Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU7-129P-201ENST00000516128 62 ntBASIC0.3□□□□□ -2.36
CCDC144BQ3MJ40 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.3□□□□□ -2.36
CCDC144BQ3MJ40 MIR548U-201ENST00000390728 81 ntBASIC0.29□□□□□ -2.36
CCDC144BQ3MJ40 RNU6-935P-201ENST00000410371 100 ntBASIC0.29□□□□□ -2.36
CCDC144BQ3MJ40 MIR6718-201ENST00000616153 80 ntBASIC0.29□□□□□ -2.36
CCDC144BQ3MJ40 MIR450A1-201ENST00000362262 91 ntBASIC0.28□□□□□ -2.36
CCDC144BQ3MJ40 RNU7-61P-201ENST00000515897 61 ntBASIC0.28□□□□□ -2.36
CCDC144BQ3MJ40 RNU6-75P-201ENST00000515944 104 ntBASIC0.28□□□□□ -2.36
CCDC144BQ3MJ40 MIR4460-201ENST00000577862 86 ntBASIC0.28□□□□□ -2.36
CCDC144BQ3MJ40 AC069503.3-201ENST00000618674 145 ntBASIC0.28□□□□□ -2.36
CCDC144BQ3MJ40 RNU6-652P-201ENST00000365488 107 ntBASIC0.27□□□□□ -2.37
CCDC144BQ3MJ40 AC093423.1-201ENST00000440817 142 ntBASIC0.27□□□□□ -2.37
CCDC144BQ3MJ40 RNU7-85P-201ENST00000458851 63 ntBASIC0.27□□□□□ -2.37
CCDC144BQ3MJ40 MTATP8P2-201ENST00000435212 202 ntBASIC0.26□□□□□ -2.37
CCDC144BQ3MJ40 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CCDC144BQ3MJ40 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
CCDC144BQ3MJ40 SNORD4B-201ENST00000459083 72 ntBASIC0.25□□□□□ -2.37
CCDC144BQ3MJ40 U3.27-201ENST00000391237 200 ntBASIC0.24□□□□□ -2.37
CCDC144BQ3MJ40 SNORA40.13-201ENST00000516379 120 ntBASIC0.24□□□□□ -2.37
CCDC144BQ3MJ40 RNA5SP395-201ENST00000516567 118 ntBASIC0.24□□□□□ -2.37
CCDC144BQ3MJ40 MIR548AD-201ENST00000584780 82 ntBASIC0.24□□□□□ -2.37
CCDC144BQ3MJ40 Y_RNA.125-201ENST00000363371 111 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 RNU6-32P-201ENST00000383948 107 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 RNU6-13P-201ENST00000384248 107 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 RNU6-12P-201ENST00000384604 107 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 RNU6-41P-201ENST00000384741 107 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 MIR892B-201ENST00000401279 77 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 Y_RNA.677-201ENST00000516401 85 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 RNA5SP285-201ENST00000516619 119 ntBASIC0.23□□□□□ -2.37
CCDC144BQ3MJ40 SNORA63.4-201ENST00000362763 126 ntBASIC0.22□□□□□ -2.37
CCDC144BQ3MJ40 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
CCDC144BQ3MJ40 RNU6-127P-201ENST00000390897 107 ntBASIC0.22□□□□□ -2.37
CCDC144BQ3MJ40 RNU6-782P-201ENST00000516852 104 ntBASIC0.22□□□□□ -2.37
CCDC144BQ3MJ40 MIR499B-201ENST00000636498 73 ntBASIC0.22□□□□□ -2.37
CCDC144BQ3MJ40 MIR610-201ENST00000385139 96 ntBASIC0.21□□□□□ -2.38
CCDC144BQ3MJ40 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
CCDC144BQ3MJ40 MIR501-201ENST00000390204 84 ntBASIC0.21□□□□□ -2.38
CCDC144BQ3MJ40 RNU6-1232P-201ENST00000516299 86 ntBASIC0.21□□□□□ -2.38
CCDC144BQ3MJ40 U7.3-201ENST00000616123 62 ntBASIC0.21□□□□□ -2.38
CCDC144BQ3MJ40 AP001318.4-201ENST00000616637 121 ntBASIC0.21□□□□□ -2.38
CCDC144BQ3MJ40 RNU6-44P-201ENST00000384045 107 ntBASIC0.2□□□□□ -2.38
CCDC144BQ3MJ40 MT-TY-201ENST00000387409 66 ntBASIC0.2□□□□□ -2.38
CCDC144BQ3MJ40 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
CCDC144BQ3MJ40 YWHAEP2-201ENST00000580066 112 ntBASIC0.2□□□□□ -2.38
CCDC144BQ3MJ40 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.2□□□□□ -2.38
CCDC144BQ3MJ40 RNU6-811P-201ENST00000384069 107 ntBASIC0.19□□□□□ -2.38
CCDC144BQ3MJ40 MIR4677-201ENST00000584153 80 ntBASIC0.19□□□□□ -2.38
CCDC144BQ3MJ40 MIR4743-201ENST00000584576 69 ntBASIC0.19□□□□□ -2.38
CCDC144BQ3MJ40 MIRLET7F1-201ENST00000362202 87 ntBASIC0.18□□□□□ -2.38
CCDC144BQ3MJ40 RNU6-35P-201ENST00000384530 107 ntBASIC0.18□□□□□ -2.38
CCDC144BQ3MJ40 MIR451A-201ENST00000385059 72 ntBASIC0.18□□□□□ -2.38
CCDC144BQ3MJ40 RNA5SP299-201ENST00000391203 116 ntBASIC0.18□□□□□ -2.38
CCDC144BQ3MJ40 HMGN2P22-201ENST00000427588 175 ntBASIC0.18□□□□□ -2.38
CCDC144BQ3MJ40 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.18□□□□□ -2.38
CCDC144BQ3MJ40 RNU6-147P-201ENST00000383983 107 ntBASIC0.17□□□□□ -2.38
CCDC144BQ3MJ40 Y_RNA.660-201ENST00000516002 120 ntBASIC0.17□□□□□ -2.38
CCDC144BQ3MJ40 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.17□□□□□ -2.38
CCDC144BQ3MJ40 MIR3064-201ENST00000581130 66 ntBASIC0.17□□□□□ -2.38
CCDC144BQ3MJ40 AC104996.3-201ENST00000590718 94 ntBASIC0.17□□□□□ -2.38
CCDC144BQ3MJ40 uc_338.10-201ENST00000621872 182 ntBASIC0.17□□□□□ -2.38
CCDC144BQ3MJ40 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
CCDC144BQ3MJ40 Y_RNA.495-201ENST00000384435 112 ntBASIC0.15□□□□□ -2.39
CCDC144BQ3MJ40 MIR329-2-201ENST00000385029 84 ntBASIC0.15□□□□□ -2.39
CCDC144BQ3MJ40 SNORA75.1-201ENST00000391130 148 ntBASIC0.15□□□□□ -2.39
CCDC144BQ3MJ40 RNU6-162P-201ENST00000516228 103 ntBASIC0.15□□□□□ -2.39
CCDC144BQ3MJ40 MIR5190-201ENST00000581537 80 ntBASIC0.15□□□□□ -2.39
CCDC144BQ3MJ40 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.15□□□□□ -2.39
CCDC144BQ3MJ40 Y_RNA.491-201ENST00000384417 107 ntBASIC0.14□□□□□ -2.39
CCDC144BQ3MJ40 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CCDC144BQ3MJ40 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
CCDC144BQ3MJ40 MIR548O2-201ENST00000616090 70 ntBASIC0.14□□□□□ -2.39
CCDC144BQ3MJ40 MIR371B-201ENST00000638082 66 ntBASIC0.14□□□□□ -2.39
CCDC144BQ3MJ40 RNY4P3-201ENST00000365254 95 ntBASIC0.13□□□□□ -2.39
CCDC144BQ3MJ40 RNU6-132P-201ENST00000383863 107 ntBASIC0.13□□□□□ -2.39
CCDC144BQ3MJ40 Y_RNA.609-201ENST00000410669 89 ntBASIC0.13□□□□□ -2.39
CCDC144BQ3MJ40 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
CCDC144BQ3MJ40 AC084368.1-201ENST00000620935 65 ntBASIC0.13□□□□□ -2.39
CCDC144BQ3MJ40 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
CCDC144BQ3MJ40 MIR643-201ENST00000385267 97 ntBASIC0.12□□□□□ -2.39
CCDC144BQ3MJ40 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CCDC144BQ3MJ40 Y_RNA.407-201ENST00000383986 113 ntBASIC0.11□□□□□ -2.39
CCDC144BQ3MJ40 AC026421.1-201ENST00000519101 163 ntBASIC0.11□□□□□ -2.39
CCDC144BQ3MJ40 MIR4473-201ENST00000583731 91 ntBASIC0.11□□□□□ -2.39
CCDC144BQ3MJ40 Y_RNA.290-201ENST00000364879 114 ntBASIC0.1□□□□□ -2.39
CCDC144BQ3MJ40 MIR516B1-201ENST00000385211 90 ntBASIC0.1□□□□□ -2.39
CCDC144BQ3MJ40 RNU5B-6P-201ENST00000516765 68 ntBASIC0.1□□□□□ -2.39
CCDC144BQ3MJ40 Y_RNA.190-201ENST00000363964 101 ntBASIC0.09□□□□□ -2.4
CCDC144BQ3MJ40 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.09□□□□□ -2.4
CCDC144BQ3MJ40 SNORA63.2-201ENST00000362603 126 ntBASIC0.08□□□□□ -2.4
CCDC144BQ3MJ40 RNU4-32P-201ENST00000363404 141 ntBASIC0.08□□□□□ -2.4
CCDC144BQ3MJ40 MIR1236-201ENST00000408340 102 ntBASIC0.08□□□□□ -2.4
CCDC144BQ3MJ40 MTATP6P29-201ENST00000415057 132 ntBASIC0.08□□□□□ -2.4
CCDC144BQ3MJ40 FGF7P7-201ENST00000514120 227 ntBASIC0.08□□□□□ -2.4
CCDC144BQ3MJ40 Y_RNA.348-201ENST00000365403 103 ntBASIC0.07□□□□□ -2.4
CCDC144BQ3MJ40 RNU6V-201ENST00000384105 107 ntBASIC0.07□□□□□ -2.4
CCDC144BQ3MJ40 SCARNA11.2-201ENST00000517183 154 ntBASIC0.07□□□□□ -2.4
CCDC144BQ3MJ40 SNORA18.5-201ENST00000516616 101 ntBASIC0.06□□□□□ -2.4
CCDC144BQ3MJ40 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.06□□□□□ -2.4
CCDC144BQ3MJ40 MIR3925-201ENST00000584674 77 ntBASIC0.06□□□□□ -2.4
CCDC144BQ3MJ40 MALAT1.1-201ENST00000618249 95 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms