Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU7-107P-201ENST00000459121 61 ntBASIC-0.57□□□□□ -2.5
RFX4Q33E94 RNU7-200P-201ENST00000516105 62 ntBASIC-0.57□□□□□ -2.5
RFX4Q33E94 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.57□□□□□ -2.5
RFX4Q33E94 MIR582-201ENST00000365731 98 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 SNORA3B-201ENST00000391305 131 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 RNU6-65P-201ENST00000516332 98 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 RNU6-762P-201ENST00000517107 102 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 MIR4679-2-201ENST00000578358 77 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 MIR4636-201ENST00000582271 80 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 RNU6-86P-201ENST00000606534 107 ntBASIC-0.58□□□□□ -2.5
RFX4Q33E94 AL157777.2-201ENST00000258070 137 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 SNORD115-25-201ENST00000362619 82 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 SNORD50.2-201ENST00000365465 70 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 MIR224-201ENST00000384889 81 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 Z95118.1-201ENST00000421372 247 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 RNU7-85P-201ENST00000458851 63 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 MIR4536-1-201ENST00000583537 88 ntBASIC-0.59□□□□□ -2.5
RFX4Q33E94 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 RNY3P2-201ENST00000362918 102 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 SNORA40-201ENST00000388090 126 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 AC097510.1-201ENST00000510945 133 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 RNU6-758P-201ENST00000516292 89 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 AL513043.2-201ENST00000573941 143 ntBASIC-0.6□□□□□ -2.51
RFX4Q33E94 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 MIR204-201ENST00000385200 110 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 MIR548E-201ENST00000408287 88 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 AL445193.1-201ENST00000441183 141 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 SNORD42B-201ENST00000458893 67 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 RNU6-346P-201ENST00000516288 111 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 RNU6-255P-201ENST00000516957 105 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 AC068339.1-201ENST00000526965 141 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 MIR4439-201ENST00000583746 80 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.61□□□□□ -2.51
RFX4Q33E94 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.62□□□□□ -2.51
RFX4Q33E94 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.62□□□□□ -2.51
RFX4Q33E94 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.62□□□□□ -2.51
RFX4Q33E94 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
RFX4Q33E94 RNU6-132P-201ENST00000383863 107 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 snoU13.13-201ENST00000458842 104 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 RNU7-55P-201ENST00000459426 62 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 RNU6-719P-201ENST00000516671 104 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 RNU6-971P-201ENST00000516920 106 ntBASIC-0.63□□□□□ -2.51
RFX4Q33E94 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 SNORD45B-201ENST00000364617 72 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 RNY1P7-201ENST00000384743 110 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 MIR196A1-201ENST00000388006 70 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 RNU4-63P-201ENST00000411313 118 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 FGF7P7-201ENST00000514120 227 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 AC108676.2-201ENST00000605225 163 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 MIR3914-2-201ENST00000637339 95 ntBASIC-0.64□□□□□ -2.51
RFX4Q33E94 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
RFX4Q33E94 MIR548U-201ENST00000390728 81 ntBASIC-0.65□□□□□ -2.51
RFX4Q33E94 snosnR66.1-201ENST00000391095 99 ntBASIC-0.65□□□□□ -2.51
RFX4Q33E94 SCARNA17-201ENST00000516183 144 ntBASIC-0.65□□□□□ -2.51
RFX4Q33E94 SNORD33.1-201ENST00000516213 88 ntBASIC-0.65□□□□□ -2.51
RFX4Q33E94 AC090425.1-201ENST00000610007 140 ntBASIC-0.65□□□□□ -2.51
RFX4Q33E94 RNA5SP368-201ENST00000364298 116 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 MIR548A1-201ENST00000385041 97 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 MIR1265-201ENST00000408444 86 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 MIR5009-201ENST00000578736 100 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 AC103810.7-201ENST00000607821 91 ntBASIC-0.66□□□□□ -2.52
RFX4Q33E94 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 RNY1P5-201ENST00000383890 115 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 RNU6-881P-201ENST00000516813 102 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 MIR548Z-201ENST00000584743 97 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 MIR6851-201ENST00000617060 67 ntBASIC-0.67□□□□□ -2.52
RFX4Q33E94 RNU4-36P-201ENST00000364294 144 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 RNU6-973P-201ENST00000364690 107 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 MT-TQ-201ENST00000387372 72 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 RNU6-644P-201ENST00000391155 98 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
RFX4Q33E94 AL500527.2-201ENST00000454105 95 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.68□□□□□ -2.52
RFX4Q33E94 MIR3064-201ENST00000581130 66 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 MIR3140-201ENST00000583685 90 ntBASIC-0.68□□□□□ -2.52
RFX4Q33E94 RNU6-502P-201ENST00000362419 108 ntBASIC-0.69□□□□□ -2.52
RFX4Q33E94 RNU6-35P-201ENST00000384530 107 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms