Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU7-74P-201ENST00000459104 62 ntBASIC0.79□□□□□ -2.28
ERCC4Q92889 PVT1_3.1-201ENST00000620853 95 ntBASIC0.79□□□□□ -2.28
ERCC4Q92889 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
ERCC4Q92889 RNU6-1051P-201ENST00000365471 102 ntBASIC0.78□□□□□ -2.28
ERCC4Q92889 RNU6-242P-201ENST00000384359 107 ntBASIC0.78□□□□□ -2.28
ERCC4Q92889 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
ERCC4Q92889 U3.27-201ENST00000391237 200 ntBASIC0.78□□□□□ -2.28
ERCC4Q92889 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
ERCC4Q92889 MIR4666B-201ENST00000578142 81 ntBASIC0.78□□□□□ -2.28
ERCC4Q92889 SNORA63.2-201ENST00000362603 126 ntBASIC0.77□□□□□ -2.29
ERCC4Q92889 RNU6-787P-201ENST00000384032 107 ntBASIC0.77□□□□□ -2.29
ERCC4Q92889 SNORA24B-201ENST00000384176 131 ntBASIC0.77□□□□□ -2.29
ERCC4Q92889 MIR451A-201ENST00000385059 72 ntBASIC0.77□□□□□ -2.29
ERCC4Q92889 MIR216A-201ENST00000385063 110 ntBASIC0.77□□□□□ -2.29
ERCC4Q92889 AL590095.2-201ENST00000604136 117 ntBASIC0.77□□□□□ -2.29
ERCC4Q92889 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
ERCC4Q92889 RNU6-269P-201ENST00000391077 97 ntBASIC0.76□□□□□ -2.29
ERCC4Q92889 MIR548L-201ENST00000408303 86 ntBASIC0.76□□□□□ -2.29
ERCC4Q92889 RN7SL793P-201ENST00000583259 296 ntBASIC0.76□□□□□ -2.29
ERCC4Q92889 MIR6779-201ENST00000617283 64 ntBASIC0.76□□□□□ -2.29
ERCC4Q92889 RNU6-573P-201ENST00000383938 106 ntBASIC0.75□□□□□ -2.29
ERCC4Q92889 AC092634.7-201ENST00000621022 103 ntBASIC0.75□□□□□ -2.29
ERCC4Q92889 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
ERCC4Q92889 MIR216B-201ENST00000390186 82 ntBASIC0.74□□□□□ -2.29
ERCC4Q92889 RNU6-557P-201ENST00000516842 110 ntBASIC0.74□□□□□ -2.29
ERCC4Q92889 RNU6-1057P-201ENST00000517162 102 ntBASIC0.74□□□□□ -2.29
ERCC4Q92889 MIR3140-201ENST00000583685 90 ntBASIC0.74□□□□□ -2.29
ERCC4Q92889 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
ERCC4Q92889 Y_RNA.219-201ENST00000364232 113 ntBASIC0.73□□□□□ -2.29
ERCC4Q92889 RNY4P3-201ENST00000365254 95 ntBASIC0.73□□□□□ -2.29
ERCC4Q92889 SNORA40.8-201ENST00000411034 126 ntBASIC0.73□□□□□ -2.29
ERCC4Q92889 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.73□□□□□ -2.29
ERCC4Q92889 FGF7P7-201ENST00000514120 227 ntBASIC0.73□□□□□ -2.29
ERCC4Q92889 RNU1-141P-201ENST00000364623 158 ntBASIC0.72□□□□□ -2.29
ERCC4Q92889 Y_RNA.316-201ENST00000365118 111 ntBASIC0.72□□□□□ -2.29
ERCC4Q92889 MIR548O2-201ENST00000616090 70 ntBASIC0.72□□□□□ -2.29
ERCC4Q92889 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
ERCC4Q92889 MIR518A1-201ENST00000385068 85 ntBASIC0.71□□□□□ -2.3
ERCC4Q92889 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
ERCC4Q92889 RNU1-29P-201ENST00000606574 126 ntBASIC0.71□□□□□ -2.3
ERCC4Q92889 MIR3202-2-201ENST00000635980 79 ntBASIC0.71□□□□□ -2.3
ERCC4Q92889 RNU6-478P-201ENST00000363904 110 ntBASIC0.7□□□□□ -2.3
ERCC4Q92889 snoU13.17-201ENST00000458802 104 ntBASIC0.7□□□□□ -2.3
ERCC4Q92889 SNORA25.18-201ENST00000607153 114 ntBASIC0.7□□□□□ -2.3
ERCC4Q92889 AC073869.9-201ENST00000641610 120 ntBASIC0.7□□□□□ -2.3
ERCC4Q92889 MT-TY-201ENST00000387409 66 ntBASIC0.69□□□□□ -2.3
ERCC4Q92889 AL450471.1-201ENST00000447509 127 ntBASIC0.69□□□□□ -2.3
ERCC4Q92889 RNA5SP484-201ENST00000458857 111 ntBASIC0.69□□□□□ -2.3
ERCC4Q92889 Y_RNA.660-201ENST00000516002 120 ntBASIC0.69□□□□□ -2.3
ERCC4Q92889 RNU5F-1-201ENST00000362507 117 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 Y_RNA.205-201ENST00000364128 113 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 RNU6-129P-201ENST00000391022 107 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 RNU6-1052P-201ENST00000411398 104 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 RNU6-719P-201ENST00000516671 104 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 AC018659.1-201ENST00000551083 169 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 MIR1245B-201ENST00000636115 69 ntBASIC0.68□□□□□ -2.3
ERCC4Q92889 RNU6-228P-201ENST00000362700 106 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 Y_RNA.437-201ENST00000384113 113 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ERCC4Q92889 SNORD77.2-201ENST00000391045 68 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 AC069271.1-201ENST00000445577 156 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
ERCC4Q92889 RNU6-315P-201ENST00000362666 107 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 Y_RNA.264-201ENST00000364665 102 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 SNORD78.1-201ENST00000390866 65 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 RNA5SP395-201ENST00000516567 118 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
ERCC4Q92889 MIRLET7A1-201ENST00000362295 80 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 RNU6-208P-201ENST00000362431 107 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 Y_RNA.313-201ENST00000365095 103 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 RNU6-652P-201ENST00000365488 107 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 RNU2-59P-201ENST00000410482 191 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 SNORD71-201ENST00000411292 86 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 AL157398.1-201ENST00000452981 186 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 AC097510.1-201ENST00000510945 133 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 uc_338.17-201ENST00000619633 179 ntBASIC0.65□□□□□ -2.31
ERCC4Q92889 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-161P-201ENST00000363051 106 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 Y_RNA.94-201ENST00000363068 106 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 SNORD114-23-201ENST00000363536 72 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-1124P-201ENST00000384169 107 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-1177P-201ENST00000391058 104 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-848P-201ENST00000515948 107 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-617P-201ENST00000516147 107 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-473P-201ENST00000516164 107 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNU6-1049P-201ENST00000516414 107 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 MIR4752-201ENST00000579672 72 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 MIR5706-201ENST00000579841 80 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 MIR4712-201ENST00000583750 82 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 SNORA70.25-201ENST00000612741 95 ntBASIC0.64□□□□□ -2.31
ERCC4Q92889 RNA5SP325-201ENST00000363756 130 ntBASIC0.63□□□□□ -2.31
ERCC4Q92889 RNU6-686P-201ENST00000364839 107 ntBASIC0.63□□□□□ -2.31
ERCC4Q92889 Y_RNA.606-201ENST00000410579 103 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms