Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 AL136317.1-201ENST00000612653 226 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 7SK.11-201ENST00000615477 250 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RNFT1Q5M7Z0 RNU1-141P-201ENST00000364623 158 ntBASIC1.75□□□□□ -2.13
RNFT1Q5M7Z0 RNU7-90P-201ENST00000459216 62 ntBASIC1.75□□□□□ -2.13
RNFT1Q5M7Z0 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
RNFT1Q5M7Z0 RNU6-231P-201ENST00000517122 103 ntBASIC1.75□□□□□ -2.13
RNFT1Q5M7Z0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.75□□□□□ -2.13
RNFT1Q5M7Z0 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 snoU13.13-201ENST00000458842 104 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 RN7SKP88-201ENST00000516847 250 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 7SK.8-201ENST00000612110 250 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 uc_338.20-201ENST00000621563 178 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 7SK.13-201ENST00000622040 250 ntBASIC1.74□□□□□ -2.13
RNFT1Q5M7Z0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.73□□□□□ -2.13
RNFT1Q5M7Z0 SNORD28-201ENST00000384706 75 ntBASIC1.73□□□□□ -2.13
RNFT1Q5M7Z0 SNORA41B-201ENST00000384785 128 ntBASIC1.73□□□□□ -2.13
RNFT1Q5M7Z0 AC244669.1-204ENST00000621564 178 ntBASIC1.73□□□□□ -2.13
RNFT1Q5M7Z0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.72□□□□□ -2.13
RNFT1Q5M7Z0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.72□□□□□ -2.13
RNFT1Q5M7Z0 MIR548F3-201ENST00000408509 87 ntBASIC1.72□□□□□ -2.13
RNFT1Q5M7Z0 MIR1827-201ENST00000408549 66 ntBASIC1.72□□□□□ -2.13
RNFT1Q5M7Z0 RMST_2.1-201ENST00000617263 136 ntBASIC1.72□□□□□ -2.13
RNFT1Q5M7Z0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 MIR758-201ENST00000390227 88 ntBASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 AC002350.1-201ENST00000490759 375 ntBASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
RNFT1Q5M7Z0 RNU6-726P-201ENST00000364680 107 ntBASIC1.7□□□□□ -2.14
RNFT1Q5M7Z0 SNORA33.1-201ENST00000364957 130 ntBASIC1.7□□□□□ -2.14
RNFT1Q5M7Z0 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
RNFT1Q5M7Z0 MIR548L-201ENST00000408303 86 ntBASIC1.7□□□□□ -2.14
RNFT1Q5M7Z0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.7□□□□□ -2.14
RNFT1Q5M7Z0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
RNFT1Q5M7Z0 Y_RNA.325-201ENST00000365171 122 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 SNORA8.2-201ENST00000384372 139 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 MIR644A-201ENST00000385262 94 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 SNORA17.3-201ENST00000391159 129 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 RNA5SP338-201ENST00000410495 85 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 RNU6-717P-201ENST00000459076 104 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 SNORD79.1-201ENST00000516069 84 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 RNA5SP364-201ENST00000516938 78 ntBASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
RNFT1Q5M7Z0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 SNORA63.6-201ENST00000364921 119 ntBASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 RNU6-469P-201ENST00000516253 101 ntBASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 SNORA40.16-201ENST00000517238 121 ntBASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 MIR548X-201ENST00000580069 75 ntBASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.68□□□□□ -2.14
RNFT1Q5M7Z0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 RNU1-40P-201ENST00000516816 164 ntBASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 RNU1-97P-201ENST00000516872 164 ntBASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
RNFT1Q5M7Z0 SNORD116-16-201ENST00000384533 92 ntBASIC1.66□□□□□ -2.14
RNFT1Q5M7Z0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.66□□□□□ -2.14
RNFT1Q5M7Z0 RNA5SP47-201ENST00000517230 109 ntBASIC1.66□□□□□ -2.14
RNFT1Q5M7Z0 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
RNFT1Q5M7Z0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RNFT1Q5M7Z0 SNORA25.8-201ENST00000364831 128 ntBASIC1.65□□□□□ -2.15
RNFT1Q5M7Z0 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
RNFT1Q5M7Z0 SNORD116.2-201ENST00000391251 93 ntBASIC1.65□□□□□ -2.15
RNFT1Q5M7Z0 MIR7110-201ENST00000612638 86 ntBASIC1.65□□□□□ -2.15
RNFT1Q5M7Z0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.65□□□□□ -2.15
RNFT1Q5M7Z0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 RNU6-269P-201ENST00000391077 97 ntBASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RNFT1Q5M7Z0 SNORD18A-201ENST00000363753 72 ntBASIC1.63□□□□□ -2.15
RNFT1Q5M7Z0 SNORD12-201ENST00000391002 90 ntBASIC1.63□□□□□ -2.15
RNFT1Q5M7Z0 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
RNFT1Q5M7Z0 AL021921.1-201ENST00000442774 93 ntBASIC1.63□□□□□ -2.15
RNFT1Q5M7Z0 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
RNFT1Q5M7Z0 SNORA9.1-201ENST00000362412 131 ntBASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 Y_RNA.74-201ENST00000362911 99 ntBASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 RNU6-838P-201ENST00000363399 108 ntBASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 RNU6-1246P-201ENST00000391064 107 ntBASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 RNA5SP484-201ENST00000458857 111 ntBASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 MIR4781-201ENST00000585250 76 ntBASIC1.62□□□□□ -2.15
RNFT1Q5M7Z0 RNU6-716P-201ENST00000365621 103 ntBASIC1.61□□□□□ -2.15
RNFT1Q5M7Z0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.61□□□□□ -2.15
RNFT1Q5M7Z0 SNORA40B-201ENST00000385573 128 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 392.6 ms