Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNA5SP117-201ENST00000365294 118 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.433-201ENST00000384089 102 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 AC244098.3-201ENST00000424803 96 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 snoU13.17-201ENST00000458802 104 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-1108P-201ENST00000516308 104 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 RNU7-13P-201ENST00000516413 62 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 MIR4714-201ENST00000580728 77 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 MIR3140-201ENST00000583685 90 ntBASIC0.92□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-161P-201ENST00000363051 106 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-686P-201ENST00000364839 107 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 MIR451A-201ENST00000385059 72 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 SNORD77.2-201ENST00000391045 68 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 MIR2113-201ENST00000459007 91 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 RNU7-104P-201ENST00000459398 79 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 RNA5SP47-201ENST00000517230 109 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 AC244669.1-204ENST00000621564 178 ntBASIC0.91□□□□□ -2.26
SLC44A3Q8N4M1 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
SLC44A3Q8N4M1 SNORD99-201ENST00000408612 74 ntBASIC0.9□□□□□ -2.27
SLC44A3Q8N4M1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
SLC44A3Q8N4M1 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-208P-201ENST00000362431 107 ntBASIC0.89□□□□□ -2.27
SLC44A3Q8N4M1 SNORD114-23-201ENST00000363536 72 ntBASIC0.89□□□□□ -2.27
SLC44A3Q8N4M1 AC010487.4-201ENST00000637027 61 ntBASIC0.89□□□□□ -2.27
SLC44A3Q8N4M1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SLC44A3Q8N4M1 MIR18A-201ENST00000362310 71 ntBASIC0.88□□□□□ -2.27
SLC44A3Q8N4M1 RNU5F-1-201ENST00000362507 117 ntBASIC0.88□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.88□□□□□ -2.27
SLC44A3Q8N4M1 MIR617-201ENST00000385030 97 ntBASIC0.88□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-469P-201ENST00000516253 101 ntBASIC0.88□□□□□ -2.27
SLC44A3Q8N4M1 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
SLC44A3Q8N4M1 Y_RNA.264-201ENST00000364665 102 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-726P-201ENST00000364680 107 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 MIR519E-201ENST00000385075 84 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 AL353765.1-201ENST00000605514 183 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 MIR6513-201ENST00000621188 64 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 Y_RNA.788-201ENST00000622394 112 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 AC067863.3-201ENST00000624172 122 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 MIR6828-201ENST00000636181 60 ntBASIC0.87□□□□□ -2.27
SLC44A3Q8N4M1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-1094P-201ENST00000362416 104 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 SNORA36.1-201ENST00000363424 132 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 RNY4P3-201ENST00000365254 95 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 U3.27-201ENST00000391237 200 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 AC074348.1-201ENST00000426503 132 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 AC093423.1-201ENST00000440817 142 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 SCARNA18B-201ENST00000458806 135 ntBASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
SLC44A3Q8N4M1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 AC145423.2-201ENST00000610631 239 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 U6.81-201ENST00000612550 106 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 AL109933.3-201ENST00000619095 188 ntBASIC0.84□□□□□ -2.27
SLC44A3Q8N4M1 RNU6-824P-201ENST00000363724 104 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-1296P-201ENST00000383879 107 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 Y_RNA.606-201ENST00000410579 103 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-1052P-201ENST00000411398 104 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-719P-201ENST00000516671 104 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-303P-201ENST00000517091 106 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
SLC44A3Q8N4M1 Y_RNA.12-201ENST00000362393 112 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNA5SP257-201ENST00000363023 116 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-776P-201ENST00000364403 104 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-1022P-201ENST00000365049 104 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNU2-59P-201ENST00000410482 191 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 AC097510.1-201ENST00000510945 133 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNA5SP94-201ENST00000516917 108 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-1057P-201ENST00000517162 102 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 YWHAEP2-201ENST00000580066 112 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 YWHAEP3-201ENST00000582767 121 ntBASIC0.82□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-340P-201ENST00000364005 107 ntBASIC0.81□□□□□ -2.28
SLC44A3Q8N4M1 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
SLC44A3Q8N4M1 MIR548O2-201ENST00000616090 70 ntBASIC0.81□□□□□ -2.28
SLC44A3Q8N4M1 AL162376.1-201ENST00000624117 175 ntBASIC0.81□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-716P-201ENST00000365621 103 ntBASIC0.8□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-1177P-201ENST00000391058 104 ntBASIC0.8□□□□□ -2.28
SLC44A3Q8N4M1 RNA5SP121-201ENST00000516537 101 ntBASIC0.8□□□□□ -2.28
SLC44A3Q8N4M1 MIR8087-201ENST00000612745 78 ntBASIC0.8□□□□□ -2.28
SLC44A3Q8N4M1 MIR1297-201ENST00000637311 77 ntBASIC0.8□□□□□ -2.28
SLC44A3Q8N4M1 MIR4662A-201ENST00000637499 67 ntBASIC0.8□□□□□ -2.28
SLC44A3Q8N4M1 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 MIR216B-201ENST00000390186 82 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-269P-201ENST00000391077 97 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 MIR889-201ENST00000401280 79 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 RNU7-74P-201ENST00000459104 62 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-523P-201ENST00000516304 54 ntBASIC0.79□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-154P-201ENST00000384306 106 ntBASIC0.78□□□□□ -2.28
SLC44A3Q8N4M1 RNU6-380P-201ENST00000410207 107 ntBASIC0.78□□□□□ -2.28
SLC44A3Q8N4M1 MIR4484-201ENST00000582855 83 ntBASIC0.78□□□□□ -2.28
SLC44A3Q8N4M1 MIR7107-201ENST00000611489 80 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms