Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTND5P18-201ENST00000445624 1801 ntBASIC-1.02□□□□□ -2.57
NUDCD3Q8IVD9 SNORA13-201ENST00000458790 133 ntBASIC-1.02□□□□□ -2.57
NUDCD3Q8IVD9 RNU6-65P-201ENST00000516332 98 ntBASIC-1.02□□□□□ -2.57
NUDCD3Q8IVD9 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.02□□□□□ -2.57
NUDCD3Q8IVD9 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 RNU6-502P-201ENST00000362419 108 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 RNU6-804P-201ENST00000384286 107 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 MIR577-201ENST00000385196 96 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 RNU6-719P-201ENST00000516671 104 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 MIR4536-1-201ENST00000583537 88 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 MIR5704-201ENST00000584029 77 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 AC004792.1-201ENST00000614523 137 ntBASIC-1.03□□□□□ -2.57
NUDCD3Q8IVD9 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 MIR569-201ENST00000385228 96 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 FGF7P7-201ENST00000514120 227 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 RNU6-388P-201ENST00000517012 105 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 RNU6-389P-201ENST00000517048 105 ntBASIC-1.04□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.05□□□□□ -2.58
NUDCD3Q8IVD9 SNORD50.2-201ENST00000365465 70 ntBASIC-1.05□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.05□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.05□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.05□□□□□ -2.58
NUDCD3Q8IVD9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.05□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR518B-201ENST00000385127 83 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR4694-201ENST00000578534 80 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR3179-1-201ENST00000578940 84 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR3179-2-201ENST00000579107 84 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR3144-201ENST00000579460 79 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR3179-3-201ENST00000579566 84 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 MIR3179-4-201ENST00000617599 84 ntBASIC-1.06□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.07□□□□□ -2.58
NUDCD3Q8IVD9 RNA5SP25-201ENST00000410815 110 ntBASIC-1.07□□□□□ -2.58
NUDCD3Q8IVD9 RNU7-85P-201ENST00000458851 63 ntBASIC-1.07□□□□□ -2.58
NUDCD3Q8IVD9 RNA5SP272-201ENST00000516095 111 ntBASIC-1.07□□□□□ -2.58
NUDCD3Q8IVD9 RNU6-881P-201ENST00000516813 102 ntBASIC-1.07□□□□□ -2.58
NUDCD3Q8IVD9 AL513043.2-201ENST00000573941 143 ntBASIC-1.07□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.08□□□□□ -2.58
NUDCD3Q8IVD9 RNU6-721P-201ENST00000410155 105 ntBASIC-1.08□□□□□ -2.58
NUDCD3Q8IVD9 RNU6-832P-201ENST00000363319 107 ntBASIC-1.09□□□□□ -2.58
NUDCD3Q8IVD9 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.09□□□□□ -2.58
NUDCD3Q8IVD9 SNORD22.1-201ENST00000516331 125 ntBASIC-1.09□□□□□ -2.58
NUDCD3Q8IVD9 RNU6-132P-201ENST00000383863 107 ntBASIC-1.1□□□□□ -2.59
NUDCD3Q8IVD9 RNA5SP395-201ENST00000516567 118 ntBASIC-1.1□□□□□ -2.59
NUDCD3Q8IVD9 MIR6854-201ENST00000614935 69 ntBASIC-1.1□□□□□ -2.59
NUDCD3Q8IVD9 AL035470.1-201ENST00000622571 220 ntBASIC-1.1□□□□□ -2.59
NUDCD3Q8IVD9 RNY3P2-201ENST00000362918 102 ntBASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 MIR8068-201ENST00000618032 68 ntBASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 snoR1.1-201ENST00000628177 80 ntBASIC-1.11□□□□□ -2.59
NUDCD3Q8IVD9 SNORA63.6-201ENST00000364921 119 ntBASIC-1.12□□□□□ -2.59
NUDCD3Q8IVD9 RNU6-426P-201ENST00000516464 97 ntBASIC-1.12□□□□□ -2.59
NUDCD3Q8IVD9 MIR3613-201ENST00000579844 87 ntBASIC-1.12□□□□□ -2.59
NUDCD3Q8IVD9 SNORA63.2-201ENST00000362603 126 ntBASIC-1.13□□□□□ -2.59
NUDCD3Q8IVD9 RNU4-36P-201ENST00000364294 144 ntBASIC-1.13□□□□□ -2.59
NUDCD3Q8IVD9 MIR3140-201ENST00000583685 90 ntBASIC-1.13□□□□□ -2.59
NUDCD3Q8IVD9 RNY1P7-201ENST00000384743 110 ntBASIC-1.14□□□□□ -2.59
NUDCD3Q8IVD9 RNU6-772P-201ENST00000516042 105 ntBASIC-1.14□□□□□ -2.59
NUDCD3Q8IVD9 MTND5P41-201ENST00000517498 206 ntBASIC-1.14□□□□□ -2.59
NUDCD3Q8IVD9 MIR4679-2-201ENST00000578358 77 ntBASIC-1.14□□□□□ -2.59
NUDCD3Q8IVD9 MIR3064-201ENST00000581130 66 ntBASIC-1.14□□□□□ -2.59
NUDCD3Q8IVD9 RNU6-495P-201ENST00000362995 107 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 SNORD114-15-201ENST00000364687 72 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 MT-TG-201ENST00000387429 68 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 MIR548U-201ENST00000390728 81 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 RNU6-592P-201ENST00000411333 103 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 AC022137.1-201ENST00000483735 151 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 AC068339.1-201ENST00000526965 141 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 MIR4439-201ENST00000583746 80 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 MIR6086-201ENST00000638065 55 ntBASIC-1.15□□□□□ -2.59
NUDCD3Q8IVD9 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.16□□□□□ -2.6
NUDCD3Q8IVD9 MIR517B-201ENST00000385102 67 ntBASIC-1.16□□□□□ -2.6
NUDCD3Q8IVD9 MIRLET7B-201ENST00000385140 83 ntBASIC-1.16□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-337P-201ENST00000391243 106 ntBASIC-1.16□□□□□ -2.6
NUDCD3Q8IVD9 MTND4LP9-201ENST00000427694 174 ntBASIC-1.16□□□□□ -2.6
NUDCD3Q8IVD9 AP000533.3-201ENST00000447704 118 ntBASIC-1.16□□□□□ -2.6
NUDCD3Q8IVD9 AL157777.2-201ENST00000258070 137 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 SNORD45B-201ENST00000364617 72 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 SNORD74.6-201ENST00000364796 70 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-644P-201ENST00000391155 98 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 AC104996.3-201ENST00000590718 94 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 AC103810.7-201ENST00000607821 91 ntBASIC-1.17□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.18□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.18□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-990P-201ENST00000364385 104 ntBASIC-1.18□□□□□ -2.6
NUDCD3Q8IVD9 SNORD115-23-201ENST00000364461 82 ntBASIC-1.18□□□□□ -2.6
NUDCD3Q8IVD9 SNORA24B-201ENST00000384176 131 ntBASIC-1.18□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.18□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms