Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RNU6-617P-201ENST00000516147 107 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 RNU6-473P-201ENST00000516164 107 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 AL513043.2-201ENST00000573941 143 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 YWHAEP2-201ENST00000580066 112 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 MIR548AX-201ENST00000580117 73 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 AC012531.4-201ENST00000616509 177 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 SNORD101-201ENST00000384027 73 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 MIR214-201ENST00000385214 110 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1168P-201ENST00000390831 104 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 RNU6-313P-201ENST00000516317 112 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 MIR4677-201ENST00000584153 80 ntBASIC0.03□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.10-201ENST00000362371 110 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 RNU6-1056P-201ENST00000383996 107 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 SNORA19-201ENST00000384737 128 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 MIR106A-201ENST00000384870 81 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 MIR516B1-201ENST00000385211 90 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 RNA5SP451-201ENST00000410588 110 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 AL606753.1-201ENST00000427435 87 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 RNU6-65P-201ENST00000516332 98 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 RNU6-1057P-201ENST00000517162 102 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 SCARNA11.2-201ENST00000517183 154 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 MIR548AD-201ENST00000584780 82 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 AC084368.1-201ENST00000620935 65 ntBASIC0.02□□□□□ -2.41
PDLIM3Q53GG5 RNU6-664P-201ENST00000362381 107 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 RNA5SP205-201ENST00000364653 136 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 RNU6-813P-201ENST00000384691 107 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 MIR1302-5-201ENST00000408164 150 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 Y_RNA.601-201ENST00000410500 113 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 MIR4696-201ENST00000581431 70 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 MIR4536-1-201ENST00000583537 88 ntBASIC0.01□□□□□ -2.41
PDLIM3Q53GG5 MIRLET7F1-201ENST00000362202 87 ntBASIC0□□□□□ -2.41
PDLIM3Q53GG5 Y_RNA.125-201ENST00000363371 111 ntBASIC0□□□□□ -2.41
PDLIM3Q53GG5 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
PDLIM3Q53GG5 SNORD114-28-201ENST00000363610 72 ntBASIC0□□□□□ -2.41
PDLIM3Q53GG5 MIR4777-201ENST00000583710 86 ntBASIC0□□□□□ -2.41
PDLIM3Q53GG5 MIR3925-201ENST00000584674 77 ntBASIC0□□□□□ -2.41
PDLIM3Q53GG5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0□□□□□ -2.41
PDLIM3Q53GG5 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.01□□□□□ -2.41
PDLIM3Q53GG5 SCARNA23-201ENST00000516060 130 ntBASIC-0.01□□□□□ -2.41
PDLIM3Q53GG5 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
PDLIM3Q53GG5 MIR590-201ENST00000385008 97 ntBASIC-0.02□□□□□ -2.41
PDLIM3Q53GG5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
PDLIM3Q53GG5 SNORA25.13-201ENST00000516395 103 ntBASIC-0.02□□□□□ -2.41
PDLIM3Q53GG5 MIR601-201ENST00000385256 79 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 RNU6-109P-201ENST00000516364 107 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 RNU6-184P-201ENST00000516514 107 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 RNU6-719P-201ENST00000516671 104 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 MIR4439-201ENST00000583746 80 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 AC069503.3-201ENST00000618674 145 ntBASIC-0.03□□□□□ -2.41
PDLIM3Q53GG5 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU6-929P-201ENST00000384429 107 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 MIR1207-201ENST00000408249 87 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU6-554P-201ENST00000410466 106 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU2-51P-201ENST00000410708 197 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 AC093423.1-201ENST00000440817 142 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU7-85P-201ENST00000458851 63 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU6-75P-201ENST00000515944 104 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU6-904P-201ENST00000516206 101 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 RNU6-479P-201ENST00000516348 105 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 U4.2-201ENST00000618561 85 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 uc_338.10-201ENST00000621872 182 ntBASIC-0.04□□□□□ -2.42
PDLIM3Q53GG5 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.05□□□□□ -2.42
PDLIM3Q53GG5 MIR451A-201ENST00000385059 72 ntBASIC-0.05□□□□□ -2.42
PDLIM3Q53GG5 RNU6-644P-201ENST00000391155 98 ntBASIC-0.05□□□□□ -2.42
PDLIM3Q53GG5 MIR548AE1-201ENST00000583292 70 ntBASIC-0.05□□□□□ -2.42
PDLIM3Q53GG5 MIR6514-201ENST00000622549 70 ntBASIC-0.05□□□□□ -2.42
PDLIM3Q53GG5 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 MT-TY-201ENST00000387409 66 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 MIR892B-201ENST00000401279 77 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU6-935P-201ENST00000410371 100 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU6-519P-201ENST00000410590 108 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU7-159P-201ENST00000459284 62 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 FGF7P7-201ENST00000514120 227 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU6-162P-201ENST00000516228 103 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU7-188P-201ENST00000517063 64 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU6-762P-201ENST00000517107 102 ntBASIC-0.06□□□□□ -2.42
PDLIM3Q53GG5 RNU6-106P-201ENST00000384405 107 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 SNORA75.1-201ENST00000391130 148 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 RNU4-61P-201ENST00000411243 107 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 RNU7-61P-201ENST00000515897 61 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 MIR8064-201ENST00000612863 90 ntBASIC-0.07□□□□□ -2.42
PDLIM3Q53GG5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 RNU6-132P-201ENST00000383863 107 ntBASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 RNU6-154P-201ENST00000384306 106 ntBASIC-0.08□□□□□ -2.42
PDLIM3Q53GG5 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 261.8 ms