Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL157398.1-201ENST00000452981 186 ntBASIC2.15□□□□□ -2.07
NKX2-3Q8TAU0 RNA5SP147-201ENST00000516493 109 ntBASIC2.15□□□□□ -2.07
NKX2-3Q8TAU0 SNORD114-4-201ENST00000363962 75 ntBASIC2.14□□□□□ -2.07
NKX2-3Q8TAU0 SNORD48-201ENST00000364953 64 ntBASIC2.14□□□□□ -2.07
NKX2-3Q8TAU0 MT-TY-201ENST00000387409 66 ntBASIC2.14□□□□□ -2.07
NKX2-3Q8TAU0 RNU1-123P-201ENST00000458950 160 ntBASIC2.14□□□□□ -2.07
NKX2-3Q8TAU0 RNU7-104P-201ENST00000459398 79 ntBASIC2.14□□□□□ -2.07
NKX2-3Q8TAU0 MIR517B-201ENST00000385102 67 ntBASIC2.13□□□□□ -2.07
NKX2-3Q8TAU0 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
NKX2-3Q8TAU0 AC008834.1-201ENST00000511612 175 ntBASIC2.13□□□□□ -2.07
NKX2-3Q8TAU0 RNU6-980P-201ENST00000516925 103 ntBASIC2.13□□□□□ -2.07
NKX2-3Q8TAU0 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.13□□□□□ -2.07
NKX2-3Q8TAU0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NKX2-3Q8TAU0 MIR1276-201ENST00000408707 83 ntBASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 RNU7-119P-201ENST00000459279 63 ntBASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 RNU7-174P-201ENST00000516248 59 ntBASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 MIR4255-201ENST00000579351 72 ntBASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 MIR548AD-201ENST00000584780 82 ntBASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-3Q8TAU0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 SNORD41.1-201ENST00000391000 69 ntBASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 AC048334.1-201ENST00000477975 159 ntBASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 AL512310.8-201ENST00000550183 120 ntBASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 MIR502-201ENST00000606349 86 ntBASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX2-3Q8TAU0 AL591704.2-201ENST00000421658 181 ntBASIC2.1□□□□□ -2.07
NKX2-3Q8TAU0 RNU6-135P-201ENST00000516769 101 ntBASIC2.1□□□□□ -2.07
NKX2-3Q8TAU0 AC023827.1-201ENST00000569247 97 ntBASIC2.1□□□□□ -2.07
NKX2-3Q8TAU0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX2-3Q8TAU0 MIR4422-201ENST00000581938 83 ntBASIC2.1□□□□□ -2.07
NKX2-3Q8TAU0 RNU6-392P-201ENST00000364926 101 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 RNU6-42P-201ENST00000384165 107 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 RNU7-95P-201ENST00000459222 64 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 RNU7-21P-201ENST00000459430 62 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 AC019176.1-201ENST00000518519 225 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 MIR3937-201ENST00000580135 106 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 MIR4303-201ENST00000581299 66 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 U2.7-201ENST00000619197 100 ntBASIC2.09□□□□□ -2.07
NKX2-3Q8TAU0 Y_RNA.540-201ENST00000384638 111 ntBASIC2.08□□□□□ -2.08
NKX2-3Q8TAU0 MIR548C-201ENST00000384815 97 ntBASIC2.08□□□□□ -2.08
NKX2-3Q8TAU0 RNU1-78P-201ENST00000391248 165 ntBASIC2.08□□□□□ -2.08
NKX2-3Q8TAU0 AC021146.9-201ENST00000512503 156 ntBASIC2.08□□□□□ -2.08
NKX2-3Q8TAU0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NKX2-3Q8TAU0 Y_RNA.363-201ENST00000365529 113 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 SNORA15B-2-201ENST00000384058 135 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 SNORA15B-1-201ENST00000384334 135 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 MIR934-201ENST00000401241 83 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 SNORA31.2-201ENST00000516019 134 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 MIR4460-201ENST00000577862 86 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 U4.4-201ENST00000620626 117 ntBASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NKX2-3Q8TAU0 MIR1-1-201ENST00000362147 71 ntBASIC2.06□□□□□ -2.08
NKX2-3Q8TAU0 RNU6-994P-201ENST00000410507 111 ntBASIC2.06□□□□□ -2.08
NKX2-3Q8TAU0 SNORA80D-201ENST00000384488 135 ntBASIC2.05□□□□□ -2.08
NKX2-3Q8TAU0 MIR100-201ENST00000385259 80 ntBASIC2.05□□□□□ -2.08
NKX2-3Q8TAU0 Y_RNA.633-201ENST00000459107 95 ntBASIC2.05□□□□□ -2.08
NKX2-3Q8TAU0 RNA5SP480-201ENST00000516840 109 ntBASIC2.05□□□□□ -2.08
NKX2-3Q8TAU0 MIR4639-201ENST00000584938 69 ntBASIC2.05□□□□□ -2.08
NKX2-3Q8TAU0 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
NKX2-3Q8TAU0 RNU7-90P-201ENST00000459216 62 ntBASIC2.04□□□□□ -2.08
NKX2-3Q8TAU0 RNA5SP220-201ENST00000516298 104 ntBASIC2.04□□□□□ -2.08
NKX2-3Q8TAU0 7SK.11-201ENST00000615477 250 ntBASIC2.04□□□□□ -2.08
NKX2-3Q8TAU0 AL157834.3-201ENST00000615543 103 ntBASIC2.04□□□□□ -2.08
NKX2-3Q8TAU0 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
NKX2-3Q8TAU0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.03□□□□□ -2.08
NKX2-3Q8TAU0 RNU1-141P-201ENST00000364623 158 ntBASIC2.02□□□□□ -2.09
NKX2-3Q8TAU0 MIR520F-201ENST00000384824 87 ntBASIC2.02□□□□□ -2.09
NKX2-3Q8TAU0 MIR4452-201ENST00000583004 71 ntBASIC2.02□□□□□ -2.09
NKX2-3Q8TAU0 AC012493.3-201ENST00000604494 112 ntBASIC2.02□□□□□ -2.09
NKX2-3Q8TAU0 AL136317.1-201ENST00000612653 226 ntBASIC2.02□□□□□ -2.09
NKX2-3Q8TAU0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.02□□□□□ -2.09
NKX2-3Q8TAU0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 RNA5SP325-201ENST00000363756 130 ntBASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 RNU6-35P-201ENST00000384530 107 ntBASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 RN7SKP88-201ENST00000516847 250 ntBASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 7SK.8-201ENST00000612110 250 ntBASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 7SK.13-201ENST00000622040 250 ntBASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NKX2-3Q8TAU0 RNU4-33P-201ENST00000364316 85 ntBASIC2□□□□□ -2.09
NKX2-3Q8TAU0 SNORD28-201ENST00000384706 75 ntBASIC2□□□□□ -2.09
NKX2-3Q8TAU0 RNU6-930P-201ENST00000390938 100 ntBASIC2□□□□□ -2.09
NKX2-3Q8TAU0 MIR1827-201ENST00000408549 66 ntBASIC2□□□□□ -2.09
NKX2-3Q8TAU0 SNORA7.1-201ENST00000363750 139 ntBASIC1.99□□□□□ -2.09
NKX2-3Q8TAU0 AC002350.1-201ENST00000490759 375 ntBASIC1.99□□□□□ -2.09
NKX2-3Q8TAU0 AC244669.1-204ENST00000621564 178 ntBASIC1.99□□□□□ -2.09
NKX2-3Q8TAU0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.98□□□□□ -2.09
NKX2-3Q8TAU0 SNORD53B-201ENST00000577887 78 ntBASIC1.98□□□□□ -2.09
NKX2-3Q8TAU0 RMST_2.1-201ENST00000617263 136 ntBASIC1.98□□□□□ -2.09
NKX2-3Q8TAU0 MIR6734-201ENST00000621166 68 ntBASIC1.98□□□□□ -2.09
NKX2-3Q8TAU0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms