Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
LAPTM4BQ86VI4 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
LAPTM4BQ86VI4 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
LAPTM4BQ86VI4 RNU6-980P-201ENST00000516925 103 ntBASIC1.98□□□□□ -2.09
LAPTM4BQ86VI4 RNU6-231P-201ENST00000517122 103 ntBASIC1.98□□□□□ -2.09
LAPTM4BQ86VI4 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
LAPTM4BQ86VI4 SNORA9.1-201ENST00000362412 131 ntBASIC1.97□□□□□ -2.09
LAPTM4BQ86VI4 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
LAPTM4BQ86VI4 SNORD116.2-201ENST00000391251 93 ntBASIC1.97□□□□□ -2.09
LAPTM4BQ86VI4 MIR1289-2-201ENST00000408360 111 ntBASIC1.97□□□□□ -2.09
LAPTM4BQ86VI4 SNORA70.22-201ENST00000517160 124 ntBASIC1.97□□□□□ -2.09
LAPTM4BQ86VI4 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.97□□□□□ -2.09
LAPTM4BQ86VI4 SNORD18A-201ENST00000363753 72 ntBASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 RNU6-35P-201ENST00000384530 107 ntBASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 Y_RNA.633-201ENST00000459107 95 ntBASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
LAPTM4BQ86VI4 RNA5SP432-201ENST00000362480 116 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 SNORA63.6-201ENST00000364921 119 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 SNORA8.2-201ENST00000384372 139 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 SNORD89-201ENST00000390981 114 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 RNA5SP47-201ENST00000517230 109 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
LAPTM4BQ86VI4 MIR222-201ENST00000384992 110 ntBASIC1.94□□□□□ -2.1
LAPTM4BQ86VI4 RNU6-1246P-201ENST00000391064 107 ntBASIC1.94□□□□□ -2.1
LAPTM4BQ86VI4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LAPTM4BQ86VI4 SNORA25.8-201ENST00000364831 128 ntBASIC1.93□□□□□ -2.1
LAPTM4BQ86VI4 MIR652-201ENST00000385278 98 ntBASIC1.93□□□□□ -2.1
LAPTM4BQ86VI4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LAPTM4BQ86VI4 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
LAPTM4BQ86VI4 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
LAPTM4BQ86VI4 RNU4-33P-201ENST00000364316 85 ntBASIC1.92□□□□□ -2.1
LAPTM4BQ86VI4 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
LAPTM4BQ86VI4 RNU6-930P-201ENST00000390938 100 ntBASIC1.92□□□□□ -2.1
LAPTM4BQ86VI4 SCARNA17.3-201ENST00000516381 125 ntBASIC1.92□□□□□ -2.1
LAPTM4BQ86VI4 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
LAPTM4BQ86VI4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LAPTM4BQ86VI4 MIR504-201ENST00000385065 83 ntBASIC1.91□□□□□ -2.1
LAPTM4BQ86VI4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.91□□□□□ -2.1
LAPTM4BQ86VI4 MIR3678-201ENST00000578455 94 ntBASIC1.91□□□□□ -2.1
LAPTM4BQ86VI4 MIR7843-201ENST00000622274 79 ntBASIC1.91□□□□□ -2.1
LAPTM4BQ86VI4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LAPTM4BQ86VI4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
LAPTM4BQ86VI4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
LAPTM4BQ86VI4 Y_RNA.407-201ENST00000383986 113 ntBASIC1.9□□□□□ -2.11
LAPTM4BQ86VI4 RNU1-92P-201ENST00000517017 135 ntBASIC1.9□□□□□ -2.11
LAPTM4BQ86VI4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 MIR582-201ENST00000365731 98 ntBASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 SNORD105-201ENST00000386910 85 ntBASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 AC002429.1-201ENST00000437672 148 ntBASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 RNU6-237P-201ENST00000515985 71 ntBASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 CYP3A54P-201ENST00000566950 75 ntBASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 MIR4473-201ENST00000583731 91 ntBASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LAPTM4BQ86VI4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LAPTM4BQ86VI4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
LAPTM4BQ86VI4 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
LAPTM4BQ86VI4 U6.96-201ENST00000636425 70 ntBASIC1.88□□□□□ -2.11
LAPTM4BQ86VI4 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
LAPTM4BQ86VI4 MIR548AE1-201ENST00000583292 70 ntBASIC1.87□□□□□ -2.11
LAPTM4BQ86VI4 MIR517C-201ENST00000385103 95 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 MIR764-201ENST00000390811 85 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 SNORD12-201ENST00000391002 90 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 MIR548E-201ENST00000408287 88 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 AL591806.2-201ENST00000433122 173 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 U7.7-201ENST00000459276 60 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 SNORA40.16-201ENST00000517238 121 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 MIR4524B-201ENST00000581569 115 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 MIR7110-201ENST00000612638 86 ntBASIC1.86□□□□□ -2.11
LAPTM4BQ86VI4 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
LAPTM4BQ86VI4 RNU6-518P-201ENST00000516056 96 ntBASIC1.85□□□□□ -2.11
LAPTM4BQ86VI4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.85□□□□□ -2.11
LAPTM4BQ86VI4 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
LAPTM4BQ86VI4 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
LAPTM4BQ86VI4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
LAPTM4BQ86VI4 MIR527-201ENST00000385244 85 ntBASIC1.84□□□□□ -2.11
LAPTM4BQ86VI4 AL162376.1-201ENST00000624117 175 ntBASIC1.84□□□□□ -2.11
LAPTM4BQ86VI4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
LAPTM4BQ86VI4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
LAPTM4BQ86VI4 SNORD116-16-201ENST00000384533 92 ntBASIC1.83□□□□□ -2.12
LAPTM4BQ86VI4 AC006210.1-201ENST00000424882 111 ntBASIC1.83□□□□□ -2.12
LAPTM4BQ86VI4 AL021921.1-201ENST00000442774 93 ntBASIC1.83□□□□□ -2.12
LAPTM4BQ86VI4 MIR3612-201ENST00000579753 87 ntBASIC1.83□□□□□ -2.12
LAPTM4BQ86VI4 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
LAPTM4BQ86VI4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.82□□□□□ -2.12
LAPTM4BQ86VI4 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
LAPTM4BQ86VI4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
LAPTM4BQ86VI4 Y_RNA.74-201ENST00000362911 99 ntBASIC1.81□□□□□ -2.12
LAPTM4BQ86VI4 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
LAPTM4BQ86VI4 RNA5SP227-201ENST00000516184 113 ntBASIC1.81□□□□□ -2.12
LAPTM4BQ86VI4 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
LAPTM4BQ86VI4 SNORD110-201ENST00000408189 75 ntBASIC1.8□□□□□ -2.12
LAPTM4BQ86VI4 snoU13.23-201ENST00000458863 104 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms