-201ENST00000604494 112 ntBASIC2.06□□□□□ -2.08
RNF25Q96BH1 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
RNF25Q96BH1 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
RNF25Q96BH1 RNU6-656P-201ENST00000516785 107 ntBASIC2.05□□□□□ -2.08
RNF25Q96BH1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RNF25Q96BH1 SNORD114-1-201ENST00000362705 72 ntBASIC2.04□□□□□ -2.08
RNF25Q96BH1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
RNF25Q96BH1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.08
RNF25Q96BH1 RNU6-990P-201ENST00000364385 104 ntBASIC2.03□□□□□ -2.08
RNF25Q96BH1 RNU6-269P-201ENST00000391077 97 ntBASIC2.03□□□□□ -2.08
RNF25Q96BH1 MIR466-201ENST00000580653 84 ntBASIC2.03□□□□□ -2.08
RNF25Q96BH1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF25Q96BH1 MIR521-2-201ENST00000384818 87 ntBASIC2.02□□□□□ -2.09
RNF25Q96BH1 RNU6-548P-201ENST00000517083 115 ntBASIC2.02□□□□□ -2.09
RNF25Q96BH1 RNA5SP192-201ENST00000364404 120 ntBASIC2.01□□□□□ -2.09
RNF25Q96BH1 SNORA15B-2-201ENST00000384058 135 ntBASIC2.01□□□□□ -2.09
RNF25Q96BH1 SNORA15B-1-201ENST00000384334 135 ntBASIC2.01□□□□□ -2.09
RNF25Q96BH1 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
RNF25Q96BH1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.01□□□□□ -2.09
RNF25Q96BH1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
RNF25Q96BH1 uc_338.10-201ENST00000621872 182 ntBASIC2.01□□□□□ -2.09
RNF25Q96BH1 SNORD114-24-201ENST00000365029 72 ntBASIC2□□□□□ -2.09
RNF25Q96BH1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
RNF25Q96BH1 Y_RNA.676-201ENST00000516393 96 ntBASIC2□□□□□ -2.09
RNF25Q96BH1 RNU6-92P-201ENST00000605893 104 ntBASIC2□□□□□ -2.09
RNF25Q96BH1 AL162376.1-201ENST00000624117 175 ntBASIC2□□□□□ -2.09
RNF25Q96BH1 MIR6828-201ENST00000636181 60 ntBASIC2□□□□□ -2.09
RNF25Q96BH1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RNF25Q96BH1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RNF25Q96BH1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
RNF25Q96BH1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RNF25Q96BH1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.99□□□□□ -2.09
RNF25Q96BH1 RNA5SP227-201ENST00000516184 113 ntBASIC1.99□□□□□ -2.09
RNF25Q96BH1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.99□□□□□ -2.09
RNF25Q96BH1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF25Q96BH1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF25Q96BH1 MIR758-201ENST00000390227 88 ntBASIC1.98□□□□□ -2.09
RNF25Q96BH1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RNF25Q96BH1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RNF25Q96BH1 RNA5SP484-201ENST00000458857 111 ntBASIC1.98□□□□□ -2.09
RNF25Q96BH1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.98□□□□□ -2.09
RNF25Q96BH1 AL353997.5-201ENST00000618886 171 ntBASIC1.98□□□□□ -2.09
RNF25Q96BH1 RNA5SP99-201ENST00000364020 114 ntBASIC1.97□□□□□ -2.09
RNF25Q96BH1 Y_RNA.407-201ENST00000383986 113 ntBASIC1.97□□□□□ -2.09
RNF25Q96BH1 AC021146.9-201ENST00000512503 156 ntBASIC1.97□□□□□ -2.09
RNF25Q96BH1 RNA5SP458-201ENST00000516188 119 ntBASIC1.97□□□□□ -2.09
RNF25Q96BH1 RNU6-122P-201ENST00000516818 107 ntBASIC1.96□□□□□ -2.1
RNF25Q96BH1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
RNF25Q96BH1 SNORA25.8-201ENST00000364831 128 ntBASIC1.95□□□□□ -2.1
RNF25Q96BH1 MIR548C-201ENST00000384815 97 ntBASIC1.95□□□□□ -2.1
RNF25Q96BH1 SNORA40.17-201ENST00000517256 115 ntBASIC1.95□□□□□ -2.1
RNF25Q96BH1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RNF25Q96BH1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
RNF25Q96BH1 RNU6-1079P-201ENST00000362861 110 ntBASIC1.94□□□□□ -2.1
RNF25Q96BH1 MIR618-201ENST00000385287 98 ntBASIC1.94□□□□□ -2.1
RNF25Q96BH1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.93□□□□□ -2.1
RNF25Q96BH1 RNU6-829P-201ENST00000363700 112 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 SNORD26-201ENST00000384147 75 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 SNORD113-2-201ENST00000391082 72 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 AC003989.2-201ENST00000440224 169 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 AL157398.1-201ENST00000452981 186 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 SNORD124-201ENST00000459577 104 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 SCARNA17.3-201ENST00000516381 125 ntBASIC1.93□□□□□ -2.1
RNF25Q96BH1 SNORD48-201ENST00000364953 64 ntBASIC1.92□□□□□ -2.1
RNF25Q96BH1 AC006210.1-201ENST00000424882 111 ntBASIC1.92□□□□□ -2.1
RNF25Q96BH1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.92□□□□□ -2.1
RNF25Q96BH1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RNF25Q96BH1 SNORA63.6-201ENST00000364921 119 ntBASIC1.91□□□□□ -2.1
RNF25Q96BH1 RNA5SP255-201ENST00000516370 107 ntBASIC1.91□□□□□ -2.1
RNF25Q96BH1 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
RNF25Q96BH1 MIR548V-201ENST00000584165 80 ntBASIC1.91□□□□□ -2.1
RNF25Q96BH1 RNU1-124P-201ENST00000363861 145 ntBASIC1.9□□□□□ -2.11
RNF25Q96BH1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.9□□□□□ -2.11
RNF25Q96BH1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RNF25Q96BH1 MIR517B-201ENST00000385102 67 ntBASIC1.89□□□□□ -2.11
RNF25Q96BH1 MIR3938-201ENST00000582157 103 ntBASIC1.89□□□□□ -2.11
RNF25Q96BH1 Y_RNA.236-201ENST00000364427 111 ntBASIC1.88□□□□□ -2.11
RNF25Q96BH1 RNA5SP247-201ENST00000411181 105 ntBASIC1.88□□□□□ -2.11
RNF25Q96BH1 RPS29P23-201ENST00000458635 123 ntBASIC1.88□□□□□ -2.11
RNF25Q96BH1 RNA5SP268-201ENST00000516828 124 ntBASIC1.88□□□□□ -2.11
RNF25Q96BH1 MIR18A-201ENST00000362310 71 ntBASIC1.87□□□□□ -2.11
RNF25Q96BH1 MIR517C-201ENST00000385103 95 ntBASIC1.87□□□□□ -2.11
RNF25Q96BH1 SNORD110-201ENST00000408189 75 ntBASIC1.87□□□□□ -2.11
RNF25Q96BH1 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
RNF25Q96BH1 RNU6-698P-201ENST00000363523 107 ntBASIC1.86□□□□□ -2.11
RNF25Q96BH1 RNU6-34P-201ENST00000364874 107 ntBASIC1.86□□□□□ -2.11
RNF25Q96BH1 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
RNF25Q96BH1 AC011195.1-201ENST00000578177 177 ntBASIC1.86□□□□□ -2.11
RNF25Q96BH1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
RNF25Q96BH1 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
RNF25Q96BH1 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms