Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 Y_RNA.596-201ENST00000410462 109 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 AC093729.1-201ENST00000513074 128 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 RNU6-287P-201ENST00000516230 98 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 RNA5SP47-201ENST00000517230 109 ntBASIC0.72□□□□□ -2.29
ATP2A3Q93084 RNA5SP257-201ENST00000363023 116 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 RNU6-478P-201ENST00000363904 110 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 Y_RNA.316-201ENST00000365118 111 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 RNU6-1126P-201ENST00000384002 107 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 Y_RNA.426-201ENST00000384068 113 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 Y_RNA.437-201ENST00000384113 113 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 MIR1255A-201ENST00000408338 113 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 Y_RNA.607-201ENST00000410597 98 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 RNU6-135P-201ENST00000516769 101 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 MIR4666B-201ENST00000578142 81 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 MIR4639-201ENST00000584938 69 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 MIR8087-201ENST00000612745 78 ntBASIC0.71□□□□□ -2.3
ATP2A3Q93084 Y_RNA.219-201ENST00000364232 113 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 RNU6-652P-201ENST00000365488 107 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 RNU6-242P-201ENST00000384359 107 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 SNORD78.1-201ENST00000390866 65 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 RNU6-1275P-201ENST00000391087 107 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.7□□□□□ -2.3
ATP2A3Q93084 AL450471.1-201ENST00000447509 127 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 snoU13.17-201ENST00000458802 104 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.7□□□□□ -2.3
ATP2A3Q93084 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
ATP2A3Q93084 RNU6-716P-201ENST00000365621 103 ntBASIC0.69□□□□□ -2.3
ATP2A3Q93084 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.69□□□□□ -2.3
ATP2A3Q93084 RNU7-13P-201ENST00000516413 62 ntBASIC0.69□□□□□ -2.3
ATP2A3Q93084 RNA5SP94-201ENST00000516917 108 ntBASIC0.69□□□□□ -2.3
ATP2A3Q93084 Y_RNA.94-201ENST00000363068 106 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 RNU6-624P-201ENST00000363411 107 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 Y_RNA.239-201ENST00000364444 113 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 RNU6-726P-201ENST00000364680 107 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 MIR451A-201ENST00000385059 72 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 MIR519E-201ENST00000385075 84 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 MIR140-201ENST00000385282 100 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 MIR548U-201ENST00000390728 81 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 RNU6-935P-201ENST00000410371 100 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 MIR2113-201ENST00000459007 91 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 RNA5SP395-201ENST00000516567 118 ntBASIC0.68□□□□□ -2.3
ATP2A3Q93084 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNA5SP62-201ENST00000363457 110 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNU6-1051P-201ENST00000365471 102 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 SNORA24B-201ENST00000384176 131 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNU6-1052P-201ENST00000411398 104 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNU6-1108P-201ENST00000516308 104 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 RNU6-719P-201ENST00000516671 104 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 SCARNA16.5-201ENST00000517114 183 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 MIR6828-201ENST00000636181 60 ntBASIC0.67□□□□□ -2.3
ATP2A3Q93084 SNORD115-37-201ENST00000363768 82 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 RNU6-1229P-201ENST00000364295 107 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 Y_RNA.258-201ENST00000364613 105 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 Y_RNA.532-201ENST00000384590 113 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 SNORD41.1-201ENST00000391000 69 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 FGF7P7-201ENST00000514120 227 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 MIR4712-201ENST00000583750 82 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 MIR7107-201ENST00000611489 80 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 MIR3202-2-201ENST00000635980 79 ntBASIC0.66□□□□□ -2.3
ATP2A3Q93084 SNORA63.2-201ENST00000362603 126 ntBASIC0.65□□□□□ -2.31
ATP2A3Q93084 RNU6-161P-201ENST00000363051 106 ntBASIC0.65□□□□□ -2.31
ATP2A3Q93084 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.65□□□□□ -2.31
ATP2A3Q93084 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
ATP2A3Q93084 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
ATP2A3Q93084 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
ATP2A3Q93084 SNORD115-44-201ENST00000365391 82 ntBASIC0.64□□□□□ -2.31
ATP2A3Q93084 MIR1197-201ENST00000408818 88 ntBASIC0.64□□□□□ -2.31
ATP2A3Q93084 MIR330-201ENST00000362196 94 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 MIR617-201ENST00000385030 97 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 RNU6-269P-201ENST00000391077 97 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 AC093423.1-201ENST00000440817 142 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 RNA5SP268-201ENST00000516828 124 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 SNORA25.18-201ENST00000607153 114 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
ATP2A3Q93084 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
ATP2A3Q93084 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
ATP2A3Q93084 RNU6-857P-201ENST00000515893 110 ntBASIC0.62□□□□□ -2.31
ATP2A3Q93084 MIR4752-201ENST00000579672 72 ntBASIC0.62□□□□□ -2.31
ATP2A3Q93084 RNU1-29P-201ENST00000606574 126 ntBASIC0.62□□□□□ -2.31
ATP2A3Q93084 AC092634.7-201ENST00000621022 103 ntBASIC0.62□□□□□ -2.31
ATP2A3Q93084 RNU6-824P-201ENST00000363724 104 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 RNU6-129P-201ENST00000391022 107 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 RNU6-279P-201ENST00000391297 101 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 MIR548L-201ENST00000408303 86 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 RNA5SP484-201ENST00000458857 111 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 MIR4711-201ENST00000578274 70 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 Y_RNA.788-201ENST00000622394 112 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 AL162376.1-201ENST00000624117 175 ntBASIC0.61□□□□□ -2.31
ATP2A3Q93084 MIRLET7A1-201ENST00000362295 80 ntBASIC0.6□□□□□ -2.31
ATP2A3Q93084 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
ATP2A3Q93084 RNU6-557P-201ENST00000516842 110 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms