Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 U4.4-201ENST00000620626 117 ntBASIC1.82□□□□□ -2.12
NEDD1Q8NHV4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 RNU1-42P-201ENST00000364033 160 ntBASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 MIR1323-201ENST00000408090 73 ntBASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 RNU7-174P-201ENST00000516248 59 ntBASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 AL157834.3-201ENST00000615543 103 ntBASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NEDD1Q8NHV4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NEDD1Q8NHV4 RNU6-902P-201ENST00000517212 91 ntBASIC1.8□□□□□ -2.12
NEDD1Q8NHV4 AL512310.8-201ENST00000550183 120 ntBASIC1.8□□□□□ -2.12
NEDD1Q8NHV4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NEDD1Q8NHV4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 MT-TY-201ENST00000387409 66 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 AP1B1P2-201ENST00000416196 106 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 snoU13.13-201ENST00000458842 104 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 snoU13.31-201ENST00000607291 104 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 U2.7-201ENST00000619197 100 ntBASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NEDD1Q8NHV4 RNU6-35P-201ENST00000384530 107 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 MIR521-2-201ENST00000384818 87 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 RNU1-119P-201ENST00000391122 165 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 AC079140.2-201ENST00000506193 142 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 uc_338.10-201ENST00000621872 182 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 AC067863.3-201ENST00000624172 122 ntBASIC1.78□□□□□ -2.12
NEDD1Q8NHV4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.77□□□□□ -2.13
NEDD1Q8NHV4 RNU7-21P-201ENST00000459430 62 ntBASIC1.77□□□□□ -2.13
NEDD1Q8NHV4 SNORA31.2-201ENST00000516019 134 ntBASIC1.77□□□□□ -2.13
NEDD1Q8NHV4 AC018659.1-201ENST00000551083 169 ntBASIC1.77□□□□□ -2.13
NEDD1Q8NHV4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.77□□□□□ -2.13
NEDD1Q8NHV4 RNU6-698P-201ENST00000363523 107 ntBASIC1.76□□□□□ -2.13
NEDD1Q8NHV4 RNU6-34P-201ENST00000364874 107 ntBASIC1.76□□□□□ -2.13
NEDD1Q8NHV4 RNU6-520P-201ENST00000384717 104 ntBASIC1.76□□□□□ -2.13
NEDD1Q8NHV4 RNU7-95P-201ENST00000459222 64 ntBASIC1.76□□□□□ -2.13
NEDD1Q8NHV4 AL136317.1-201ENST00000612653 226 ntBASIC1.76□□□□□ -2.13
NEDD1Q8NHV4 SNORA41B-201ENST00000384785 128 ntBASIC1.75□□□□□ -2.13
NEDD1Q8NHV4 MIR548C-201ENST00000384815 97 ntBASIC1.75□□□□□ -2.13
NEDD1Q8NHV4 SNORD41.1-201ENST00000391000 69 ntBASIC1.75□□□□□ -2.13
NEDD1Q8NHV4 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
NEDD1Q8NHV4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.75□□□□□ -2.13
NEDD1Q8NHV4 SNORA31.24-201ENST00000517232 57 ntBASIC1.75□□□□□ -2.13
NEDD1Q8NHV4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 MIR517B-201ENST00000385102 67 ntBASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 MIR644A-201ENST00000385262 94 ntBASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 SNORD113-2-201ENST00000391082 72 ntBASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 MIR3937-201ENST00000580135 106 ntBASIC1.74□□□□□ -2.13
NEDD1Q8NHV4 Y_RNA.250-201ENST00000364542 110 ntBASIC1.73□□□□□ -2.13
NEDD1Q8NHV4 RNU6-1162P-201ENST00000384443 104 ntBASIC1.73□□□□□ -2.13
NEDD1Q8NHV4 MIR520F-201ENST00000384824 87 ntBASIC1.73□□□□□ -2.13
NEDD1Q8NHV4 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
NEDD1Q8NHV4 Y_RNA.633-201ENST00000459107 95 ntBASIC1.73□□□□□ -2.13
NEDD1Q8NHV4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
NEDD1Q8NHV4 MIR499A-201ENST00000384903 122 ntBASIC1.72□□□□□ -2.13
NEDD1Q8NHV4 MIR100-201ENST00000385259 80 ntBASIC1.72□□□□□ -2.13
NEDD1Q8NHV4 AL591704.2-201ENST00000421658 181 ntBASIC1.72□□□□□ -2.13
NEDD1Q8NHV4 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
NEDD1Q8NHV4 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
NEDD1Q8NHV4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NEDD1Q8NHV4 SNORA33.1-201ENST00000364957 130 ntBASIC1.71□□□□□ -2.14
NEDD1Q8NHV4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
NEDD1Q8NHV4 RNU5B-6P-201ENST00000516765 68 ntBASIC1.71□□□□□ -2.14
NEDD1Q8NHV4 MIR4460-201ENST00000577862 86 ntBASIC1.71□□□□□ -2.14
NEDD1Q8NHV4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.71□□□□□ -2.14
NEDD1Q8NHV4 RMST_2.1-201ENST00000617263 136 ntBASIC1.71□□□□□ -2.14
NEDD1Q8NHV4 RNU1-141P-201ENST00000364623 158 ntBASIC1.7□□□□□ -2.14
NEDD1Q8NHV4 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
NEDD1Q8NHV4 AC244669.1-204ENST00000621564 178 ntBASIC1.7□□□□□ -2.14
NEDD1Q8NHV4 RNU6-726P-201ENST00000364680 107 ntBASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 SNORD28-201ENST00000384706 75 ntBASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 RNU6-994P-201ENST00000410507 111 ntBASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.69□□□□□ -2.14
NEDD1Q8NHV4 MIR1-1-201ENST00000362147 71 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 SNORD33-201ENST00000362761 85 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 Y_RNA.125-201ENST00000363371 111 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 Y_RNA.325-201ENST00000365171 122 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 RNU6-1246P-201ENST00000391064 107 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 MIR1827-201ENST00000408549 66 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 RNU7-74P-201ENST00000459104 62 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 AC002350.1-201ENST00000490759 375 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
NEDD1Q8NHV4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.67□□□□□ -2.14
NEDD1Q8NHV4 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
NEDD1Q8NHV4 MIR548F3-201ENST00000408509 87 ntBASIC1.67□□□□□ -2.14
NEDD1Q8NHV4 SNORD79.1-201ENST00000516069 84 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms